RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
SCAMP4-211ENST00000588907 CDC42BPBQ9Y5S2 1711 aa26.06■■□□□ 1.76
SCAMP4-211ENST00000588907 CFDP1Q9UEE9 299 aaPredicted RBP26.05■■□□□ 1.76
SCAMP4-211ENST00000588907 FGD6Q6ZV73 1430 aa26.05■■□□□ 1.76
SCAMP4-211ENST00000588907 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
SCAMP4-211ENST00000588907 FANCAO15360 1455 aa26.03■■□□□ 1.76
SCAMP4-211ENST00000588907 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
SCAMP4-211ENST00000588907 NEO1Q92859 1461 aa26.02■■□□□ 1.76
SCAMP4-211ENST00000588907 PLEKHH2Q8IVE3 1493 aa26■■□□□ 1.75
SCAMP4-211ENST00000588907 RRBP1Q9P2E9 1410 aaKnown RBP25.98■■□□□ 1.75
SCAMP4-211ENST00000588907 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
SCAMP4-211ENST00000588907 PTPN23Q9H3S7 1636 aa25.97■■□□□ 1.75
SCAMP4-211ENST00000588907 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
SCAMP4-211ENST00000588907 TSPOAP1O95153 1857 aa25.96■■□□□ 1.75
SCAMP4-211ENST00000588907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.759e-7■■■□□ 16.5
SCAMP4-211ENST00000588907 CAMSAP2Q08AD1 1489 aa25.94■■□□□ 1.74
SCAMP4-211ENST00000588907 KIAA1107Q9UPP5 1409 aa25.93■■□□□ 1.74
SCAMP4-211ENST00000588907 SAMD9LQ8IVG5 1584 aa25.93■■□□□ 1.74
SCAMP4-211ENST00000588907 AKNAQ7Z591 1439 aa25.91■■□□□ 1.74
SCAMP4-211ENST00000588907 ABCC1P33527 1531 aa25.91■■□□□ 1.74
SCAMP4-211ENST00000588907 ZNF777Q9ULD5 760 aaPredicted RBP25.9■■□□□ 1.74
SCAMP4-211ENST00000588907 ADGRL1O94910 1474 aa25.9■■□□□ 1.74
SCAMP4-211ENST00000588907 RSPH4AQ5TD94 716 aa25.87■■□□□ 1.73
SCAMP4-211ENST00000588907 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
SCAMP4-211ENST00000588907 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
SCAMP4-211ENST00000588907 FAM50AQ14320 339 aaKnown RBP25.84■■□□□ 1.73
SCAMP4-211ENST00000588907 SCAPERQ9BY12 1400 aa25.82■■□□□ 1.72
SCAMP4-211ENST00000588907 ZNF644Q9H582 1327 aaPredicted RBP25.82■■□□□ 1.72
SCAMP4-211ENST00000588907 DENND4BO75064 1496 aaPredicted RBP25.8■■□□□ 1.72
SCAMP4-211ENST00000588907 ZNF518AQ6AHZ1 1483 aa25.8■■□□□ 1.72
SCAMP4-211ENST00000588907 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
SCAMP4-211ENST00000588907 MBD5Q9P267 1494 aa25.8■■□□□ 1.72
SCAMP4-211ENST00000588907 DNMT1P26358 1616 aaKnown RBP25.8■■□□□ 1.72
SCAMP4-211ENST00000588907 POGZQ7Z3K3 1410 aa25.78■■□□□ 1.72
SCAMP4-211ENST00000588907 SHANK2Q9UPX8 1470 aa25.76■■□□□ 1.71
SCAMP4-211ENST00000588907 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
SCAMP4-211ENST00000588907 DAPK1P53355 1430 aa25.75■■□□□ 1.71
SCAMP4-211ENST00000588907 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
SCAMP4-211ENST00000588907 CROCC2H7BZ55 1655 aa25.74■■□□□ 1.71
SCAMP4-211ENST00000588907 HNRNPMP52272 730 aaKnown RBP eCLIP25.74■■□□□ 1.71
SCAMP4-211ENST00000588907 RICTORQ6R327 1708 aa25.73■■□□□ 1.71
SCAMP4-211ENST00000588907 KDM5CP41229 1560 aa25.73■■□□□ 1.71
SCAMP4-211ENST00000588907 ABCC5O15440 1437 aa25.71■■□□□ 1.71
SCAMP4-211ENST00000588907 TRAPPC8Q9Y2L5 1435 aa25.71■■□□□ 1.71
SCAMP4-211ENST00000588907 TSPY4P0CV99 314 aa25.71■■□□□ 1.71
SCAMP4-211ENST00000588907 TSPY10P0CW01 314 aa25.71■■□□□ 1.71
SCAMP4-211ENST00000588907 KDM6BO15054 1643 aa25.7■■□□□ 1.71
SCAMP4-211ENST00000588907 MAST1Q9Y2H9 1570 aa25.7■■□□□ 1.71
SCAMP4-211ENST00000588907 ZMYM4Q5VZL5 1548 aa25.69■■□□□ 1.7
SCAMP4-211ENST00000588907 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
SCAMP4-211ENST00000588907 C9orf84Q5VXU9 1444 aa25.67■■□□□ 1.7
SCAMP4-211ENST00000588907 MAGI2Q86UL8 1455 aa25.66■■□□□ 1.7
SCAMP4-211ENST00000588907 FRMPD1Q5SYB0 1578 aa25.66■■□□□ 1.7
SCAMP4-211ENST00000588907 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
SCAMP4-211ENST00000588907 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
SCAMP4-211ENST00000588907 ADGBQ8N7X0 1667 aa25.64■■□□□ 1.7
SCAMP4-211ENST00000588907 SPAG9O60271 1321 aaKnown RBP25.64■■□□□ 1.7
SCAMP4-211ENST00000588907 AFAP1Q8N556 730 aa25.64■■□□□ 1.7
SCAMP4-211ENST00000588907 INO80Q9ULG1 1556 aaPredicted RBP25.64■■□□□ 1.69
SCAMP4-211ENST00000588907 ROCK1Q13464 1354 aa25.63■■□□□ 1.69
SCAMP4-211ENST00000588907 ADGRL2O95490 1459 aa25.63■■□□□ 1.69
SCAMP4-211ENST00000588907 COL17A1Q9UMD9 1497 aaPredicted RBP25.63■■□□□ 1.69
SCAMP4-211ENST00000588907 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
SCAMP4-211ENST00000588907 RAPGEF3O95398 923 aa25.62■■□□□ 1.69
SCAMP4-211ENST00000588907 ATP7AQ04656 1500 aa25.62■■□□□ 1.69
SCAMP4-211ENST00000588907 PLXNC1O60486 1568 aa25.61■■□□□ 1.69
SCAMP4-211ENST00000588907 ANKRD30AQ9BXX3 1397 aa25.6■■□□□ 1.69
SCAMP4-211ENST00000588907 ITGAEP38570 1179 aa25.6■■□□□ 1.69
SCAMP4-211ENST00000588907 PTPRKQ15262 1439 aa25.58■■□□□ 1.69
SCAMP4-211ENST00000588907 KIDINS220Q9ULH0 1771 aa25.56■■□□□ 1.68
SCAMP4-211ENST00000588907 MYT1LQ9UL68 1186 aa25.55■■□□□ 1.68
SCAMP4-211ENST00000588907 NCOA1Q15788 1441 aa25.54■■□□□ 1.68
SCAMP4-211ENST00000588907 ARHGEF40Q8TER5 1519 aa25.53■■□□□ 1.68
SCAMP4-211ENST00000588907 CHIC2Q9UKJ5 165 aa25.51■■□□□ 1.67
SCAMP4-211ENST00000588907 HFM1A2PYH4 1435 aa25.51■■□□□ 1.67
SCAMP4-211ENST00000588907 KIF15Q9NS87 1388 aa25.5■■□□□ 1.67
SCAMP4-211ENST00000588907 DUOX2Q9NRD8 1548 aa25.49■■□□□ 1.67
SCAMP4-211ENST00000588907 ABCA6Q8N139 1617 aa25.48■■□□□ 1.67
SCAMP4-211ENST00000588907 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
SCAMP4-211ENST00000588907 GCC2Q8IWJ2 1684 aa25.48■■□□□ 1.67
SCAMP4-211ENST00000588907 REREQ9P2R6 1566 aa25.47■■□□□ 1.67
SCAMP4-211ENST00000588907 ATP10AO60312 1499 aa25.46■■□□□ 1.67
SCAMP4-211ENST00000588907 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
SCAMP4-211ENST00000588907 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
SCAMP4-211ENST00000588907 A2MP01023 1474 aa25.44■■□□□ 1.66
SCAMP4-211ENST00000588907 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
SCAMP4-211ENST00000588907 RRP7BPQ9NSQ0 103 aa25.43■■□□□ 1.66
SCAMP4-211ENST00000588907 NAIPQ13075 1403 aa25.43■■□□□ 1.66
SCAMP4-211ENST00000588907 DHX29Q7Z478 1369 aaKnown RBP25.42■■□□□ 1.66
SCAMP4-211ENST00000588907 ANKRD50Q9ULJ7 1429 aa25.41■■□□□ 1.66
SCAMP4-211ENST00000588907 EIF2AK4Q9P2K8 1649 aaKnown RBP25.41■■□□□ 1.66
SCAMP4-211ENST00000588907 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
SCAMP4-211ENST00000588907 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.66
SCAMP4-211ENST00000588907 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
SCAMP4-211ENST00000588907 AGLP35573 1532 aa25.36■■□□□ 1.65
SCAMP4-211ENST00000588907 HRCP23327 699 aa25.33■■□□□ 1.65
SCAMP4-211ENST00000588907 RAB3GAP2Q9H2M9 1393 aa25.29■■□□□ 1.64
SCAMP4-211ENST00000588907 RNF17Q9BXT8 1623 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-211ENST00000588907 DEPDC5O75140 1603 aa25.26■■□□□ 1.63
SCAMP4-211ENST00000588907 UNC13BO14795 1591 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms