RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
GCDH-209ENST00000589039 PPARGC1BQ86YN6 1023 aaKnown RBP23.93■■□□□ 1.42
GCDH-209ENST00000589039 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
GCDH-209ENST00000589039 FANCAO15360 1455 aa23.91■■□□□ 1.42
GCDH-209ENST00000589039 PHLDB1Q86UU1 1377 aa23.91■■□□□ 1.42
GCDH-209ENST00000589039 NEO1Q92859 1461 aa23.9■■□□□ 1.42
GCDH-209ENST00000589039 EFCAB2Q5VUJ9 269 aa23.86■■□□□ 1.41
GCDH-209ENST00000589039 SAMD9LQ8IVG5 1584 aa23.86■■□□□ 1.41
GCDH-209ENST00000589039 MIA2Q96PC5 1412 aa23.85■■□□□ 1.41
GCDH-209ENST00000589039 CFDP1Q9UEE9 299 aaPredicted RBP23.85■■□□□ 1.41
GCDH-209ENST00000589039 AKNAQ7Z591 1439 aa23.84■■□□□ 1.41
GCDH-209ENST00000589039 PTPN23Q9H3S7 1636 aa23.82■■□□□ 1.4
GCDH-209ENST00000589039 FGD6Q6ZV73 1430 aa23.82■■□□□ 1.4
GCDH-209ENST00000589039 ABCC1P33527 1531 aa23.81■■□□□ 1.4
GCDH-209ENST00000589039 CAMSAP2Q08AD1 1489 aa23.8■■□□□ 1.4
GCDH-209ENST00000589039 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
GCDH-209ENST00000589039 PLEKHH2Q8IVE3 1493 aa23.79■■□□□ 1.4
GCDH-209ENST00000589039 KDM6BO15054 1643 aa23.78■■□□□ 1.4
GCDH-209ENST00000589039 TCOF1Q13428 1488 aaKnown RBP23.77■■□□□ 1.4
GCDH-209ENST00000589039 ZNF777Q9ULD5 760 aaPredicted RBP23.77■■□□□ 1.4
GCDH-209ENST00000589039 RICTORQ6R327 1708 aa23.76■■□□□ 1.39
GCDH-209ENST00000589039 FRMPD1Q5SYB0 1578 aa23.76■■□□□ 1.39
GCDH-209ENST00000589039 SYCP2Q9BX26 1530 aa23.75■■□□□ 1.39
GCDH-209ENST00000589039 KIAA1107Q9UPP5 1409 aa23.75■■□□□ 1.39
GCDH-209ENST00000589039 SCAPERQ9BY12 1400 aa23.74■■□□□ 1.39
GCDH-209ENST00000589039 ZNF644Q9H582 1327 aaPredicted RBP23.73■■□□□ 1.39
GCDH-209ENST00000589039 ARHGEF12Q9NZN5 1544 aa23.73■■□□□ 1.39
GCDH-209ENST00000589039 ARHGEF5Q12774 1597 aa23.71■■□□□ 1.39
GCDH-209ENST00000589039 DENND4BO75064 1496 aaPredicted RBP23.71■■□□□ 1.39
GCDH-209ENST00000589039 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
GCDH-209ENST00000589039 COL17A1Q9UMD9 1497 aaPredicted RBP23.7■■□□□ 1.38
GCDH-209ENST00000589039 MBD5Q9P267 1494 aa23.69■■□□□ 1.38
GCDH-209ENST00000589039 POGZQ7Z3K3 1410 aa23.68■■□□□ 1.38
GCDH-209ENST00000589039 DNMT1P26358 1616 aaKnown RBP23.67■■□□□ 1.38
GCDH-209ENST00000589039 ZNF518AQ6AHZ1 1483 aa23.67■■□□□ 1.38
GCDH-209ENST00000589039 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
GCDH-209ENST00000589039 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.66■■□□□ 1.38
GCDH-209ENST00000589039 KDM5CP41229 1560 aa23.66■■□□□ 1.38
GCDH-209ENST00000589039 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
GCDH-209ENST00000589039 TRAPPC8Q9Y2L5 1435 aa23.65■■□□□ 1.38
GCDH-209ENST00000589039 CCDC141Q6ZP82 1450 aa23.64■■□□□ 1.38
GCDH-209ENST00000589039 ZMYM4Q5VZL5 1548 aa23.64■■□□□ 1.37
GCDH-209ENST00000589039 RSPH4AQ5TD94 716 aa23.63■■□□□ 1.37
GCDH-209ENST00000589039 FAM50AQ14320 339 aaKnown RBP23.62■■□□□ 1.37
GCDH-209ENST00000589039 RAPGEF3O95398 923 aa23.61■■□□□ 1.37
GCDH-209ENST00000589039 HECW2Q9P2P5 1572 aa23.6■■□□□ 1.37
GCDH-209ENST00000589039 AFAP1Q8N556 730 aa23.59■■□□□ 1.37
GCDH-209ENST00000589039 DAPK1P53355 1430 aa23.59■■□□□ 1.37
GCDH-209ENST00000589039 KIDINS220Q9ULH0 1771 aa23.58■■□□□ 1.37
GCDH-209ENST00000589039 INO80Q9ULG1 1556 aaPredicted RBP23.58■■□□□ 1.37
GCDH-209ENST00000589039 MAST1Q9Y2H9 1570 aa23.58■■□□□ 1.37
GCDH-209ENST00000589039 ABCC5O15440 1437 aa23.57■■□□□ 1.36
GCDH-209ENST00000589039 SHANK2Q9UPX8 1470 aa23.56■■□□□ 1.36
GCDH-209ENST00000589039 MAGI2Q86UL8 1455 aa23.56■■□□□ 1.36
GCDH-209ENST00000589039 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
GCDH-209ENST00000589039 ARHGEF40Q8TER5 1519 aa23.55■■□□□ 1.36
GCDH-209ENST00000589039 ADGBQ8N7X0 1667 aa23.55■■□□□ 1.36
GCDH-209ENST00000589039 ATP7AQ04656 1500 aa23.54■■□□□ 1.36
GCDH-209ENST00000589039 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
GCDH-209ENST00000589039 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
GCDH-209ENST00000589039 TSPY4P0CV99 314 aa23.52■■□□□ 1.36
GCDH-209ENST00000589039 TSPY10P0CW01 314 aa23.52■■□□□ 1.36
GCDH-209ENST00000589039 SPAG9O60271 1321 aaKnown RBP23.52■■□□□ 1.36
GCDH-209ENST00000589039 C9orf84Q5VXU9 1444 aa23.51■■□□□ 1.35
GCDH-209ENST00000589039 ABCA6Q8N139 1617 aa23.5■■□□□ 1.35
GCDH-209ENST00000589039 PLXNC1O60486 1568 aa23.49■■□□□ 1.35
GCDH-209ENST00000589039 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
GCDH-209ENST00000589039 PTPRKQ15262 1439 aa23.47■■□□□ 1.35
GCDH-209ENST00000589039 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
GCDH-209ENST00000589039 YEATS2Q9ULM3 1422 aa23.45■■□□□ 1.34
GCDH-209ENST00000589039 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
GCDH-209ENST00000589039 SIGLEC1Q9BZZ2 1709 aa23.43■■□□□ 1.34
GCDH-209ENST00000589039 ITGAEP38570 1179 aa23.43■■□□□ 1.34
GCDH-209ENST00000589039 REREQ9P2R6 1566 aa23.41■■□□□ 1.34
GCDH-209ENST00000589039 CHIC2Q9UKJ5 165 aa23.4■■□□□ 1.34
GCDH-209ENST00000589039 ATP10AO60312 1499 aa23.4■■□□□ 1.34
GCDH-209ENST00000589039 NCOA1Q15788 1441 aa23.4■■□□□ 1.34
GCDH-209ENST00000589039 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
GCDH-209ENST00000589039 ANKRD30AQ9BXX3 1397 aa23.4■■□□□ 1.34
GCDH-209ENST00000589039 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
GCDH-209ENST00000589039 TRIM26Q12899 539 aaPredicted RBP23.36■■□□□ 1.33
GCDH-209ENST00000589039 DUOX2Q9NRD8 1548 aa23.36■■□□□ 1.33
GCDH-209ENST00000589039 A2MP01023 1474 aa23.36■■□□□ 1.33
GCDH-209ENST00000589039 KIF15Q9NS87 1388 aa23.35■■□□□ 1.33
GCDH-209ENST00000589039 BCORL1Q5H9F3 1711 aa23.33■■□□□ 1.33
GCDH-209ENST00000589039 EIF2AK4Q9P2K8 1649 aaKnown RBP23.33■■□□□ 1.32
GCDH-209ENST00000589039 RRP7BPQ9NSQ0 103 aa23.32■■□□□ 1.32
GCDH-209ENST00000589039 DHX29Q7Z478 1369 aaKnown RBP23.31■■□□□ 1.32
GCDH-209ENST00000589039 AGLP35573 1532 aa23.31■■□□□ 1.32
GCDH-209ENST00000589039 AEBP2Q6ZN18 517 aaPredicted RBP23.29■■□□□ 1.32
GCDH-209ENST00000589039 ERBINQ96RT1 1412 aa23.29■■□□□ 1.32
GCDH-209ENST00000589039 HFM1A2PYH4 1435 aa23.28■■□□□ 1.32
GCDH-209ENST00000589039 NAIPQ13075 1403 aa23.26■■□□□ 1.31
GCDH-209ENST00000589039 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
GCDH-209ENST00000589039 RNF17Q9BXT8 1623 aaKnown RBP23.23■■□□□ 1.31
GCDH-209ENST00000589039 DEPDC5O75140 1603 aa23.22■■□□□ 1.31
GCDH-209ENST00000589039 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
GCDH-209ENST00000589039 UNC13BO14795 1591 aa23.18■■□□□ 1.3
GCDH-209ENST00000589039 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
GCDH-209ENST00000589039 KIF3BO15066 747 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms