RNA–Protein interactions for RNA: ENST00000589381.5

ERCC1-210, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-210ENST00000589381 COL17A1Q9UMD9 1497 aaPredicted RBP28.91■■■□□ 2.22
ERCC1-210ENST00000589381 AKNAQ7Z591 1439 aa28.89■■■□□ 2.22
ERCC1-210ENST00000589381 EFCAB2Q5VUJ9 269 aa28.89■■■□□ 2.22
ERCC1-210ENST00000589381 CCNB3Q8WWL7 1395 aa28.87■■■□□ 2.21
ERCC1-210ENST00000589381 ITSN2Q9NZM3 1697 aa28.85■■■□□ 2.21
ERCC1-210ENST00000589381 GPATCH8Q9UKJ3 1502 aaKnown RBP28.84■■■□□ 2.21
ERCC1-210ENST00000589381 KANK4Q5T7N3 995 aaPredicted RBP28.83■■■□□ 2.21
ERCC1-210ENST00000589381 ADGRL1O94910 1474 aa28.83■■■□□ 2.21
ERCC1-210ENST00000589381 NCOA2Q15596 1464 aa28.82■■■□□ 2.2
ERCC1-210ENST00000589381 DENND4BO75064 1496 aaPredicted RBP28.79■■■□□ 2.2
ERCC1-210ENST00000589381 RICTORQ6R327 1708 aa28.78■■■□□ 2.2
ERCC1-210ENST00000589381 CFDP1Q9UEE9 299 aaPredicted RBP28.77■■■□□ 2.2
ERCC1-210ENST00000589381 RAPGEF3O95398 923 aa28.76■■■□□ 2.19
ERCC1-210ENST00000589381 SCAPERQ9BY12 1400 aa28.76■■■□□ 2.19
ERCC1-210ENST00000589381 ZNF777Q9ULD5 760 aaPredicted RBP28.74■■■□□ 2.19
ERCC1-210ENST00000589381 FRMPD1Q5SYB0 1578 aa28.74■■■□□ 2.19
ERCC1-210ENST00000589381 ABCC1P33527 1531 aa28.71■■■□□ 2.19
ERCC1-210ENST00000589381 SAMD9LQ8IVG5 1584 aa28.71■■■□□ 2.19
ERCC1-210ENST00000589381 POGZQ7Z3K3 1410 aa28.69■■■□□ 2.18
ERCC1-210ENST00000589381 PLEKHH2Q8IVE3 1493 aa28.66■■■□□ 2.18
ERCC1-210ENST00000589381 ZNF518AQ6AHZ1 1483 aa28.66■■■□□ 2.18
ERCC1-210ENST00000589381 ZMYM4Q5VZL5 1548 aa28.64■■■□□ 2.17
ERCC1-210ENST00000589381 SYCP2Q9BX26 1530 aa28.64■■■□□ 2.17
ERCC1-210ENST00000589381 MYOM3Q5VTT5 1437 aa28.61■■■□□ 2.17
ERCC1-210ENST00000589381 ARHGEF12Q9NZN5 1544 aa28.61■■■□□ 2.17
ERCC1-210ENST00000589381 KIAA1107Q9UPP5 1409 aa28.6■■■□□ 2.17
ERCC1-210ENST00000589381 KDM5CP41229 1560 aa28.58■■■□□ 2.17
ERCC1-210ENST00000589381 AFAP1Q8N556 730 aa28.58■■■□□ 2.17
ERCC1-210ENST00000589381 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
ERCC1-210ENST00000589381 HNRNPMP52272 730 aaKnown RBP eCLIP28.57■■■□□ 2.16
ERCC1-210ENST00000589381 ZNF644Q9H582 1327 aaPredicted RBP28.57■■■□□ 2.16
ERCC1-210ENST00000589381 TRAPPC8Q9Y2L5 1435 aa28.57■■■□□ 2.16
ERCC1-210ENST00000589381 CAMSAP2Q08AD1 1489 aa28.57■■■□□ 2.16
ERCC1-210ENST00000589381 ZFYVE16Q7Z3T8 1539 aa28.56■■■□□ 2.16
ERCC1-210ENST00000589381 ARHGEF40Q8TER5 1519 aa28.56■■■□□ 2.16
ERCC1-210ENST00000589381 HECW2Q9P2P5 1572 aa28.55■■■□□ 2.16
ERCC1-210ENST00000589381 MIA2Q96PC5 1412 aa28.55■■■□□ 2.16
ERCC1-210ENST00000589381 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
ERCC1-210ENST00000589381 YEATS2Q9ULM3 1422 aa28.49■■■□□ 2.15
ERCC1-210ENST00000589381 MLH3Q9UHC1 1453 aa28.48■■■□□ 2.15
ERCC1-210ENST00000589381 PTPN23Q9H3S7 1636 aa28.48■■■□□ 2.15
ERCC1-210ENST00000589381 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
ERCC1-210ENST00000589381 MBD5Q9P267 1494 aa28.47■■■□□ 2.15
ERCC1-210ENST00000589381 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
ERCC1-210ENST00000589381 FGD6Q6ZV73 1430 aa28.46■■■□□ 2.15
ERCC1-210ENST00000589381 SPAG9O60271 1321 aaKnown RBP28.45■■■□□ 2.15
ERCC1-210ENST00000589381 ARHGEF5Q12774 1597 aa28.45■■■□□ 2.14
ERCC1-210ENST00000589381 RSPH4AQ5TD94 716 aa28.44■■■□□ 2.14
ERCC1-210ENST00000589381 CCDC141Q6ZP82 1450 aa28.44■■■□□ 2.14
ERCC1-210ENST00000589381 ATP10AO60312 1499 aa28.42■■■□□ 2.14
ERCC1-210ENST00000589381 ABCA6Q8N139 1617 aa28.42■■■□□ 2.14
ERCC1-210ENST00000589381 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
ERCC1-210ENST00000589381 DIP2CQ9Y2E4 1556 aa28.41■■■□□ 2.14
ERCC1-210ENST00000589381 ATP7AQ04656 1500 aa28.41■■■□□ 2.14
ERCC1-210ENST00000589381 ARID4BQ4LE39 1312 aaPredicted RBP28.39■■■□□ 2.13
ERCC1-210ENST00000589381 C9orf84Q5VXU9 1444 aa28.38■■■□□ 2.13
ERCC1-210ENST00000589381 TCOF1Q13428 1488 aaKnown RBP28.37■■■□□ 2.13
ERCC1-210ENST00000589381 TSPY4P0CV99 314 aa28.35■■■□□ 2.13
ERCC1-210ENST00000589381 TSPY10P0CW01 314 aa28.35■■■□□ 2.13
ERCC1-210ENST00000589381 SIGLEC1Q9BZZ2 1709 aa28.33■■■□□ 2.13
ERCC1-210ENST00000589381 RTEL1-TNFRSF6BF6WH68 1400 aa28.33■■■□□ 2.13
ERCC1-210ENST00000589381 CROCC2H7BZ55 1655 aa28.32■■■□□ 2.12
ERCC1-210ENST00000589381 ADGBQ8N7X0 1667 aa28.32■■■□□ 2.12
ERCC1-210ENST00000589381 REREQ9P2R6 1566 aa28.32■■■□□ 2.12
ERCC1-210ENST00000589381 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
ERCC1-210ENST00000589381 DNMT1P26358 1616 aaKnown RBP28.31■■■□□ 2.12
ERCC1-210ENST00000589381 BCORL1Q5H9F3 1711 aa28.3■■■□□ 2.12
ERCC1-210ENST00000589381 MAST1Q9Y2H9 1570 aa28.28■■■□□ 2.12
ERCC1-210ENST00000589381 KDM4FA0A1W2PPD8 638 aa28.26■■■□□ 2.11
ERCC1-210ENST00000589381 DAPK1P53355 1430 aa28.25■■■□□ 2.11
ERCC1-210ENST00000589381 A2MP01023 1474 aa28.24■■■□□ 2.11
ERCC1-210ENST00000589381 ABCC5O15440 1437 aa28.24■■■□□ 2.11
ERCC1-210ENST00000589381 SHANK2Q9UPX8 1470 aa28.23■■■□□ 2.11
ERCC1-210ENST00000589381 ADAMTSL3P82987 1691 aa28.23■■■□□ 2.11
ERCC1-210ENST00000589381 AGLP35573 1532 aa28.22■■■□□ 2.11
ERCC1-210ENST00000589381 PLXNC1O60486 1568 aa28.2■■■□□ 2.11
ERCC1-210ENST00000589381 MLECQ14165 292 aa28.2■■■□□ 2.1
ERCC1-210ENST00000589381 FER1L4A9Z1Z3 1794 aa28.18■■■□□ 2.1
ERCC1-210ENST00000589381 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
ERCC1-210ENST00000589381 MADDQ8WXG6 1647 aa28.17■■■□□ 2.1
ERCC1-210ENST00000589381 DHX29Q7Z478 1369 aaKnown RBP28.14■■■□□ 2.1
ERCC1-210ENST00000589381 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.14■■■□□ 2.17e-7■■■■■ 52.8
ERCC1-210ENST00000589381 RRBP1Q9P2E9 1410 aaKnown RBP28.14■■■□□ 2.1
ERCC1-210ENST00000589381 RIMS1Q86UR5 1692 aaKnown RBP28.13■■■□□ 2.09
ERCC1-210ENST00000589381 CHIC2Q9UKJ5 165 aa28.12■■■□□ 2.09
ERCC1-210ENST00000589381 ANKRD30AQ9BXX3 1397 aa28.1■■■□□ 2.09
ERCC1-210ENST00000589381 DUOX2Q9NRD8 1548 aa28.08■■■□□ 2.09
ERCC1-210ENST00000589381 KIF15Q9NS87 1388 aa28.08■■■□□ 2.09
ERCC1-210ENST00000589381 RRP7BPQ9NSQ0 103 aa28.07■■■□□ 2.08
ERCC1-210ENST00000589381 ITGAEP38570 1179 aa28.06■■■□□ 2.08
ERCC1-210ENST00000589381 ADGRL2O95490 1459 aa28.05■■■□□ 2.08
ERCC1-210ENST00000589381 ESF1Q9H501 851 aaKnown RBP28.05■■■□□ 2.08
ERCC1-210ENST00000589381 EIF2AK4Q9P2K8 1649 aaKnown RBP28.05■■■□□ 2.08
ERCC1-210ENST00000589381 KIF3BO15066 747 aa28.04■■■□□ 2.08
ERCC1-210ENST00000589381 NCOA1Q15788 1441 aa28.03■■■□□ 2.08
ERCC1-210ENST00000589381 GGT6Q6P531 493 aa28.03■■■□□ 2.08
ERCC1-210ENST00000589381 PTPRMP28827 1452 aa28.02■■■□□ 2.08
ERCC1-210ENST00000589381 PTPRKQ15262 1439 aa28.01■■■□□ 2.08
ERCC1-210ENST00000589381 ERBINQ96RT1 1412 aa27.99■■■□□ 2.07
ERCC1-210ENST00000589381 RNF17Q9BXT8 1623 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms