RNA–Protein interactions for RNA: ENST00000589877.5

SMAD2-211, Transcript of SMAD family member 2, humanhuman

TSL 3

Gene SMAD2, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD2-211ENST00000589877 CLIP1P30622 1438 aa27.32■■□□□ 1.96
SMAD2-211ENST00000589877 CASKIN1Q8WXD9 1431 aa27.32■■□□□ 1.96
SMAD2-211ENST00000589877 YEATS2Q9ULM3 1422 aa27.32■■□□□ 1.96
SMAD2-211ENST00000589877 POGZQ7Z3K3 1410 aa27.3■■□□□ 1.96
SMAD2-211ENST00000589877 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
SMAD2-211ENST00000589877 MADDQ8WXG6 1647 aa27.28■■□□□ 1.96
SMAD2-211ENST00000589877 PCF11O94913 1555 aaKnown RBP27.25■■□□□ 1.95
SMAD2-211ENST00000589877 CCDC18Q5T9S5 1454 aa27.25■■□□□ 1.95
SMAD2-211ENST00000589877 ARHGAP5Q13017 1502 aa27.23■■□□□ 1.95
SMAD2-211ENST00000589877 SIGLEC1Q9BZZ2 1709 aa27.21■■□□□ 1.95
SMAD2-211ENST00000589877 AFAP1Q8N556 730 aa27.21■■□□□ 1.95
SMAD2-211ENST00000589877 ATP10AO60312 1499 aa27.19■■□□□ 1.94
SMAD2-211ENST00000589877 RIMS1Q86UR5 1692 aaKnown RBP27.18■■□□□ 1.94
SMAD2-211ENST00000589877 MLECQ14165 292 aa27.18■■□□□ 1.94
SMAD2-211ENST00000589877 ILDR1Q86SU0 546 aaPredicted RBP27.18■■□□□ 1.94
SMAD2-211ENST00000589877 CDC42BPBQ9Y5S2 1711 aa27.18■■□□□ 1.94
SMAD2-211ENST00000589877 FYCO1Q9BQS8 1478 aa27.18■■□□□ 1.94
SMAD2-211ENST00000589877 ZNF518AQ6AHZ1 1483 aa27.17■■□□□ 1.94
SMAD2-211ENST00000589877 C9orf84Q5VXU9 1444 aa27.14■■□□□ 1.93
SMAD2-211ENST00000589877 PLPPR3Q6T4P5 718 aa27.12■■□□□ 1.93
SMAD2-211ENST00000589877 KDM5CP41229 1560 aa27.11■■□□□ 1.93
SMAD2-211ENST00000589877 MYT1LQ9UL68 1186 aa27.11■■□□□ 1.93
SMAD2-211ENST00000589877 PREX2Q70Z35 1606 aa27.1■■□□□ 1.93
SMAD2-211ENST00000589877 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
SMAD2-211ENST00000589877 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
SMAD2-211ENST00000589877 TRAPPC8Q9Y2L5 1435 aa27.06■■□□□ 1.92
SMAD2-211ENST00000589877 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
SMAD2-211ENST00000589877 MLH3Q9UHC1 1453 aa27.05■■□□□ 1.92
SMAD2-211ENST00000589877 FER1L4A9Z1Z3 1794 aa27.04■■□□□ 1.92
SMAD2-211ENST00000589877 ABCC1P33527 1531 aa27.04■■□□□ 1.92
SMAD2-211ENST00000589877 ZNF777Q9ULD5 760 aaPredicted RBP27.02■■□□□ 1.92
SMAD2-211ENST00000589877 DIP2CQ9Y2E4 1556 aa27.01■■□□□ 1.91
SMAD2-211ENST00000589877 GPATCH8Q9UKJ3 1502 aaKnown RBP27■■□□□ 1.91
SMAD2-211ENST00000589877 ITSN2Q9NZM3 1697 aa27■■□□□ 1.91
SMAD2-211ENST00000589877 HSPA2P54652 639 aa26.98■■□□□ 1.91
SMAD2-211ENST00000589877 REREQ9P2R6 1566 aa26.97■■□□□ 1.91
SMAD2-211ENST00000589877 CEBPAP49715 358 aaPredicted RBP26.96■■□□□ 1.91
SMAD2-211ENST00000589877 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
SMAD2-211ENST00000589877 MTUS2Q5JR59 1369 aa26.95■■□□□ 1.9
SMAD2-211ENST00000589877 HNRNPMP52272 730 aaKnown RBP eCLIP26.94■■□□□ 1.92e-6■■■□□ 15.8
SMAD2-211ENST00000589877 CFDP1Q9UEE9 299 aaPredicted RBP26.94■■□□□ 1.9
SMAD2-211ENST00000589877 SAMD9LQ8IVG5 1584 aa26.93■■□□□ 1.9
SMAD2-211ENST00000589877 CEP162Q5TB80 1403 aa26.92■■□□□ 1.9
SMAD2-211ENST00000589877 KIDINS220Q9ULH0 1771 aa26.92■■□□□ 1.9
SMAD2-211ENST00000589877 CCNB3Q8WWL7 1395 aa26.92■■□□□ 1.9
SMAD2-211ENST00000589877 AGLP35573 1532 aa26.9■■□□□ 1.9
SMAD2-211ENST00000589877 KIAA1107Q9UPP5 1409 aa26.89■■□□□ 1.89
SMAD2-211ENST00000589877 SYCP2Q9BX26 1530 aa26.88■■□□□ 1.89
SMAD2-211ENST00000589877 SPAG9O60271 1321 aaKnown RBP26.88■■□□□ 1.89
SMAD2-211ENST00000589877 ESF1Q9H501 851 aaKnown RBP26.85■■□□□ 1.89
SMAD2-211ENST00000589877 PLEKHH2Q8IVE3 1493 aa26.85■■□□□ 1.89
SMAD2-211ENST00000589877 FBXO41Q8TF61 875 aa26.82■■□□□ 1.88
SMAD2-211ENST00000589877 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
SMAD2-211ENST00000589877 PREX1Q8TCU6 1659 aa26.81■■□□□ 1.88
SMAD2-211ENST00000589877 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
SMAD2-211ENST00000589877 ZNF644Q9H582 1327 aaPredicted RBP26.8■■□□□ 1.88
SMAD2-211ENST00000589877 SETD1BQ9UPS6 1966 aaKnown RBP26.8■■□□□ 1.88
SMAD2-211ENST00000589877 TIAM1Q13009 1591 aa26.77■■□□□ 1.88
SMAD2-211ENST00000589877 C3P01024 1663 aa26.76■■□□□ 1.87
SMAD2-211ENST00000589877 ATP7AQ04656 1500 aa26.76■■□□□ 1.87
SMAD2-211ENST00000589877 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
SMAD2-211ENST00000589877 CNTLNQ9NXG0 1405 aa26.74■■□□□ 1.87
SMAD2-211ENST00000589877 MBD5Q9P267 1494 aa26.73■■□□□ 1.87
SMAD2-211ENST00000589877 INO80Q9ULG1 1556 aaPredicted RBP26.72■■□□□ 1.87
SMAD2-211ENST00000589877 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
SMAD2-211ENST00000589877 A2MP01023 1474 aa26.71■■□□□ 1.87
SMAD2-211ENST00000589877 NCOA2Q15596 1464 aa26.68■■□□□ 1.86
SMAD2-211ENST00000589877 ZMYM3Q14202 1370 aa26.68■■□□□ 1.86
SMAD2-211ENST00000589877 PLXNC1O60486 1568 aa26.67■■□□□ 1.86
SMAD2-211ENST00000589877 DMRT2Q9Y5R5 561 aa26.67■■□□□ 1.86
SMAD2-211ENST00000589877 GGT6Q6P531 493 aa26.65■■□□□ 1.86
SMAD2-211ENST00000589877 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
SMAD2-211ENST00000589877 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
SMAD2-211ENST00000589877 STRCQ7RTU9 1775 aa26.64■■□□□ 1.86
SMAD2-211ENST00000589877 RSPH4AQ5TD94 716 aa26.63■■□□□ 1.85
SMAD2-211ENST00000589877 MROH2AA6NES4 1674 aa26.63■■□□□ 1.85
SMAD2-211ENST00000589877 CERKQ8TCT0 537 aa26.62■■□□□ 1.85
SMAD2-211ENST00000589877 PPP6R1Q9UPN7 881 aa26.62■■□□□ 1.85
SMAD2-211ENST00000589877 ADGBQ8N7X0 1667 aa26.62■■□□□ 1.85
SMAD2-211ENST00000589877 NPATQ14207 1427 aa26.6■■□□□ 1.85
SMAD2-211ENST00000589877 DHX29Q7Z478 1369 aaKnown RBP26.58■■□□□ 1.85
SMAD2-211ENST00000589877 CLTCQ00610 1675 aaKnown RBP26.58■■□□□ 1.85
SMAD2-211ENST00000589877 CAMSAP2Q08AD1 1489 aa26.58■■□□□ 1.85
SMAD2-211ENST00000589877 LRRC9Q6ZRR7 1453 aa26.58■■□□□ 1.85
SMAD2-211ENST00000589877 CCDC141Q6ZP82 1450 aa26.56■■□□□ 1.84
SMAD2-211ENST00000589877 KANK4Q5T7N3 995 aaPredicted RBP26.54■■□□□ 1.84
SMAD2-211ENST00000589877 PTPRTO14522 1441 aa26.52■■□□□ 1.84
SMAD2-211ENST00000589877 MAP3K1Q13233 1512 aa26.51■■□□□ 1.83
SMAD2-211ENST00000589877 PTPRKQ15262 1439 aa26.51■■□□□ 1.83
SMAD2-211ENST00000589877 KIF3BO15066 747 aa26.51■■□□□ 1.83
SMAD2-211ENST00000589877 TSPY4P0CV99 314 aa26.51■■□□□ 1.83
SMAD2-211ENST00000589877 TSPY10P0CW01 314 aa26.51■■□□□ 1.83
SMAD2-211ENST00000589877 ARHGEF5Q12774 1597 aa26.49■■□□□ 1.83
SMAD2-211ENST00000589877 NCOA1Q15788 1441 aa26.48■■□□□ 1.83
SMAD2-211ENST00000589877 CAMSAP1Q5T5Y3 1602 aa26.45■■□□□ 1.82
SMAD2-211ENST00000589877 NCKAP5LQ9HCH0 1330 aa26.41■■□□□ 1.82
SMAD2-211ENST00000589877 WASHC2CQ9Y4E1 1318 aa26.4■■□□□ 1.82
SMAD2-211ENST00000589877 MIA2Q96PC5 1412 aa26.4■■□□□ 1.82
SMAD2-211ENST00000589877 MYO3AQ8NEV4 1616 aa26.4■■□□□ 1.82
SMAD2-211ENST00000589877 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms