RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 HECW2Q9P2P5 1572 aa27.44■■□□□ 1.98
CROCCP3-203ENST00000589964 CDK11AQ9UQ88 783 aaPredicted RBP27.43■■□□□ 1.98
CROCCP3-203ENST00000589964 BCORL1Q5H9F3 1711 aa27.43■■□□□ 1.98
CROCCP3-203ENST00000589964 CCDC18Q5T9S5 1454 aa27.42■■□□□ 1.98
CROCCP3-203ENST00000589964 ARHGAP5Q13017 1502 aa27.41■■□□□ 1.98
CROCCP3-203ENST00000589964 ZFYVE16Q7Z3T8 1539 aa27.41■■□□□ 1.98
CROCCP3-203ENST00000589964 MADDQ8WXG6 1647 aa27.41■■□□□ 1.98
CROCCP3-203ENST00000589964 CDC42BPBQ9Y5S2 1711 aa27.4■■□□□ 1.98
CROCCP3-203ENST00000589964 ARID4BQ4LE39 1312 aaPredicted RBP27.39■■□□□ 1.97
CROCCP3-203ENST00000589964 EFCAB2Q5VUJ9 269 aa27.38■■□□□ 1.97
CROCCP3-203ENST00000589964 PTPRMP28827 1452 aa27.38■■□□□ 1.97
CROCCP3-203ENST00000589964 ARHGEF12Q9NZN5 1544 aa27.37■■□□□ 1.97
CROCCP3-203ENST00000589964 CEP162Q5TB80 1403 aa27.35■■□□□ 1.97
CROCCP3-203ENST00000589964 PREX2Q70Z35 1606 aa27.35■■□□□ 1.97
CROCCP3-203ENST00000589964 AFAP1Q8N556 730 aa27.34■■□□□ 1.97
CROCCP3-203ENST00000589964 LOC105371045A0A1W2PR82 267 aa27.33■■□□□ 1.97
CROCCP3-203ENST00000589964 CDC42BPAQ5VT25 1732 aa27.32■■□□□ 1.96
CROCCP3-203ENST00000589964 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
CROCCP3-203ENST00000589964 MAGI2Q86UL8 1455 aa27.3■■□□□ 1.96
CROCCP3-203ENST00000589964 RIMS1Q86UR5 1692 aaKnown RBP27.3■■□□□ 1.96
CROCCP3-203ENST00000589964 ABCC1P33527 1531 aa27.29■■□□□ 1.96
CROCCP3-203ENST00000589964 KDM5CP41229 1560 aa27.29■■□□□ 1.96
CROCCP3-203ENST00000589964 MLECQ14165 292 aa27.26■■□□□ 1.95
CROCCP3-203ENST00000589964 ZNF518AQ6AHZ1 1483 aa27.25■■□□□ 1.95
CROCCP3-203ENST00000589964 GPATCH8Q9UKJ3 1502 aaKnown RBP27.24■■□□□ 1.95
CROCCP3-203ENST00000589964 SAMD9LQ8IVG5 1584 aa27.23■■□□□ 1.95
CROCCP3-203ENST00000589964 ATP10AO60312 1499 aa27.23■■□□□ 1.95
CROCCP3-203ENST00000589964 ITSN2Q9NZM3 1697 aa27.23■■□□□ 1.95
CROCCP3-203ENST00000589964 DIP2CQ9Y2E4 1556 aa27.22■■□□□ 1.95
CROCCP3-203ENST00000589964 ABCA6Q8N139 1617 aa27.22■■□□□ 1.95
CROCCP3-203ENST00000589964 C9orf84Q5VXU9 1444 aa27.2■■□□□ 1.94
CROCCP3-203ENST00000589964 PLPPR3Q6T4P5 718 aa27.2■■□□□ 1.94
CROCCP3-203ENST00000589964 ZNF777Q9ULD5 760 aaPredicted RBP27.17■■□□□ 1.94
CROCCP3-203ENST00000589964 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
CROCCP3-203ENST00000589964 MTUS2Q5JR59 1369 aa27.14■■□□□ 1.94
CROCCP3-203ENST00000589964 LMTK3Q96Q04 1460 aa27.13■■□□□ 1.93
CROCCP3-203ENST00000589964 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
CROCCP3-203ENST00000589964 FER1L4A9Z1Z3 1794 aa27.13■■□□□ 1.93
CROCCP3-203ENST00000589964 KIDINS220Q9ULH0 1771 aa27.13■■□□□ 1.93
CROCCP3-203ENST00000589964 TIAM1Q13009 1591 aa27.13■■□□□ 1.93
CROCCP3-203ENST00000589964 HNRNPMP52272 730 aaKnown RBP eCLIP27.11■■□□□ 1.93
CROCCP3-203ENST00000589964 ZNF644Q9H582 1327 aaPredicted RBP27.11■■□□□ 1.93
CROCCP3-203ENST00000589964 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
CROCCP3-203ENST00000589964 EHBP1L1Q8N3D4 1523 aa27.09■■□□□ 1.93
CROCCP3-203ENST00000589964 CCNB3Q8WWL7 1395 aa27.09■■□□□ 1.93
CROCCP3-203ENST00000589964 CEBPAP49715 358 aaPredicted RBP27.06■■□□□ 1.92
CROCCP3-203ENST00000589964 CFDP1Q9UEE9 299 aaPredicted RBP27.05■■□□□ 1.92
CROCCP3-203ENST00000589964 REREQ9P2R6 1566 aa27.05■■□□□ 1.92
CROCCP3-203ENST00000589964 HSPA2P54652 639 aa27.03■■□□□ 1.92
CROCCP3-203ENST00000589964 VPS8Q8N3P4 1428 aa27■■□□□ 1.91
CROCCP3-203ENST00000589964 INO80Q9ULG1 1556 aaPredicted RBP26.99■■□□□ 1.91
CROCCP3-203ENST00000589964 NCOA2Q15596 1464 aa26.99■■□□□ 1.91
CROCCP3-203ENST00000589964 AGLP35573 1532 aa26.98■■□□□ 1.91
CROCCP3-203ENST00000589964 KIAA1107Q9UPP5 1409 aa26.98■■□□□ 1.91
CROCCP3-203ENST00000589964 MBD5Q9P267 1494 aa26.97■■□□□ 1.91
CROCCP3-203ENST00000589964 ATP7AQ04656 1500 aa26.96■■□□□ 1.91
CROCCP3-203ENST00000589964 SPAG9O60271 1321 aaKnown RBP26.96■■□□□ 1.91
CROCCP3-203ENST00000589964 ILDR1Q86SU0 546 aaPredicted RBP26.94■■□□□ 1.9
CROCCP3-203ENST00000589964 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
CROCCP3-203ENST00000589964 PLEKHH2Q8IVE3 1493 aa26.92■■□□□ 1.9
CROCCP3-203ENST00000589964 SUPT6HQ7KZ85 1726 aaKnown RBP26.9■■□□□ 1.9
CROCCP3-203ENST00000589964 PLXNC1O60486 1568 aa26.89■■□□□ 1.9
CROCCP3-203ENST00000589964 LRRC9Q6ZRR7 1453 aa26.89■■□□□ 1.9
CROCCP3-203ENST00000589964 C3P01024 1663 aa26.89■■□□□ 1.89
CROCCP3-203ENST00000589964 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
CROCCP3-203ENST00000589964 A2MP01023 1474 aa26.85■■□□□ 1.89
CROCCP3-203ENST00000589964 PREX1Q8TCU6 1659 aa26.82■■□□□ 1.88
CROCCP3-203ENST00000589964 ADGBQ8N7X0 1667 aa26.78■■□□□ 1.88
CROCCP3-203ENST00000589964 CCDC141Q6ZP82 1450 aa26.77■■□□□ 1.88
CROCCP3-203ENST00000589964 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
CROCCP3-203ENST00000589964 CLTCQ00610 1675 aaKnown RBP26.74■■□□□ 1.87
CROCCP3-203ENST00000589964 RTEL1-TNFRSF6BF6WH68 1400 aa26.72■■□□□ 1.87
CROCCP3-203ENST00000589964 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
CROCCP3-203ENST00000589964 GGT6Q6P531 493 aa26.71■■□□□ 1.87
CROCCP3-203ENST00000589964 UHRF1BP1Q6BDS2 1440 aa26.71■■□□□ 1.87
CROCCP3-203ENST00000589964 CNTLNQ9NXG0 1405 aa26.71■■□□□ 1.87
CROCCP3-203ENST00000589964 ZMYM3Q14202 1370 aa26.7■■□□□ 1.86
CROCCP3-203ENST00000589964 ARHGEF5Q12774 1597 aa26.69■■□□□ 1.86
CROCCP3-203ENST00000589964 MROH2AA6NES4 1674 aa26.69■■□□□ 1.86
CROCCP3-203ENST00000589964 ESF1Q9H501 851 aaKnown RBP26.68■■□□□ 1.86
CROCCP3-203ENST00000589964 MYOM3Q5VTT5 1437 aa26.67■■□□□ 1.86
CROCCP3-203ENST00000589964 DHX29Q7Z478 1369 aaKnown RBP26.67■■□□□ 1.86
CROCCP3-203ENST00000589964 SETD1BQ9UPS6 1966 aaKnown RBP26.64■■□□□ 1.86
CROCCP3-203ENST00000589964 PTPRKQ15262 1439 aa26.64■■□□□ 1.85
CROCCP3-203ENST00000589964 KIF3BO15066 747 aa26.61■■□□□ 1.85
CROCCP3-203ENST00000589964 NPATQ14207 1427 aa26.6■■□□□ 1.85
CROCCP3-203ENST00000589964 MIA2Q96PC5 1412 aa26.57■■□□□ 1.84
CROCCP3-203ENST00000589964 MAST1Q9Y2H9 1570 aa26.57■■□□□ 1.84
CROCCP3-203ENST00000589964 MYO3AQ8NEV4 1616 aa26.57■■□□□ 1.84
CROCCP3-203ENST00000589964 FBXO31Q5XUX0 539 aaPredicted RBP26.54■■□□□ 1.84
CROCCP3-203ENST00000589964 NCOA1Q15788 1441 aa26.54■■□□□ 1.84
CROCCP3-203ENST00000589964 ABCC5O15440 1437 aa26.52■■□□□ 1.84
CROCCP3-203ENST00000589964 RSPH4AQ5TD94 716 aa26.52■■□□□ 1.84
CROCCP3-203ENST00000589964 FBXO41Q8TF61 875 aa26.52■■□□□ 1.84
CROCCP3-203ENST00000589964 PTPN23Q9H3S7 1636 aa26.52■■□□□ 1.84
CROCCP3-203ENST00000589964 CAMSAP1Q5T5Y3 1602 aa26.51■■□□□ 1.83
CROCCP3-203ENST00000589964 MROH1Q8NDA8 1641 aa26.5■■□□□ 1.83
CROCCP3-203ENST00000589964 KDM5DQ9BY66 1539 aa26.5■■□□□ 1.83
CROCCP3-203ENST00000589964 TSPY4P0CV99 314 aa26.5■■□□□ 1.83
CROCCP3-203ENST00000589964 TSPY10P0CW01 314 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms