RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CDC42BPBQ9Y5S2 1711 aa26.24■■□□□ 1.79
CXXC1-212ENST00000589940 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
CXXC1-212ENST00000589940 ABCA9Q8IUA7 1624 aa26.22■■□□□ 1.79
CXXC1-212ENST00000589940 PLCH2O75038 1416 aa26.22■■□□□ 1.79
CXXC1-212ENST00000589940 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.78
CXXC1-212ENST00000589940 PTPRKQ15262 1439 aa26.19■■□□□ 1.78
CXXC1-212ENST00000589940 ARAP3Q8WWN8 1544 aa26.17■■□□□ 1.78
CXXC1-212ENST00000589940 DNMT1P26358 1616 aaKnown RBP26.17■■□□□ 1.78
CXXC1-212ENST00000589940 DAPK1P53355 1430 aa26.16■■□□□ 1.78
CXXC1-212ENST00000589940 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
CXXC1-212ENST00000589940 ABCC5O15440 1437 aa26.14■■□□□ 1.78
CXXC1-212ENST00000589940 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
CXXC1-212ENST00000589940 PLEKHH2Q8IVE3 1493 aa26.09■■□□□ 1.77
CXXC1-212ENST00000589940 SETD5Q9C0A6 1442 aa26.08■■□□□ 1.77
CXXC1-212ENST00000589940 MBD5Q9P267 1494 aa26.08■■□□□ 1.77
CXXC1-212ENST00000589940 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.76
CXXC1-212ENST00000589940 ARHGEF5Q12774 1597 aa26.07■■□□□ 1.76
CXXC1-212ENST00000589940 HFM1A2PYH4 1435 aa26.07■■□□□ 1.76
CXXC1-212ENST00000589940 CHIC2Q9UKJ5 165 aa26.06■■□□□ 1.76
CXXC1-212ENST00000589940 CD109Q6YHK3 1445 aa26.06■■□□□ 1.76
CXXC1-212ENST00000589940 AKNAQ7Z591 1439 aa26.06■■□□□ 1.76
CXXC1-212ENST00000589940 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.76
CXXC1-212ENST00000589940 FANCAO15360 1455 aa26.05■■□□□ 1.76
CXXC1-212ENST00000589940 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
CXXC1-212ENST00000589940 SYCP2Q9BX26 1530 aa26.05■■□□□ 1.76
CXXC1-212ENST00000589940 GLI2P10070 1586 aa26.04■■□□□ 1.76
CXXC1-212ENST00000589940 ROCK1Q13464 1354 aa26.04■■□□□ 1.76
CXXC1-212ENST00000589940 RSPH4AQ5TD94 716 aa26.03■■□□□ 1.76
CXXC1-212ENST00000589940 RAB3GAP2Q9H2M9 1393 aa26.03■■□□□ 1.76
CXXC1-212ENST00000589940 SHANK2Q9UPX8 1470 aa26.03■■□□□ 1.76
CXXC1-212ENST00000589940 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
CXXC1-212ENST00000589940 ABCC1P33527 1531 aa26.02■■□□□ 1.76
CXXC1-212ENST00000589940 DNAJC5Q9H3Z4 198 aa26.02■■□□□ 1.76
CXXC1-212ENST00000589940 NAIPQ13075 1403 aa26.02■■□□□ 1.76
CXXC1-212ENST00000589940 DIP2BQ9P265 1576 aa26.01■■□□□ 1.75
CXXC1-212ENST00000589940 ARHGEF12Q9NZN5 1544 aa25.99■■□□□ 1.75
CXXC1-212ENST00000589940 ADGRL2O95490 1459 aa25.98■■□□□ 1.75
CXXC1-212ENST00000589940 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
CXXC1-212ENST00000589940 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
CXXC1-212ENST00000589940 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
CXXC1-212ENST00000589940 C9orf84Q5VXU9 1444 aa25.97■■□□□ 1.75
CXXC1-212ENST00000589940 MAP3K4Q9Y6R4 1608 aa25.97■■□□□ 1.75
CXXC1-212ENST00000589940 HRCP23327 699 aa25.97■■□□□ 1.75
CXXC1-212ENST00000589940 ADGBQ8N7X0 1667 aa25.97■■□□□ 1.75
CXXC1-212ENST00000589940 GCC2Q8IWJ2 1684 aa25.96■■□□□ 1.75
CXXC1-212ENST00000589940 FAM69CQ0P6D2 419 aa25.95■■□□□ 1.75
CXXC1-212ENST00000589940 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.75
CXXC1-212ENST00000589940 CFAP74Q9C0B2 1584 aa25.95■■□□□ 1.74
CXXC1-212ENST00000589940 NCOA1Q15788 1441 aa25.95■■□□□ 1.74
CXXC1-212ENST00000589940 ADGRL1O94910 1474 aa25.93■■□□□ 1.74
CXXC1-212ENST00000589940 ANKRD30AQ9BXX3 1397 aa25.93■■□□□ 1.74
CXXC1-212ENST00000589940 MAST1Q9Y2H9 1570 aa25.9■■□□□ 1.74
CXXC1-212ENST00000589940 TRAPPC8Q9Y2L5 1435 aa25.9■■□□□ 1.74
CXXC1-212ENST00000589940 NEO1Q92859 1461 aa25.9■■□□□ 1.74
CXXC1-212ENST00000589940 SCAPERQ9BY12 1400 aa25.89■■□□□ 1.73
CXXC1-212ENST00000589940 DHX57Q6P158 1386 aaKnown RBP25.86■■□□□ 1.73
CXXC1-212ENST00000589940 AFAP1Q8N556 730 aa25.83■■□□□ 1.72
CXXC1-212ENST00000589940 KIF13AQ9H1H9 1805 aa25.83■■□□□ 1.72
CXXC1-212ENST00000589940 KDM6BO15054 1643 aa25.83■■□□□ 1.72
CXXC1-212ENST00000589940 KIF15Q9NS87 1388 aa25.82■■□□□ 1.72
CXXC1-212ENST00000589940 PLXNC1O60486 1568 aa25.81■■□□□ 1.72
CXXC1-212ENST00000589940 SPAG9O60271 1321 aaKnown RBP25.8■■□□□ 1.72
CXXC1-212ENST00000589940 RTEL1-TNFRSF6BF6WH68 1400 aa25.79■■□□□ 1.72
CXXC1-212ENST00000589940 ZNF518AQ6AHZ1 1483 aa25.79■■□□□ 1.72
CXXC1-212ENST00000589940 ANKRD50Q9ULJ7 1429 aa25.78■■□□□ 1.72
CXXC1-212ENST00000589940 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
CXXC1-212ENST00000589940 ACIN1Q9UKV3 1341 aaKnown RBP25.78■■□□□ 1.72
CXXC1-212ENST00000589940 TEX14Q8IWB6 1497 aa25.78■■□□□ 1.72
CXXC1-212ENST00000589940 PPRC1Q5VV67 1664 aaKnown RBP25.77■■□□□ 1.72
CXXC1-212ENST00000589940 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
CXXC1-212ENST00000589940 ZEB1P37275 1124 aaPredicted RBP25.75■■□□□ 1.71
CXXC1-212ENST00000589940 TSPOAP1O95153 1857 aa25.75■■□□□ 1.71
CXXC1-212ENST00000589940 INO80Q9ULG1 1556 aaPredicted RBP25.74■■□□□ 1.71
CXXC1-212ENST00000589940 DENND4BO75064 1496 aaPredicted RBP25.74■■□□□ 1.71
CXXC1-212ENST00000589940 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
CXXC1-212ENST00000589940 CLSPNQ9HAW4 1339 aa25.73■■□□□ 1.71
CXXC1-212ENST00000589940 KDM5CP41229 1560 aa25.73■■□□□ 1.71
CXXC1-212ENST00000589940 DUOX2Q9NRD8 1548 aa25.7■■□□□ 1.71
CXXC1-212ENST00000589940 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
CXXC1-212ENST00000589940 MLH3Q9UHC1 1453 aa25.67■■□□□ 1.7
CXXC1-212ENST00000589940 ERBINQ96RT1 1412 aa25.66■■□□□ 1.7
CXXC1-212ENST00000589940 RAPGEF3O95398 923 aa25.65■■□□□ 1.7
CXXC1-212ENST00000589940 RICTORQ6R327 1708 aa25.65■■□□□ 1.7
CXXC1-212ENST00000589940 MYT1LQ9UL68 1186 aa25.65■■□□□ 1.7
CXXC1-212ENST00000589940 KIDINS220Q9ULH0 1771 aa25.65■■□□□ 1.7
CXXC1-212ENST00000589940 HECW2Q9P2P5 1572 aa25.64■■□□□ 1.7
CXXC1-212ENST00000589940 FRMPD1Q5SYB0 1578 aa25.6■■□□□ 1.69
CXXC1-212ENST00000589940 MPHOSPH9Q99550 1183 aa25.59■■□□□ 1.69
CXXC1-212ENST00000589940 KDM5DQ9BY66 1539 aa25.56■■□□□ 1.68
CXXC1-212ENST00000589940 PZPP20742 1482 aa25.56■■□□□ 1.68
CXXC1-212ENST00000589940 DHX29Q7Z478 1369 aaKnown RBP25.56■■□□□ 1.68
CXXC1-212ENST00000589940 ZMYM4Q5VZL5 1548 aa25.56■■□□□ 1.68
CXXC1-212ENST00000589940 TRHP20396 242 aaPredicted RBP25.56■■□□□ 1.68
CXXC1-212ENST00000589940 NUP155O75694 1391 aa25.55■■□□□ 1.68
CXXC1-212ENST00000589940 UNC13BO14795 1591 aa25.55■■□□□ 1.68
CXXC1-212ENST00000589940 SLC4A1APQ9BWU0 796 aaKnown RBP25.53■■□□□ 1.68
CXXC1-212ENST00000589940 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
CXXC1-212ENST00000589940 A2MP01023 1474 aa25.52■■□□□ 1.68
CXXC1-212ENST00000589940 MAGI2Q86UL8 1455 aa25.51■■□□□ 1.67
CXXC1-212ENST00000589940 EIF2AK4Q9P2K8 1649 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms