RNA–Protein interactions for RNA: ENST00000589029.1

FAM98C-208, Transcript of family with sequence similarity 98 member C, human

TSL 3

Gene FAM98C, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM98C-208	ENST00000589029	FRMPD1	Q5SYB0	1578 aa		32.66	■■■□□ 2.82
FAM98C-208	ENST00000589029	RICTOR	Q6R327	1708 aa		32.65	■■■□□ 2.82
FAM98C-208	ENST00000589029	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.65	■■■□□ 2.82
FAM98C-208	ENST00000589029	KANK4	Q5T7N3	995 aa	Predicted RBP	32.65	■■■□□ 2.82
FAM98C-208	ENST00000589029	ARHGAP5	Q13017	1502 aa		32.65	■■■□□ 2.82
FAM98C-208	ENST00000589029	EFCAB2	Q5VUJ9	269 aa		32.64	■■■□□ 2.82
FAM98C-208	ENST00000589029	NCOA2	Q15596	1464 aa		32.61	■■■□□ 2.81
FAM98C-208	ENST00000589029	ADGRL1	O94910	1474 aa		32.59	■■■□□ 2.81
FAM98C-208	ENST00000589029	RAPGEF3	O95398	923 aa		32.58	■■■□□ 2.81
FAM98C-208	ENST00000589029	DENND4B	O75064	1496 aa	Predicted RBP	32.57	■■■□□ 2.8
FAM98C-208	ENST00000589029	CCNB3	Q8WWL7	1395 aa		32.56	■■■□□ 2.8
FAM98C-208	ENST00000589029	ITSN2	Q9NZM3	1697 aa		32.56	■■■□□ 2.8
FAM98C-208	ENST00000589029	SCAPER	Q9BY12	1400 aa		32.55	■■■□□ 2.8
FAM98C-208	ENST00000589029	SAMD9L	Q8IVG5	1584 aa		32.54	■■■□□ 2.8
FAM98C-208	ENST00000589029	ABCC1	P33527	1531 aa		32.53	■■■□□ 2.8
FAM98C-208	ENST00000589029	ARHGEF12	Q9NZN5	1544 aa		32.51	■■■□□ 2.8
FAM98C-208	ENST00000589029	POGZ	Q7Z3K3	1410 aa		32.51	■■■□□ 2.79
FAM98C-208	ENST00000589029	ZMYM4	Q5VZL5	1548 aa		32.5	■■■□□ 2.79
FAM98C-208	ENST00000589029	APLP2	Q06481	763 aa		32.47	■■■□□ 2.79
FAM98C-208	ENST00000589029	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.46	■■■□□ 2.79
FAM98C-208	ENST00000589029	KDM5C	P41229	1560 aa		32.44	■■■□□ 2.78
FAM98C-208	ENST00000589029	KIAA1107	Q9UPP5	1409 aa		32.41	■■■□□ 2.78
FAM98C-208	ENST00000589029	TRAPPC8	Q9Y2L5	1435 aa		32.4	■■■□□ 2.78
FAM98C-208	ENST00000589029	ZNF518A	Q6AHZ1	1483 aa		32.4	■■■□□ 2.78
FAM98C-208	ENST00000589029	SYCP2	Q9BX26	1530 aa		32.38	■■■□□ 2.77
FAM98C-208	ENST00000589029	MAGI2	Q86UL8	1455 aa		32.37	■■■□□ 2.77
FAM98C-208	ENST00000589029	PLEKHH2	Q8IVE3	1493 aa		32.37	■■■□□ 2.77
FAM98C-208	ENST00000589029	ZNF644	Q9H582	1327 aa	Predicted RBP	32.37	■■■□□ 2.77
FAM98C-208	ENST00000589029	AFAP1	Q8N556	730 aa		32.37	■■■□□ 2.77
FAM98C-208	ENST00000589029	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.37	■■■□□ 2.77
FAM98C-208	ENST00000589029	ARHGEF40	Q8TER5	1519 aa		32.36	■■■□□ 2.77
FAM98C-208	ENST00000589029	MYOM3	Q5VTT5	1437 aa		32.34	■■■□□ 2.77
FAM98C-208	ENST00000589029	MBD5	Q9P267	1494 aa		32.33	■■■□□ 2.77
FAM98C-208	ENST00000589029	YEATS2	Q9ULM3	1422 aa		32.32	■■■□□ 2.76
FAM98C-208	ENST00000589029	ZFYVE16	Q7Z3T8	1539 aa		32.31	■■■□□ 2.76
FAM98C-208	ENST00000589029	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.31	■■■□□ 2.76
FAM98C-208	ENST00000589029	CAMSAP2	Q08AD1	1489 aa		32.3	■■■□□ 2.76
FAM98C-208	ENST00000589029	MLH3	Q9UHC1	1453 aa		32.3	■■■□□ 2.76
FAM98C-208	ENST00000589029	MIA2	Q96PC5	1412 aa		32.3	■■■□□ 2.76
FAM98C-208	ENST00000589029	HECW2	Q9P2P5	1572 aa		32.3	■■■□□ 2.76
FAM98C-208	ENST00000589029	KIDINS220	Q9ULH0	1771 aa		32.28	■■■□□ 2.76
FAM98C-208	ENST00000589029	SIGLEC1	Q9BZZ2	1709 aa		32.27	■■■□□ 2.76
FAM98C-208	ENST00000589029	ABCA6	Q8N139	1617 aa		32.22	■■■□□ 2.75
FAM98C-208	ENST00000589029	ARHGEF5	Q12774	1597 aa		32.21	■■■□□ 2.75
FAM98C-208	ENST00000589029	INO80	Q9ULG1	1556 aa	Predicted RBP	32.21	■■■□□ 2.75
FAM98C-208	ENST00000589029	DIP2C	Q9Y2E4	1556 aa		32.21	■■■□□ 2.75
FAM98C-208	ENST00000589029	PTPN23	Q9H3S7	1636 aa		32.18	■■■□□ 2.74
FAM98C-208	ENST00000589029	ATP10A	O60312	1499 aa		32.18	■■■□□ 2.74
FAM98C-208	ENST00000589029	FGD6	Q6ZV73	1430 aa		32.17	■■■□□ 2.74
FAM98C-208	ENST00000589029	KDM4F	A0A1W2PPD8	638 aa		32.17	■■■□□ 2.74
FAM98C-208	ENST00000589029	TCOF1	Q13428	1488 aa	Known RBP	32.16	■■■□□ 2.74
FAM98C-208	ENST00000589029	RERE	Q9P2R6	1566 aa		32.15	■■■□□ 2.74
FAM98C-208	ENST00000589029	CCDC141	Q6ZP82	1450 aa		32.14	■■■□□ 2.74
FAM98C-208	ENST00000589029	ATP7A	Q04656	1500 aa		32.14	■■■□□ 2.74
FAM98C-208	ENST00000589029	SPAG9	O60271	1321 aa	Known RBP	32.13	■■■□□ 2.73
FAM98C-208	ENST00000589029	RSPH4A	Q5TD94	716 aa		32.12	■■■□□ 2.73
FAM98C-208	ENST00000589029	C9orf84	Q5VXU9	1444 aa		32.11	■■■□□ 2.73
FAM98C-208	ENST00000589029	BCORL1	Q5H9F3	1711 aa		32.1	■■■□□ 2.73
FAM98C-208	ENST00000589029	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.09	■■■□□ 2.73
FAM98C-208	ENST00000589029	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.08	■■■□□ 2.73
FAM98C-208	ENST00000589029	ADAMTSL3	P82987	1691 aa		32.08	■■■□□ 2.73
FAM98C-208	ENST00000589029	MAST1	Q9Y2H9	1570 aa		32.06	■■■□□ 2.72
FAM98C-208	ENST00000589029	CROCC2	H7BZ55	1655 aa		32.04	■■■□□ 2.72
FAM98C-208	ENST00000589029	ADGB	Q8N7X0	1667 aa		32.03	■■■□□ 2.72
FAM98C-208	ENST00000589029	DNMT1	P26358	1616 aa	Known RBP	32.02	■■■□□ 2.72
FAM98C-208	ENST00000589029	AGL	P35573	1532 aa		32.01	■■■□□ 2.72
FAM98C-208	ENST00000589029	MYT1L	Q9UL68	1186 aa		32.01	■■■□□ 2.71
FAM98C-208	ENST00000589029	PLXNC1	O60486	1568 aa		32.01	■■■□□ 2.71
FAM98C-208	ENST00000589029	ABCC5	O15440	1437 aa		32	■■■□□ 2.71
FAM98C-208	ENST00000589029	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.97	■■■□□ 2.71
FAM98C-208	ENST00000589029	DAPK1	P53355	1430 aa		31.95	■■■□□ 2.71
FAM98C-208	ENST00000589029	A2M	P01023	1474 aa		31.95	■■■□□ 2.7
FAM98C-208	ENST00000589029	SHANK2	Q9UPX8	1470 aa		31.94	■■■□□ 2.7
FAM98C-208	ENST00000589029	TSPY4	P0CV99	314 aa		31.93	■■■□□ 2.7
FAM98C-208	ENST00000589029	TSPY10	P0CW01	314 aa		31.93	■■■□□ 2.7
FAM98C-208	ENST00000589029	MADD	Q8WXG6	1647 aa		31.93	■■■□□ 2.7
FAM98C-208	ENST00000589029	DHX29	Q7Z478	1369 aa	Known RBP	31.87	■■■□□ 2.69
FAM98C-208	ENST00000589029	FER1L4	A9Z1Z3	1794 aa		31.86	■■■□□ 2.69
FAM98C-208	ENST00000589029	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.86	■■■□□ 2.69
FAM98C-208	ENST00000589029	RRBP1	Q9P2E9	1410 aa	Known RBP	31.84	■■■□□ 2.69
FAM98C-208	ENST00000589029	FAM50A	Q14320	339 aa	Known RBP	31.84	■■■□□ 2.69
FAM98C-208	ENST00000589029	RIMS1	Q86UR5	1692 aa	Known RBP	31.83	■■■□□ 2.69
FAM98C-208	ENST00000589029	MLEC	Q14165	292 aa		31.81	■■■□□ 2.68
FAM98C-208	ENST00000589029	PTPRK	Q15262	1439 aa		31.8	■■■□□ 2.68
FAM98C-208	ENST00000589029	PTPRM	P28827	1452 aa		31.79	■■■□□ 2.68
FAM98C-208	ENST00000589029	ADGRL2	O95490	1459 aa		31.78	■■■□□ 2.68
FAM98C-208	ENST00000589029	NCOA1	Q15788	1441 aa		31.75	■■■□□ 2.67
FAM98C-208	ENST00000589029	DUOX2	Q9NRD8	1548 aa		31.75	■■■□□ 2.67
FAM98C-208	ENST00000589029	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.75	■■■□□ 2.67
FAM98C-208	ENST00000589029	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.74	■■■□□ 2.67
FAM98C-208	ENST00000589029	KIF15	Q9NS87	1388 aa		31.71	■■■□□ 2.67
FAM98C-208	ENST00000589029	CHIC2	Q9UKJ5	165 aa		31.71	■■■□□ 2.67
FAM98C-208	ENST00000589029	RNF17	Q9BXT8	1623 aa	Known RBP	31.7	■■■□□ 2.66
FAM98C-208	ENST00000589029	ANKRD30A	Q9BXX3	1397 aa		31.69	■■■□□ 2.66
FAM98C-208	ENST00000589029	RRP7BP	Q9NSQ0	103 aa		31.68	■■■□□ 2.66
FAM98C-208	ENST00000589029	KIF3B	O15066	747 aa		31.66	■■■□□ 2.66
FAM98C-208	ENST00000589029	MROH2A	A6NES4	1674 aa		31.66	■■■□□ 2.66
FAM98C-208	ENST00000589029	MROH1	Q8NDA8	1641 aa		31.65	■■■□□ 2.66
FAM98C-208	ENST00000589029	ERBIN	Q96RT1	1412 aa		31.65	■■■□□ 2.66
FAM98C-208	ENST00000589029	C3	P01024	1663 aa		31.64	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms