RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 LRRC9Q6ZRR7 1453 aa27.69■■■□□ 2.02
DNMT1-215ENST00000588913 GPATCH8Q9UKJ3 1502 aaKnown RBP27.69■■■□□ 2.02
DNMT1-215ENST00000588913 RICTORQ6R327 1708 aa27.68■■■□□ 2.02
DNMT1-215ENST00000588913 MAP3K1Q13233 1512 aa27.67■■■□□ 2.02
DNMT1-215ENST00000588913 PHLDB1Q86UU1 1377 aa27.66■■■□□ 2.02
DNMT1-215ENST00000588913 ADGRL1O94910 1474 aa27.64■■■□□ 2.01
DNMT1-215ENST00000588913 NCOA2Q15596 1464 aa27.63■■■□□ 2.01
DNMT1-215ENST00000588913 SUPT6HQ7KZ85 1726 aaKnown RBP27.63■■■□□ 2.01
DNMT1-215ENST00000588913 EFCAB2Q5VUJ9 269 aa27.61■■■□□ 2.01
DNMT1-215ENST00000588913 ARHGEF12Q9NZN5 1544 aa27.61■■■□□ 2.01
DNMT1-215ENST00000588913 SCAPERQ9BY12 1400 aa27.6■■■□□ 2.01
DNMT1-215ENST00000588913 SAMD9LQ8IVG5 1584 aa27.6■■■□□ 2.01
DNMT1-215ENST00000588913 DENND4BO75064 1496 aaPredicted RBP27.6■■■□□ 2.01
DNMT1-215ENST00000588913 CCNB3Q8WWL7 1395 aa27.58■■■□□ 2
DNMT1-215ENST00000588913 ABCC1P33527 1531 aa27.57■■■□□ 2
DNMT1-215ENST00000588913 POGZQ7Z3K3 1410 aa27.55■■■□□ 2
DNMT1-215ENST00000588913 ITSN2Q9NZM3 1697 aa27.55■■■□□ 2
DNMT1-215ENST00000588913 ZMYM4Q5VZL5 1548 aa27.51■■□□□ 1.99
DNMT1-215ENST00000588913 ZNF777Q9ULD5 760 aaPredicted RBP27.51■■□□□ 1.99
DNMT1-215ENST00000588913 ZNF644Q9H582 1327 aaPredicted RBP27.51■■□□□ 1.99
DNMT1-215ENST00000588913 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
DNMT1-215ENST00000588913 SYCP2Q9BX26 1530 aa27.49■■□□□ 1.99
DNMT1-215ENST00000588913 CFDP1Q9UEE9 299 aaPredicted RBP27.48■■□□□ 1.99
DNMT1-215ENST00000588913 AFAP1Q8N556 730 aa27.48■■□□□ 1.99
DNMT1-215ENST00000588913 YEATS2Q9ULM3 1422 aa27.48■■□□□ 1.99
DNMT1-215ENST00000588913 KDM5CP41229 1560 aa27.46■■□□□ 1.99
DNMT1-215ENST00000588913 SIGLEC1Q9BZZ2 1709 aa27.45■■□□□ 1.99
DNMT1-215ENST00000588913 ARHGEF40Q8TER5 1519 aa27.45■■□□□ 1.99
DNMT1-215ENST00000588913 APLP2Q06481 763 aa27.45■■□□□ 1.98
DNMT1-215ENST00000588913 ZNF518AQ6AHZ1 1483 aa27.43■■□□□ 1.98
DNMT1-215ENST00000588913 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
DNMT1-215ENST00000588913 ZFYVE16Q7Z3T8 1539 aa27.4■■□□□ 1.98
DNMT1-215ENST00000588913 CAMSAP2Q08AD1 1489 aa27.39■■□□□ 1.97
DNMT1-215ENST00000588913 MBD5Q9P267 1494 aa27.38■■□□□ 1.97
DNMT1-215ENST00000588913 MYOM3Q5VTT5 1437 aa27.37■■□□□ 1.97
DNMT1-215ENST00000588913 KIAA1107Q9UPP5 1409 aa27.37■■□□□ 1.97
DNMT1-215ENST00000588913 HECW2Q9P2P5 1572 aa27.37■■□□□ 1.97
DNMT1-215ENST00000588913 KIDINS220Q9ULH0 1771 aa27.36■■□□□ 1.97
DNMT1-215ENST00000588913 KDM4FA0A1W2PPD8 638 aa27.36■■□□□ 1.97
DNMT1-215ENST00000588913 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
DNMT1-215ENST00000588913 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
DNMT1-215ENST00000588913 MAGI2Q86UL8 1455 aa27.35■■□□□ 1.97
DNMT1-215ENST00000588913 PLEKHH2Q8IVE3 1493 aa27.33■■□□□ 1.97
DNMT1-215ENST00000588913 DIP2CQ9Y2E4 1556 aa27.33■■□□□ 1.97
DNMT1-215ENST00000588913 MLH3Q9UHC1 1453 aa27.31■■□□□ 1.96
DNMT1-215ENST00000588913 INO80Q9ULG1 1556 aaPredicted RBP27.29■■□□□ 1.96
DNMT1-215ENST00000588913 MIA2Q96PC5 1412 aa27.27■■□□□ 1.96
DNMT1-215ENST00000588913 PTPN23Q9H3S7 1636 aa27.26■■□□□ 1.95
DNMT1-215ENST00000588913 ATP10AO60312 1499 aa27.25■■□□□ 1.95
DNMT1-215ENST00000588913 FGD6Q6ZV73 1430 aa27.24■■□□□ 1.95
DNMT1-215ENST00000588913 ATP7AQ04656 1500 aa27.24■■□□□ 1.95
DNMT1-215ENST00000588913 ARHGEF5Q12774 1597 aa27.24■■□□□ 1.95
DNMT1-215ENST00000588913 CCDC141Q6ZP82 1450 aa27.22■■□□□ 1.95
DNMT1-215ENST00000588913 BCORL1Q5H9F3 1711 aa27.22■■□□□ 1.95
DNMT1-215ENST00000588913 SPAG9O60271 1321 aaKnown RBP27.22■■□□□ 1.95
DNMT1-215ENST00000588913 C9orf84Q5VXU9 1444 aa27.21■■□□□ 1.95
DNMT1-215ENST00000588913 MYT1LQ9UL68 1186 aa27.2■■□□□ 1.95
DNMT1-215ENST00000588913 ADAMTSL3P82987 1691 aa27.19■■□□□ 1.94
DNMT1-215ENST00000588913 TCOF1Q13428 1488 aaKnown RBP27.19■■□□□ 1.94
DNMT1-215ENST00000588913 REREQ9P2R6 1566 aa27.17■■□□□ 1.94
DNMT1-215ENST00000588913 ARID4BQ4LE39 1312 aaPredicted RBP27.16■■□□□ 1.94
DNMT1-215ENST00000588913 ADGBQ8N7X0 1667 aa27.15■■□□□ 1.94
DNMT1-215ENST00000588913 MADDQ8WXG6 1647 aa27.14■■□□□ 1.94
DNMT1-215ENST00000588913 CROCC2H7BZ55 1655 aa27.13■■□□□ 1.93
DNMT1-215ENST00000588913 ABCC5O15440 1437 aa27.12■■□□□ 1.93
DNMT1-215ENST00000588913 PLXNC1O60486 1568 aa27.11■■□□□ 1.93
DNMT1-215ENST00000588913 DNMT1P26358 1616 aaKnown RBP27.1■■□□□ 1.93
DNMT1-215ENST00000588913 RTEL1-TNFRSF6BF6WH68 1400 aa27.1■■□□□ 1.93
DNMT1-215ENST00000588913 MAST1Q9Y2H9 1570 aa27.1■■□□□ 1.93
DNMT1-215ENST00000588913 MLECQ14165 292 aa27.09■■□□□ 1.93
DNMT1-215ENST00000588913 AGLP35573 1532 aa27.07■■□□□ 1.92
DNMT1-215ENST00000588913 A2MP01023 1474 aa27.07■■□□□ 1.92
DNMT1-215ENST00000588913 DAPK1P53355 1430 aa27.06■■□□□ 1.92
DNMT1-215ENST00000588913 RIMS1Q86UR5 1692 aaKnown RBP27.05■■□□□ 1.92
DNMT1-215ENST00000588913 RSPH4AQ5TD94 716 aa27.05■■□□□ 1.92
DNMT1-215ENST00000588913 FER1L4A9Z1Z3 1794 aa27.03■■□□□ 1.92
DNMT1-215ENST00000588913 FAM50AQ14320 339 aaKnown RBP27.02■■□□□ 1.92
DNMT1-215ENST00000588913 AEBP2Q6ZN18 517 aaPredicted RBP27.01■■□□□ 1.91
DNMT1-215ENST00000588913 TSPY4P0CV99 314 aa27■■□□□ 1.91
DNMT1-215ENST00000588913 TSPY10P0CW01 314 aa27■■□□□ 1.91
DNMT1-215ENST00000588913 SHANK2Q9UPX8 1470 aa27■■□□□ 1.91
DNMT1-215ENST00000588913 PTPRKQ15262 1439 aa26.99■■□□□ 1.91
DNMT1-215ENST00000588913 HRCP23327 699 aa26.99■■□□□ 1.91
DNMT1-215ENST00000588913 PTPRMP28827 1452 aa26.98■■□□□ 1.91
DNMT1-215ENST00000588913 DHX29Q7Z478 1369 aaKnown RBP26.97■■□□□ 1.91
DNMT1-215ENST00000588913 CHIC2Q9UKJ5 165 aa26.95■■□□□ 1.9
DNMT1-215ENST00000588913 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
DNMT1-215ENST00000588913 RRP7BPQ9NSQ0 103 aa26.89■■□□□ 1.89
DNMT1-215ENST00000588913 KIF15Q9NS87 1388 aa26.88■■□□□ 1.89
DNMT1-215ENST00000588913 ADGRL2O95490 1459 aa26.87■■□□□ 1.89
DNMT1-215ENST00000588913 NCOA1Q15788 1441 aa26.86■■□□□ 1.89
DNMT1-215ENST00000588913 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
DNMT1-215ENST00000588913 DUOX2Q9NRD8 1548 aa26.86■■□□□ 1.89
DNMT1-215ENST00000588913 CLTCQ00610 1675 aaKnown RBP26.85■■□□□ 1.89
DNMT1-215ENST00000588913 KIF3BO15066 747 aa26.85■■□□□ 1.89
DNMT1-215ENST00000588913 GGT6Q6P531 493 aa26.85■■□□□ 1.89
DNMT1-215ENST00000588913 MROH1Q8NDA8 1641 aa26.84■■□□□ 1.89
DNMT1-215ENST00000588913 CEBPAP49715 358 aaPredicted RBP26.84■■□□□ 1.89
DNMT1-215ENST00000588913 C3P01024 1663 aa26.84■■□□□ 1.89
DNMT1-215ENST00000588913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms