RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 YEATS2Q9ULM3 1422 aa39.1■■■■□ 3.85
LSM7-205ENST00000589532 CASKIN1Q8WXD9 1431 aa39.07■■■■□ 3.85
LSM7-205ENST00000589532 SCAPERQ9BY12 1400 aa39.06■■■■□ 3.84
LSM7-205ENST00000589532 ATP1B4Q9UN42 357 aaPredicted RBP39.06■■■■□ 3.84
LSM7-205ENST00000589532 CDK11AQ9UQ88 783 aaPredicted RBP39.04■■■■□ 3.84
LSM7-205ENST00000589532 CCDC18Q5T9S5 1454 aa39.03■■■■□ 3.84
LSM7-205ENST00000589532 CLIP1P30622 1438 aa39.01■■■■□ 3.84
LSM7-205ENST00000589532 RIMS1Q86UR5 1692 aaKnown RBP39■■■■□ 3.83
LSM7-205ENST00000589532 ARID4BQ4LE39 1312 aaPredicted RBP38.97■■■■□ 3.83
LSM7-205ENST00000589532 KDM5CP41229 1560 aa38.96■■■■□ 3.83
LSM7-205ENST00000589532 CDC42BPBQ9Y5S2 1711 aa38.96■■■■□ 3.83
LSM7-205ENST00000589532 FYCO1Q9BQS8 1478 aa38.96■■■■□ 3.83
LSM7-205ENST00000589532 ARHGAP5Q13017 1502 aa38.95■■■■□ 3.83
LSM7-205ENST00000589532 PREX2Q70Z35 1606 aa38.95■■■■□ 3.83
LSM7-205ENST00000589532 EFCAB2Q5VUJ9 269 aa38.94■■■■□ 3.82
LSM7-205ENST00000589532 ZNF518AQ6AHZ1 1483 aa38.9■■■■□ 3.82
LSM7-205ENST00000589532 LMTK3Q96Q04 1460 aa38.86■■■■□ 3.81
LSM7-205ENST00000589532 C9orf84Q5VXU9 1444 aa38.84■■■■□ 3.81
LSM7-205ENST00000589532 ATP10AO60312 1499 aa38.84■■■■□ 3.81
LSM7-205ENST00000589532 ABCC1P33527 1531 aa38.84■■■■□ 3.81
LSM7-205ENST00000589532 FER1L4A9Z1Z3 1794 aa38.83■■■■□ 3.81
LSM7-205ENST00000589532 CDC42BPAQ5VT25 1732 aa38.82■■■■□ 3.8
LSM7-205ENST00000589532 ARHGEF12Q9NZN5 1544 aa38.81■■■■□ 3.8
LSM7-205ENST00000589532 DIP2CQ9Y2E4 1556 aa38.78■■■■□ 3.8
LSM7-205ENST00000589532 ITSN2Q9NZM3 1697 aa38.78■■■■□ 3.8
LSM7-205ENST00000589532 REREQ9P2R6 1566 aa38.76■■■■□ 3.8
LSM7-205ENST00000589532 ABCA6Q8N139 1617 aa38.74■■■■□ 3.79
LSM7-205ENST00000589532 ILDR1Q86SU0 546 aaPredicted RBP38.73■■■■□ 3.79
LSM7-205ENST00000589532 MLH3Q9UHC1 1453 aa38.72■■■■□ 3.79
LSM7-205ENST00000589532 AFAP1Q8N556 730 aa38.7■■■■□ 3.79
LSM7-205ENST00000589532 TRAPPC8Q9Y2L5 1435 aa38.69■■■■□ 3.78
LSM7-205ENST00000589532 SAMD9LQ8IVG5 1584 aa38.64■■■■□ 3.78
LSM7-205ENST00000589532 MLECQ14165 292 aa38.62■■■■□ 3.77
LSM7-205ENST00000589532 GPATCH8Q9UKJ3 1502 aaKnown RBP38.62■■■■□ 3.77
LSM7-205ENST00000589532 KIDINS220Q9ULH0 1771 aa38.62■■■■□ 3.77
LSM7-205ENST00000589532 AGLP35573 1532 aa38.58■■■■□ 3.77
LSM7-205ENST00000589532 SYCP2Q9BX26 1530 aa38.54■■■■□ 3.76
LSM7-205ENST00000589532 PREX1Q8TCU6 1659 aa38.5■■■■□ 3.75
LSM7-205ENST00000589532 CEP162Q5TB80 1403 aa38.49■■■■□ 3.75
LSM7-205ENST00000589532 EHBP1L1Q8N3D4 1523 aa38.45■■■■□ 3.75
LSM7-205ENST00000589532 PLPPR3Q6T4P5 718 aa38.45■■■■□ 3.75
LSM7-205ENST00000589532 TIAM1Q13009 1591 aa38.44■■■■□ 3.74
LSM7-205ENST00000589532 INO80Q9ULG1 1556 aaPredicted RBP38.44■■■■□ 3.74
LSM7-205ENST00000589532 HSPA2P54652 639 aa38.43■■■■□ 3.74
LSM7-205ENST00000589532 KIAA1107Q9UPP5 1409 aa38.43■■■■□ 3.74
LSM7-205ENST00000589532 MTUS2Q5JR59 1369 aa38.41■■■■□ 3.74
LSM7-205ENST00000589532 PLEKHH2Q8IVE3 1493 aa38.4■■■■□ 3.74
LSM7-205ENST00000589532 C3P01024 1663 aa38.39■■■■□ 3.74
LSM7-205ENST00000589532 MYT1LQ9UL68 1186 aa38.38■■■■□ 3.73
LSM7-205ENST00000589532 CCNB3Q8WWL7 1395 aa38.37■■■■□ 3.73
LSM7-205ENST00000589532 ATP7AQ04656 1500 aa38.37■■■■□ 3.73
LSM7-205ENST00000589532 PLXNC1O60486 1568 aa38.36■■■■□ 3.73
LSM7-205ENST00000589532 CEBPAP49715 358 aaPredicted RBP38.35■■■■□ 3.73
LSM7-205ENST00000589532 ZNF777Q9ULD5 760 aaPredicted RBP38.34■■■■□ 3.73
LSM7-205ENST00000589532 CFDP1Q9UEE9 299 aaPredicted RBP38.3■■■■□ 3.72
LSM7-205ENST00000589532 HNRNPMP52272 730 aaKnown RBP eCLIP38.28■■■■□ 3.72
LSM7-205ENST00000589532 SPAG9O60271 1321 aaKnown RBP38.27■■■■□ 3.72
LSM7-205ENST00000589532 MROH2AA6NES4 1674 aa38.26■■■■□ 3.71
LSM7-205ENST00000589532 SETD1BQ9UPS6 1966 aaKnown RBP38.26■■■■□ 3.71
LSM7-205ENST00000589532 SUPT6HQ7KZ85 1726 aaKnown RBP38.24■■■■□ 3.71
LSM7-205ENST00000589532 MBD5Q9P267 1494 aa38.24■■■■□ 3.71
LSM7-205ENST00000589532 UHRF1BP1Q6BDS2 1440 aa38.24■■■■□ 3.71
LSM7-205ENST00000589532 CNTLNQ9NXG0 1405 aa38.24■■■■□ 3.71
LSM7-205ENST00000589532 FBXO41Q8TF61 875 aa38.22■■■■□ 3.71
LSM7-205ENST00000589532 STRCQ7RTU9 1775 aa38.21■■■■□ 3.71
LSM7-205ENST00000589532 A2MP01023 1474 aa38.19■■■■□ 3.7
LSM7-205ENST00000589532 ADGBQ8N7X0 1667 aa38.18■■■■□ 3.7
LSM7-205ENST00000589532 NCOA2Q15596 1464 aa38.16■■■■□ 3.7
LSM7-205ENST00000589532 ZNF644Q9H582 1327 aaPredicted RBP38.16■■■■□ 3.7
LSM7-205ENST00000589532 VPS8Q8N3P4 1428 aa38.12■■■■□ 3.69
LSM7-205ENST00000589532 CLTCQ00610 1675 aaKnown RBP38.09■■■■□ 3.69
LSM7-205ENST00000589532 RTEL1-TNFRSF6BF6WH68 1400 aa38.08■■■■□ 3.69
LSM7-205ENST00000589532 NPATQ14207 1427 aa38.08■■■■□ 3.69
LSM7-205ENST00000589532 CAMSAP2Q08AD1 1489 aa38.08■■■■□ 3.69
LSM7-205ENST00000589532 ESF1Q9H501 851 aaKnown RBP38.07■■■■□ 3.68
LSM7-205ENST00000589532 CCDC141Q6ZP82 1450 aa38.04■■■■□ 3.68
LSM7-205ENST00000589532 ZMYM3Q14202 1370 aa38.01■■■■□ 3.68
LSM7-205ENST00000589532 LRRC9Q6ZRR7 1453 aa38.01■■■■□ 3.67
LSM7-205ENST00000589532 LOC105371045A0A1W2PR82 267 aa37.98■■■■□ 3.67
LSM7-205ENST00000589532 ZNF142P52746 1687 aaPredicted RBP37.98■■■■□ 3.67
LSM7-205ENST00000589532 ARHGEF5Q12774 1597 aa37.97■■■■□ 3.67
LSM7-205ENST00000589532 MYO3AQ8NEV4 1616 aa37.97■■■■□ 3.67
LSM7-205ENST00000589532 MAP3K1Q13233 1512 aa37.97■■■■□ 3.67
LSM7-205ENST00000589532 NCOA1Q15788 1441 aa37.95■■■■□ 3.67
LSM7-205ENST00000589532 PTPRTO14522 1441 aa37.94■■■■□ 3.66
LSM7-205ENST00000589532 PTPRKQ15262 1439 aa37.94■■■■□ 3.66
LSM7-205ENST00000589532 DHX29Q7Z478 1369 aaKnown RBP37.92■■■■□ 3.66
LSM7-205ENST00000589532 CERKQ8TCT0 537 aa37.91■■■■□ 3.66
LSM7-205ENST00000589532 DMRT2Q9Y5R5 561 aa37.88■■■■□ 3.65
LSM7-205ENST00000589532 CAMSAP1Q5T5Y3 1602 aa37.87■■■■□ 3.65
LSM7-205ENST00000589532 FAM135AQ9P2D6 1515 aa37.86■■■■□ 3.65
LSM7-205ENST00000589532 CEP170BQ9Y4F5 1589 aaPredicted RBP37.85■■■■□ 3.65
LSM7-205ENST00000589532 GGT6Q6P531 493 aa37.85■■■■□ 3.65
LSM7-205ENST00000589532 PPP6R1Q9UPN7 881 aa37.85■■■■□ 3.65
LSM7-205ENST00000589532 MAST1Q9Y2H9 1570 aa37.82■■■■□ 3.65
LSM7-205ENST00000589532 RSPH4AQ5TD94 716 aa37.81■■■■□ 3.64
LSM7-205ENST00000589532 KDM5DQ9BY66 1539 aa37.8■■■■□ 3.64
LSM7-205ENST00000589532 LTBP4Q8N2S1 1624 aa37.78■■■■□ 3.64
LSM7-205ENST00000589532 PLA2R1Q13018 1463 aa37.77■■■■□ 3.64
LSM7-205ENST00000589532 KANK4Q5T7N3 995 aaPredicted RBP37.77■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms