RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
H3F3B-208ENST00000589599 CCNB3Q8WWL7 1395 aa26.71■■□□□ 1.87
H3F3B-208ENST00000589599 POGZQ7Z3K3 1410 aa26.69■■□□□ 1.86
H3F3B-208ENST00000589599 ZNF777Q9ULD5 760 aaPredicted RBP26.68■■□□□ 1.86
H3F3B-208ENST00000589599 RICTORQ6R327 1708 aa26.68■■□□□ 1.86
H3F3B-208ENST00000589599 EHBP1L1Q8N3D4 1523 aa26.67■■□□□ 1.86
H3F3B-208ENST00000589599 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
H3F3B-208ENST00000589599 CFDP1Q9UEE9 299 aaPredicted RBP26.67■■□□□ 1.86
H3F3B-208ENST00000589599 PREX2Q70Z35 1606 aa26.67■■□□□ 1.86
H3F3B-208ENST00000589599 MAGI2Q86UL8 1455 aa26.66■■□□□ 1.86
H3F3B-208ENST00000589599 CDC42BPBQ9Y5S2 1711 aa26.65■■□□□ 1.86
H3F3B-208ENST00000589599 AFAP1Q8N556 730 aa26.64■■□□□ 1.86
H3F3B-208ENST00000589599 ZMYM4Q5VZL5 1548 aa26.64■■□□□ 1.85
H3F3B-208ENST00000589599 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.85
H3F3B-208ENST00000589599 APLP2Q06481 763 aa26.63■■□□□ 1.85
H3F3B-208ENST00000589599 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
H3F3B-208ENST00000589599 MYT1LQ9UL68 1186 aa26.62■■□□□ 1.85
H3F3B-208ENST00000589599 TIAM1Q13009 1591 aa26.62■■□□□ 1.85
H3F3B-208ENST00000589599 CDC42BPAQ5VT25 1732 aa26.61■■□□□ 1.85
H3F3B-208ENST00000589599 ZFYVE16Q7Z3T8 1539 aa26.6■■□□□ 1.85
H3F3B-208ENST00000589599 ARHGEF40Q8TER5 1519 aa26.58■■□□□ 1.85
H3F3B-208ENST00000589599 MAP3K1Q13233 1512 aa26.57■■□□□ 1.84
H3F3B-208ENST00000589599 YEATS2Q9ULM3 1422 aa26.56■■□□□ 1.84
H3F3B-208ENST00000589599 ABCC1P33527 1531 aa26.56■■□□□ 1.84
H3F3B-208ENST00000589599 LRRC9Q6ZRR7 1453 aa26.55■■□□□ 1.84
H3F3B-208ENST00000589599 PLEKHH2Q8IVE3 1493 aa26.55■■□□□ 1.84
H3F3B-208ENST00000589599 HNRNPMP52272 730 aaKnown RBP eCLIP26.54■■□□□ 1.84
H3F3B-208ENST00000589599 TRAPPC8Q9Y2L5 1435 aa26.54■■□□□ 1.84
H3F3B-208ENST00000589599 NCOA2Q15596 1464 aa26.54■■□□□ 1.84
H3F3B-208ENST00000589599 ARHGEF12Q9NZN5 1544 aa26.54■■□□□ 1.84
H3F3B-208ENST00000589599 KANK4Q5T7N3 995 aaPredicted RBP26.52■■□□□ 1.84
H3F3B-208ENST00000589599 KIAA1107Q9UPP5 1409 aa26.52■■□□□ 1.84
H3F3B-208ENST00000589599 SUPT6HQ7KZ85 1726 aaKnown RBP26.51■■□□□ 1.83
H3F3B-208ENST00000589599 ATP10AO60312 1499 aa26.51■■□□□ 1.83
H3F3B-208ENST00000589599 KDM5CP41229 1560 aa26.5■■□□□ 1.83
H3F3B-208ENST00000589599 SAMD9LQ8IVG5 1584 aa26.5■■□□□ 1.83
H3F3B-208ENST00000589599 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
H3F3B-208ENST00000589599 ZNF644Q9H582 1327 aaPredicted RBP26.47■■□□□ 1.83
H3F3B-208ENST00000589599 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
H3F3B-208ENST00000589599 SPAG9O60271 1321 aaKnown RBP26.46■■□□□ 1.83
H3F3B-208ENST00000589599 C9orf84Q5VXU9 1444 aa26.46■■□□□ 1.83
H3F3B-208ENST00000589599 SYCP2Q9BX26 1530 aa26.45■■□□□ 1.83
H3F3B-208ENST00000589599 HECW2Q9P2P5 1572 aa26.45■■□□□ 1.82
H3F3B-208ENST00000589599 MLECQ14165 292 aa26.41■■□□□ 1.82
H3F3B-208ENST00000589599 RSPH4AQ5TD94 716 aa26.39■■□□□ 1.82
H3F3B-208ENST00000589599 BCORL1Q5H9F3 1711 aa26.39■■□□□ 1.81
H3F3B-208ENST00000589599 ADAMTSL3P82987 1691 aa26.38■■□□□ 1.81
H3F3B-208ENST00000589599 DIP2CQ9Y2E4 1556 aa26.36■■□□□ 1.81
H3F3B-208ENST00000589599 MBD5Q9P267 1494 aa26.35■■□□□ 1.81
H3F3B-208ENST00000589599 CAMSAP2Q08AD1 1489 aa26.33■■□□□ 1.81
H3F3B-208ENST00000589599 MYOM3Q5VTT5 1437 aa26.32■■□□□ 1.8
H3F3B-208ENST00000589599 PTPRMP28827 1452 aa26.32■■□□□ 1.8
H3F3B-208ENST00000589599 ABCA6Q8N139 1617 aa26.32■■□□□ 1.8
H3F3B-208ENST00000589599 KIDINS220Q9ULH0 1771 aa26.31■■□□□ 1.8
H3F3B-208ENST00000589599 REREQ9P2R6 1566 aa26.31■■□□□ 1.8
H3F3B-208ENST00000589599 MIA2Q96PC5 1412 aa26.31■■□□□ 1.8
H3F3B-208ENST00000589599 ATP7AQ04656 1500 aa26.29■■□□□ 1.8
H3F3B-208ENST00000589599 MADDQ8WXG6 1647 aa26.29■■□□□ 1.8
H3F3B-208ENST00000589599 SIGLEC1Q9BZZ2 1709 aa26.29■■□□□ 1.8
H3F3B-208ENST00000589599 TSPY4P0CV99 314 aa26.29■■□□□ 1.8
H3F3B-208ENST00000589599 TSPY10P0CW01 314 aa26.29■■□□□ 1.8
H3F3B-208ENST00000589599 CCDC141Q6ZP82 1450 aa26.28■■□□□ 1.8
H3F3B-208ENST00000589599 RTEL1-TNFRSF6BF6WH68 1400 aa26.27■■□□□ 1.8
H3F3B-208ENST00000589599 AGLP35573 1532 aa26.26■■□□□ 1.79
H3F3B-208ENST00000589599 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
H3F3B-208ENST00000589599 INO80Q9ULG1 1556 aaPredicted RBP26.24■■□□□ 1.79
H3F3B-208ENST00000589599 PLPPR3Q6T4P5 718 aa26.23■■□□□ 1.79
H3F3B-208ENST00000589599 A2MP01023 1474 aa26.23■■□□□ 1.79
H3F3B-208ENST00000589599 RIMS1Q86UR5 1692 aaKnown RBP26.21■■□□□ 1.79
H3F3B-208ENST00000589599 ARHGEF5Q12774 1597 aa26.2■■□□□ 1.79
H3F3B-208ENST00000589599 DHX29Q7Z478 1369 aaKnown RBP26.16■■□□□ 1.78
H3F3B-208ENST00000589599 FER1L4A9Z1Z3 1794 aa26.15■■□□□ 1.78
H3F3B-208ENST00000589599 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
H3F3B-208ENST00000589599 ADGBQ8N7X0 1667 aa26.12■■□□□ 1.77
H3F3B-208ENST00000589599 GGT6Q6P531 493 aa26.12■■□□□ 1.77
H3F3B-208ENST00000589599 CEBPAP49715 358 aaPredicted RBP26.11■■□□□ 1.77
H3F3B-208ENST00000589599 PLXNC1O60486 1568 aa26.11■■□□□ 1.77
H3F3B-208ENST00000589599 PTPN23Q9H3S7 1636 aa26.1■■□□□ 1.77
H3F3B-208ENST00000589599 PPP6R1Q9UPN7 881 aa26.1■■□□□ 1.77
H3F3B-208ENST00000589599 CNTLNQ9NXG0 1405 aa26.1■■□□□ 1.77
H3F3B-208ENST00000589599 KIF3BO15066 747 aa26.08■■□□□ 1.77
H3F3B-208ENST00000589599 TCOF1Q13428 1488 aaKnown RBP26.07■■□□□ 1.76
H3F3B-208ENST00000589599 FAM50AQ14320 339 aaKnown RBP26.06■■□□□ 1.76
H3F3B-208ENST00000589599 ABCC5O15440 1437 aa26.05■■□□□ 1.76
H3F3B-208ENST00000589599 MAST1Q9Y2H9 1570 aa26.05■■□□□ 1.76
H3F3B-208ENST00000589599 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
H3F3B-208ENST00000589599 DAPK1P53355 1430 aa26.01■■□□□ 1.75
H3F3B-208ENST00000589599 SHANK2Q9UPX8 1470 aa26■■□□□ 1.75
H3F3B-208ENST00000589599 ZMYM3Q14202 1370 aa26■■□□□ 1.75
H3F3B-208ENST00000589599 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
H3F3B-208ENST00000589599 CHIC2Q9UKJ5 165 aa25.97■■□□□ 1.75
H3F3B-208ENST00000589599 LMTK3Q96Q04 1460 aa25.96■■□□□ 1.75
H3F3B-208ENST00000589599 DNMT1P26358 1616 aaKnown RBP25.96■■□□□ 1.75
H3F3B-208ENST00000589599 KIF15Q9NS87 1388 aa25.95■■□□□ 1.75
H3F3B-208ENST00000589599 ANKRD30AQ9BXX3 1397 aa25.95■■□□□ 1.74
H3F3B-208ENST00000589599 WASHC2CQ9Y4E1 1318 aa25.94■■□□□ 1.74
H3F3B-208ENST00000589599 DUOX2Q9NRD8 1548 aa25.93■■□□□ 1.74
H3F3B-208ENST00000589599 HSPA2P54652 639 aa25.92■■□□□ 1.74
H3F3B-208ENST00000589599 C3P01024 1663 aa25.92■■□□□ 1.74
H3F3B-208ENST00000589599 MROH2AA6NES4 1674 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms