RNA–Protein interactions for RNA: ENST00000589562.1

SLFN11-209, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-209ENST00000589562 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
SLFN11-209ENST00000589562 PDE4AP27815 886 aa13.47□□□□□ -0.25
SLFN11-209ENST00000589562 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
SLFN11-209ENST00000589562 POTEJP0CG39 1038 aa13.46□□□□□ -0.25
SLFN11-209ENST00000589562 MFSD10Q14728 455 aa13.45□□□□□ -0.26
SLFN11-209ENST00000589562 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
SLFN11-209ENST00000589562 C2orf72A6NCS6 295 aa13.43□□□□□ -0.26
SLFN11-209ENST00000589562 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
SLFN11-209ENST00000589562 DDX27Q96GQ7 796 aaKnown RBP13.42□□□□□ -0.26
SLFN11-209ENST00000589562 KIF3CO14782 793 aa13.4□□□□□ -0.26
SLFN11-209ENST00000589562 DSG2Q14126 1118 aa13.4□□□□□ -0.26
SLFN11-209ENST00000589562 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
SLFN11-209ENST00000589562 PPP1R15BQ5SWA1 713 aa13.39□□□□□ -0.27
SLFN11-209ENST00000589562 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
SLFN11-209ENST00000589562 E2F4Q16254 413 aa13.36□□□□□ -0.27
SLFN11-209ENST00000589562 FOXK1P85037 733 aa13.33□□□□□ -0.28
SLFN11-209ENST00000589562 PLPP6Q8IY26 295 aa13.32□□□□□ -0.28
SLFN11-209ENST00000589562 BCANQ96GW7 911 aa13.31□□□□□ -0.28
SLFN11-209ENST00000589562 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.31□□□□□ -0.28
SLFN11-209ENST00000589562 CAMK2BQ13554 666 aa13.3□□□□□ -0.28
SLFN11-209ENST00000589562 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
SLFN11-209ENST00000589562 EMILIN3Q9NT22 766 aa13.28□□□□□ -0.28
SLFN11-209ENST00000589562 NBR1Q14596 966 aa13.24□□□□□ -0.29
SLFN11-209ENST00000589562 ARHGEF1Q92888 912 aaKnown RBP13.22□□□□□ -0.29
SLFN11-209ENST00000589562 DPYSL4O14531 572 aa13.2□□□□□ -0.3
SLFN11-209ENST00000589562 SLAIN1Q8ND83 568 aa13.2□□□□□ -0.3
SLFN11-209ENST00000589562 UPF1Q92900 1129 aaKnown RBP eCLIP13.2□□□□□ -0.3
SLFN11-209ENST00000589562 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
SLFN11-209ENST00000589562 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
SLFN11-209ENST00000589562 SEMA3EO15041 775 aa13.15□□□□□ -0.3
SLFN11-209ENST00000589562 LHX8Q68G74 356 aa13.15□□□□□ -0.3
SLFN11-209ENST00000589562 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
SLFN11-209ENST00000589562 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
SLFN11-209ENST00000589562 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
SLFN11-209ENST00000589562 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
SLFN11-209ENST00000589562 MAP3K9P80192 1104 aa13.08□□□□□ -0.32
SLFN11-209ENST00000589562 PDIA6Q15084 440 aa13.07□□□□□ -0.32
SLFN11-209ENST00000589562 PTCD2Q8WV60 388 aaKnown RBP13.07□□□□□ -0.32
SLFN11-209ENST00000589562 SLC34A2O95436 690 aa13.06□□□□□ -0.32
SLFN11-209ENST00000589562 MLLT3P42568 568 aaPredicted RBP13.06□□□□□ -0.32
SLFN11-209ENST00000589562 TESPA1A2RU30 521 aaPredicted RBP13.05□□□□□ -0.32
SLFN11-209ENST00000589562 PCDHGA4Q9Y5G9 962 aa13.04□□□□□ -0.32
SLFN11-209ENST00000589562 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
SLFN11-209ENST00000589562 EVI5O60447 810 aa13.01□□□□□ -0.33
SLFN11-209ENST00000589562 SPDYE16A6NNV3 312 aaPredicted RBP13□□□□□ -0.33
SLFN11-209ENST00000589562 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
SLFN11-209ENST00000589562 DOK7Q18PE1 504 aa12.98□□□□□ -0.33
SLFN11-209ENST00000589562 ARSIQ5FYB1 569 aa12.98□□□□□ -0.33
SLFN11-209ENST00000589562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLFN11-209ENST00000589562 TBC1D12O60347 775 aa12.96□□□□□ -0.33
SLFN11-209ENST00000589562 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
SLFN11-209ENST00000589562 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 NUDT7P0C024 238 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 TPRNQ4KMQ1 711 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 DDX12PQ92771 950 aa12.94□□□□□ -0.34
SLFN11-209ENST00000589562 ZNF710Q8N1W2 664 aa12.92□□□□□ -0.34
SLFN11-209ENST00000589562 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
SLFN11-209ENST00000589562 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
SLFN11-209ENST00000589562 RIMBP2O15034 1052 aa12.89□□□□□ -0.35
SLFN11-209ENST00000589562 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
SLFN11-209ENST00000589562 SNPHO15079 494 aa12.88□□□□□ -0.35
SLFN11-209ENST00000589562 PTGER2P43116 358 aa12.88□□□□□ -0.35
SLFN11-209ENST00000589562 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
SLFN11-209ENST00000589562 ZNF316A6NFI3 1004 aaPredicted RBP12.86□□□□□ -0.35
SLFN11-209ENST00000589562 OSBPP22059 807 aa12.86□□□□□ -0.35
SLFN11-209ENST00000589562 SMYD5Q6GMV2 418 aa12.86□□□□□ -0.35
SLFN11-209ENST00000589562 TULP1O00294 542 aaPredicted RBP12.85□□□□□ -0.35
SLFN11-209ENST00000589562 HOXB1P14653 301 aaPredicted RBP12.83□□□□□ -0.36
SLFN11-209ENST00000589562 LHX6Q9UPM6 363 aa12.82□□□□□ -0.36
SLFN11-209ENST00000589562 PCDHGA10Q9Y5H3 936 aa12.82□□□□□ -0.36
SLFN11-209ENST00000589562 ST18O60284 1047 aa12.79□□□□□ -0.36
SLFN11-209ENST00000589562 PHF14O94880 888 aa12.79□□□□□ -0.36
SLFN11-209ENST00000589562 FOSBP53539 338 aa12.78□□□□□ -0.36
SLFN11-209ENST00000589562 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
SLFN11-209ENST00000589562 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
SLFN11-209ENST00000589562 RBM33Q96EV2 1170 aaKnown RBP12.78□□□□□ -0.36
SLFN11-209ENST00000589562 JPH4Q96JJ6 628 aa12.77□□□□□ -0.37
SLFN11-209ENST00000589562 GPIHBP1Q8IV16 184 aa12.76□□□□□ -0.37
SLFN11-209ENST00000589562 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
SLFN11-209ENST00000589562 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
SLFN11-209ENST00000589562 EN1Q05925 392 aaPredicted RBP12.74□□□□□ -0.37
SLFN11-209ENST00000589562 TYW1BQ6NUM6 668 aa12.74□□□□□ -0.37
SLFN11-209ENST00000589562 MARVELD3Q96A59 401 aa12.74□□□□□ -0.37
SLFN11-209ENST00000589562 NUTM2FA1L443 756 aa12.73□□□□□ -0.37
SLFN11-209ENST00000589562 GPR37O15354 613 aa12.73□□□□□ -0.37
SLFN11-209ENST00000589562 TSR1Q2NL82 804 aaKnown RBP12.73□□□□□ -0.37
SLFN11-209ENST00000589562 LCE2DQ5TA82 110 aaPredicted RBP12.73□□□□□ -0.37
SLFN11-209ENST00000589562 EPAS1Q99814 870 aa12.73□□□□□ -0.37
SLFN11-209ENST00000589562 MAP3K7O43318 606 aa12.71□□□□□ -0.37
SLFN11-209ENST00000589562 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
SLFN11-209ENST00000589562 ZDHHC16Q969W1 377 aa12.7□□□□□ -0.38
SLFN11-209ENST00000589562 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
SLFN11-209ENST00000589562 ZMYND10O75800 440 aa12.66□□□□□ -0.38
SLFN11-209ENST00000589562 EMP3P54852 163 aa12.66□□□□□ -0.38
SLFN11-209ENST00000589562 PPP4R3BQ5MIZ7 849 aa12.66□□□□□ -0.38
SLFN11-209ENST00000589562 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.38
SLFN11-209ENST00000589562 ERBB3P21860 1342 aa12.64□□□□□ -0.39
SLFN11-209ENST00000589562 PTGDRQ13258 359 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms