RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 FRMPD1Q5SYB0 1578 aa22.32■■□□□ 1.16
CLPTM1-210ENST00000589158 ZNF777Q9ULD5 760 aaPredicted RBP22.29■■□□□ 1.16
CLPTM1-210ENST00000589158 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
CLPTM1-210ENST00000589158 POGZQ7Z3K3 1410 aa22.28■■□□□ 1.16
CLPTM1-210ENST00000589158 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
CLPTM1-210ENST00000589158 PREX2Q70Z35 1606 aa22.26■■□□□ 1.15
CLPTM1-210ENST00000589158 GPATCH8Q9UKJ3 1502 aaKnown RBP22.26■■□□□ 1.15
CLPTM1-210ENST00000589158 RICTORQ6R327 1708 aa22.26■■□□□ 1.15
CLPTM1-210ENST00000589158 CFDP1Q9UEE9 299 aaPredicted RBP22.25■■□□□ 1.15
CLPTM1-210ENST00000589158 AFAP1Q8N556 730 aa22.24■■□□□ 1.15
CLPTM1-210ENST00000589158 CDC42BPBQ9Y5S2 1711 aa22.23■■□□□ 1.15
CLPTM1-210ENST00000589158 MYT1LQ9UL68 1186 aa22.23■■□□□ 1.15
CLPTM1-210ENST00000589158 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
CLPTM1-210ENST00000589158 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
CLPTM1-210ENST00000589158 ZMYM4Q5VZL5 1548 aa22.21■■□□□ 1.15
CLPTM1-210ENST00000589158 APLP2Q06481 763 aa22.21■■□□□ 1.15
CLPTM1-210ENST00000589158 ZNF518AQ6AHZ1 1483 aa22.21■■□□□ 1.15
CLPTM1-210ENST00000589158 MAGI2Q86UL8 1455 aa22.21■■□□□ 1.15
CLPTM1-210ENST00000589158 YEATS2Q9ULM3 1422 aa22.2■■□□□ 1.14
CLPTM1-210ENST00000589158 CDC42BPAQ5VT25 1732 aa22.2■■□□□ 1.14
CLPTM1-210ENST00000589158 ZFYVE16Q7Z3T8 1539 aa22.19■■□□□ 1.14
CLPTM1-210ENST00000589158 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
CLPTM1-210ENST00000589158 ABCC1P33527 1531 aa22.17■■□□□ 1.14
CLPTM1-210ENST00000589158 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
CLPTM1-210ENST00000589158 LRRC9Q6ZRR7 1453 aa22.17■■□□□ 1.14
CLPTM1-210ENST00000589158 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
CLPTM1-210ENST00000589158 NCOA2Q15596 1464 aa22.16■■□□□ 1.14
CLPTM1-210ENST00000589158 TRAPPC8Q9Y2L5 1435 aa22.16■■□□□ 1.14
CLPTM1-210ENST00000589158 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.14
CLPTM1-210ENST00000589158 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CLPTM1-210ENST00000589158 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
CLPTM1-210ENST00000589158 ZNF644Q9H582 1327 aaPredicted RBP22.12■■□□□ 1.13
CLPTM1-210ENST00000589158 SUPT6HQ7KZ85 1726 aaKnown RBP22.12■■□□□ 1.13
CLPTM1-210ENST00000589158 KDM5CP41229 1560 aa22.12■■□□□ 1.13
CLPTM1-210ENST00000589158 ATP10AO60312 1499 aa22.11■■□□□ 1.13
CLPTM1-210ENST00000589158 PLEKHH2Q8IVE3 1493 aa22.11■■□□□ 1.13
CLPTM1-210ENST00000589158 SYCP2Q9BX26 1530 aa22.11■■□□□ 1.13
CLPTM1-210ENST00000589158 KIAA1107Q9UPP5 1409 aa22.1■■□□□ 1.13
CLPTM1-210ENST00000589158 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
CLPTM1-210ENST00000589158 MLH3Q9UHC1 1453 aa22.09■■□□□ 1.13
CLPTM1-210ENST00000589158 HECW2Q9P2P5 1572 aa22.08■■□□□ 1.12
CLPTM1-210ENST00000589158 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
CLPTM1-210ENST00000589158 C9orf84Q5VXU9 1444 aa22.07■■□□□ 1.12
CLPTM1-210ENST00000589158 MLECQ14165 292 aa22.07■■□□□ 1.12
CLPTM1-210ENST00000589158 BCORL1Q5H9F3 1711 aa22.01■■□□□ 1.11
CLPTM1-210ENST00000589158 DIP2CQ9Y2E4 1556 aa22.01■■□□□ 1.11
CLPTM1-210ENST00000589158 CAMSAP2Q08AD1 1489 aa22■■□□□ 1.11
CLPTM1-210ENST00000589158 ADAMTSL3P82987 1691 aa22■■□□□ 1.11
CLPTM1-210ENST00000589158 MBD5Q9P267 1494 aa21.99■■□□□ 1.11
CLPTM1-210ENST00000589158 ABCA6Q8N139 1617 aa21.98■■□□□ 1.11
CLPTM1-210ENST00000589158 SIGLEC1Q9BZZ2 1709 aa21.98■■□□□ 1.11
CLPTM1-210ENST00000589158 MYOM3Q5VTT5 1437 aa21.97■■□□□ 1.11
CLPTM1-210ENST00000589158 PTPRMP28827 1452 aa21.96■■□□□ 1.11
CLPTM1-210ENST00000589158 MADDQ8WXG6 1647 aa21.96■■□□□ 1.11
CLPTM1-210ENST00000589158 RSPH4AQ5TD94 716 aa21.96■■□□□ 1.11
CLPTM1-210ENST00000589158 KIDINS220Q9ULH0 1771 aa21.96■■□□□ 1.11
CLPTM1-210ENST00000589158 ATP7AQ04656 1500 aa21.95■■□□□ 1.1
CLPTM1-210ENST00000589158 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
CLPTM1-210ENST00000589158 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
CLPTM1-210ENST00000589158 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
CLPTM1-210ENST00000589158 REREQ9P2R6 1566 aa21.93■■□□□ 1.1
CLPTM1-210ENST00000589158 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
CLPTM1-210ENST00000589158 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
CLPTM1-210ENST00000589158 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
CLPTM1-210ENST00000589158 RTEL1-TNFRSF6BF6WH68 1400 aa21.89■■□□□ 1.1
CLPTM1-210ENST00000589158 AGLP35573 1532 aa21.89■■□□□ 1.09
CLPTM1-210ENST00000589158 A2MP01023 1474 aa21.89■■□□□ 1.09
CLPTM1-210ENST00000589158 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
CLPTM1-210ENST00000589158 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
CLPTM1-210ENST00000589158 ARHGEF5Q12774 1597 aa21.86■■□□□ 1.09
CLPTM1-210ENST00000589158 FGD6Q6ZV73 1430 aa21.83■■□□□ 1.09
CLPTM1-210ENST00000589158 PPARGC1BQ86YN6 1023 aaKnown RBP21.82■■□□□ 1.08
CLPTM1-210ENST00000589158 FER1L4A9Z1Z3 1794 aa21.82■■□□□ 1.08
CLPTM1-210ENST00000589158 CEBPAP49715 358 aaPredicted RBP21.81■■□□□ 1.08
CLPTM1-210ENST00000589158 GGT6Q6P531 493 aa21.81■■□□□ 1.08
CLPTM1-210ENST00000589158 DHX29Q7Z478 1369 aaKnown RBP21.81■■□□□ 1.08
CLPTM1-210ENST00000589158 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
CLPTM1-210ENST00000589158 PLXNC1O60486 1568 aa21.79■■□□□ 1.08
CLPTM1-210ENST00000589158 ADGBQ8N7X0 1667 aa21.78■■□□□ 1.08
CLPTM1-210ENST00000589158 FAM50AQ14320 339 aaKnown RBP21.77■■□□□ 1.08
CLPTM1-210ENST00000589158 KIF3BO15066 747 aa21.76■■□□□ 1.07
CLPTM1-210ENST00000589158 TCOF1Q13428 1488 aaKnown RBP21.76■■□□□ 1.07
CLPTM1-210ENST00000589158 ABCC5O15440 1437 aa21.75■■□□□ 1.07
CLPTM1-210ENST00000589158 CNTLNQ9NXG0 1405 aa21.74■■□□□ 1.07
CLPTM1-210ENST00000589158 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
CLPTM1-210ENST00000589158 DAPK1P53355 1430 aa21.72■■□□□ 1.07
CLPTM1-210ENST00000589158 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
CLPTM1-210ENST00000589158 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
CLPTM1-210ENST00000589158 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
CLPTM1-210ENST00000589158 SHANK2Q9UPX8 1470 aa21.69■■□□□ 1.06
CLPTM1-210ENST00000589158 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
CLPTM1-210ENST00000589158 DNMT1P26358 1616 aaKnown RBP21.67■■□□□ 1.06
CLPTM1-210ENST00000589158 LMTK3Q96Q04 1460 aa21.67■■□□□ 1.06
CLPTM1-210ENST00000589158 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
CLPTM1-210ENST00000589158 HSPA2P54652 639 aa21.65■■□□□ 1.06
CLPTM1-210ENST00000589158 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.05
CLPTM1-210ENST00000589158 ANKRD30AQ9BXX3 1397 aa21.63■■□□□ 1.05
CLPTM1-210ENST00000589158 C3P01024 1663 aa21.63■■□□□ 1.05
CLPTM1-210ENST00000589158 DUOX2Q9NRD8 1548 aa21.63■■□□□ 1.05
CLPTM1-210ENST00000589158 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms