RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 CDC42BPAQ5VT25 1732 aa23.94■■□□□ 1.42
RPRD1A-208ENST00000589050 EFCAB2Q5VUJ9 269 aa23.94■■□□□ 1.42
RPRD1A-208ENST00000589050 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
RPRD1A-208ENST00000589050 CFDP1Q9UEE9 299 aaPredicted RBP23.93■■□□□ 1.42
RPRD1A-208ENST00000589050 NEO1Q92859 1461 aa23.92■■□□□ 1.42
RPRD1A-208ENST00000589050 ITSN2Q9NZM3 1697 aa23.92■■□□□ 1.42
RPRD1A-208ENST00000589050 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
RPRD1A-208ENST00000589050 CDC42BPBQ9Y5S2 1711 aa23.91■■□□□ 1.42
RPRD1A-208ENST00000589050 CFAP74Q9C0B2 1584 aa23.9■■□□□ 1.42
RPRD1A-208ENST00000589050 ZNF777Q9ULD5 760 aaPredicted RBP23.89■■□□□ 1.41
RPRD1A-208ENST00000589050 AKNAQ7Z591 1439 aa23.88■■□□□ 1.41
RPRD1A-208ENST00000589050 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
RPRD1A-208ENST00000589050 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
RPRD1A-208ENST00000589050 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
RPRD1A-208ENST00000589050 SAMD9LQ8IVG5 1584 aa23.82■■□□□ 1.4
RPRD1A-208ENST00000589050 ZNF644Q9H582 1327 aaPredicted RBP23.82■■□□□ 1.4
RPRD1A-208ENST00000589050 SCAPERQ9BY12 1400 aa23.8■■□□□ 1.4
RPRD1A-208ENST00000589050 CAMSAP2Q08AD1 1489 aa23.79■■□□□ 1.4
RPRD1A-208ENST00000589050 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
RPRD1A-208ENST00000589050 ABCC1P33527 1531 aa23.79■■□□□ 1.4
RPRD1A-208ENST00000589050 COL17A1Q9UMD9 1497 aaPredicted RBP23.78■■□□□ 1.4
RPRD1A-208ENST00000589050 KDM6BO15054 1643 aa23.77■■□□□ 1.4
RPRD1A-208ENST00000589050 DENND4BO75064 1496 aaPredicted RBP23.77■■□□□ 1.4
RPRD1A-208ENST00000589050 PTPN23Q9H3S7 1636 aa23.76■■□□□ 1.39
RPRD1A-208ENST00000589050 KIAA1107Q9UPP5 1409 aa23.76■■□□□ 1.39
RPRD1A-208ENST00000589050 SYCP2Q9BX26 1530 aa23.75■■□□□ 1.39
RPRD1A-208ENST00000589050 ARHGEF12Q9NZN5 1544 aa23.75■■□□□ 1.39
RPRD1A-208ENST00000589050 HNRNPMP52272 730 aaKnown RBP eCLIP23.75■■□□□ 1.399e-6■■■■□ 22.2
RPRD1A-208ENST00000589050 RAPGEF3O95398 923 aa23.74■■□□□ 1.39
RPRD1A-208ENST00000589050 POGZQ7Z3K3 1410 aa23.73■■□□□ 1.39
RPRD1A-208ENST00000589050 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
RPRD1A-208ENST00000589050 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
RPRD1A-208ENST00000589050 TRAPPC8Q9Y2L5 1435 aa23.7■■□□□ 1.38
RPRD1A-208ENST00000589050 ZNF518AQ6AHZ1 1483 aa23.69■■□□□ 1.38
RPRD1A-208ENST00000589050 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
RPRD1A-208ENST00000589050 AFAP1Q8N556 730 aa23.69■■□□□ 1.38
RPRD1A-208ENST00000589050 FRMPD1Q5SYB0 1578 aa23.68■■□□□ 1.38
RPRD1A-208ENST00000589050 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
RPRD1A-208ENST00000589050 RICTORQ6R327 1708 aa23.66■■□□□ 1.38
RPRD1A-208ENST00000589050 ARHGEF5Q12774 1597 aa23.65■■□□□ 1.38
RPRD1A-208ENST00000589050 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.38
RPRD1A-208ENST00000589050 RSPH4AQ5TD94 716 aa23.64■■□□□ 1.37
RPRD1A-208ENST00000589050 KDM5CP41229 1560 aa23.62■■□□□ 1.37
RPRD1A-208ENST00000589050 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
RPRD1A-208ENST00000589050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.61■■□□□ 1.37
RPRD1A-208ENST00000589050 MYT1LQ9UL68 1186 aa23.6■■□□□ 1.37
RPRD1A-208ENST00000589050 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 DAPK1P53355 1430 aa23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 TSPY4P0CV99 314 aa23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 TSPY10P0CW01 314 aa23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 DNMT1P26358 1616 aaKnown RBP23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 ABCC5O15440 1437 aa23.59■■□□□ 1.37
RPRD1A-208ENST00000589050 HECW2Q9P2P5 1572 aa23.57■■□□□ 1.36
RPRD1A-208ENST00000589050 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
RPRD1A-208ENST00000589050 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
RPRD1A-208ENST00000589050 ITGAEP38570 1179 aa23.55■■□□□ 1.36
RPRD1A-208ENST00000589050 C9orf84Q5VXU9 1444 aa23.54■■□□□ 1.36
RPRD1A-208ENST00000589050 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
RPRD1A-208ENST00000589050 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
RPRD1A-208ENST00000589050 YEATS2Q9ULM3 1422 aa23.53■■□□□ 1.36
RPRD1A-208ENST00000589050 SHANK2Q9UPX8 1470 aa23.53■■□□□ 1.36
RPRD1A-208ENST00000589050 INO80Q9ULG1 1556 aaPredicted RBP23.52■■□□□ 1.36
RPRD1A-208ENST00000589050 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
RPRD1A-208ENST00000589050 CROCC2H7BZ55 1655 aa23.52■■□□□ 1.36
RPRD1A-208ENST00000589050 MAST1Q9Y2H9 1570 aa23.51■■□□□ 1.35
RPRD1A-208ENST00000589050 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
RPRD1A-208ENST00000589050 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
RPRD1A-208ENST00000589050 ARHGEF40Q8TER5 1519 aa23.49■■□□□ 1.35
RPRD1A-208ENST00000589050 PTPRKQ15262 1439 aa23.49■■□□□ 1.35
RPRD1A-208ENST00000589050 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
RPRD1A-208ENST00000589050 ABCA6Q8N139 1617 aa23.46■■□□□ 1.35
RPRD1A-208ENST00000589050 DIP2CQ9Y2E4 1556 aa23.46■■□□□ 1.35
RPRD1A-208ENST00000589050 ATP10AO60312 1499 aa23.45■■□□□ 1.34
RPRD1A-208ENST00000589050 ANKRD30AQ9BXX3 1397 aa23.43■■□□□ 1.34
RPRD1A-208ENST00000589050 PLXNC1O60486 1568 aa23.42■■□□□ 1.34
RPRD1A-208ENST00000589050 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
RPRD1A-208ENST00000589050 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
RPRD1A-208ENST00000589050 NCOA1Q15788 1441 aa23.41■■□□□ 1.34
RPRD1A-208ENST00000589050 KIF15Q9NS87 1388 aa23.4■■□□□ 1.34
RPRD1A-208ENST00000589050 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.34
RPRD1A-208ENST00000589050 A2MP01023 1474 aa23.39■■□□□ 1.34
RPRD1A-208ENST00000589050 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
RPRD1A-208ENST00000589050 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
RPRD1A-208ENST00000589050 REREQ9P2R6 1566 aa23.36■■□□□ 1.33
RPRD1A-208ENST00000589050 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
RPRD1A-208ENST00000589050 DUOX2Q9NRD8 1548 aa23.34■■□□□ 1.33
RPRD1A-208ENST00000589050 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
RPRD1A-208ENST00000589050 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
RPRD1A-208ENST00000589050 AGLP35573 1532 aa23.29■■□□□ 1.32
RPRD1A-208ENST00000589050 ERBINQ96RT1 1412 aa23.28■■□□□ 1.32
RPRD1A-208ENST00000589050 HFM1A2PYH4 1435 aa23.26■■□□□ 1.31
RPRD1A-208ENST00000589050 ANKRD50Q9ULJ7 1429 aa23.26■■□□□ 1.31
RPRD1A-208ENST00000589050 KIF3BO15066 747 aa23.26■■□□□ 1.31
RPRD1A-208ENST00000589050 NAIPQ13075 1403 aa23.25■■□□□ 1.31
RPRD1A-208ENST00000589050 MLECQ14165 292 aa23.25■■□□□ 1.31
RPRD1A-208ENST00000589050 EIF2AK4Q9P2K8 1649 aaKnown RBP23.23■■□□□ 1.31
RPRD1A-208ENST00000589050 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
RPRD1A-208ENST00000589050 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
RPRD1A-208ENST00000589050 GGT6Q6P531 493 aa23.2■■□□□ 1.3
RPRD1A-208ENST00000589050 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms