RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 ARHGEF40Q8TER5 1519 aa28.82■■■□□ 2.2
ATP6V0A1-220ENST00000588901 PREX2Q70Z35 1606 aa28.82■■■□□ 2.2
ATP6V0A1-220ENST00000588901 POGZQ7Z3K3 1410 aa28.81■■■□□ 2.2
ATP6V0A1-220ENST00000588901 SCAPERQ9BY12 1400 aa28.81■■■□□ 2.2
ATP6V0A1-220ENST00000588901 CDC42BPBQ9Y5S2 1711 aa28.78■■■□□ 2.2
ATP6V0A1-220ENST00000588901 MAGI2Q86UL8 1455 aa28.74■■■□□ 2.19
ATP6V0A1-220ENST00000588901 CDC42BPAQ5VT25 1732 aa28.74■■■□□ 2.19
ATP6V0A1-220ENST00000588901 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
ATP6V0A1-220ENST00000588901 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
ATP6V0A1-220ENST00000588901 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
ATP6V0A1-220ENST00000588901 EHBP1L1Q8N3D4 1523 aa28.7■■■□□ 2.19
ATP6V0A1-220ENST00000588901 ZNF518AQ6AHZ1 1483 aa28.7■■■□□ 2.18
ATP6V0A1-220ENST00000588901 YEATS2Q9ULM3 1422 aa28.69■■■□□ 2.18
ATP6V0A1-220ENST00000588901 ABCC1P33527 1531 aa28.69■■■□□ 2.18
ATP6V0A1-220ENST00000588901 KDM5CP41229 1560 aa28.68■■■□□ 2.18
ATP6V0A1-220ENST00000588901 GPATCH8Q9UKJ3 1502 aaKnown RBP28.68■■■□□ 2.18
ATP6V0A1-220ENST00000588901 ARHGEF12Q9NZN5 1544 aa28.64■■■□□ 2.18
ATP6V0A1-220ENST00000588901 TIAM1Q13009 1591 aa28.62■■■□□ 2.17
ATP6V0A1-220ENST00000588901 ADAMTSL3P82987 1691 aa28.62■■■□□ 2.17
ATP6V0A1-220ENST00000588901 ITSN2Q9NZM3 1697 aa28.62■■■□□ 2.17
ATP6V0A1-220ENST00000588901 BCORL1Q5H9F3 1711 aa28.61■■■□□ 2.17
ATP6V0A1-220ENST00000588901 SAMD9LQ8IVG5 1584 aa28.61■■■□□ 2.17
ATP6V0A1-220ENST00000588901 CCNB3Q8WWL7 1395 aa28.6■■■□□ 2.17
ATP6V0A1-220ENST00000588901 AFAP1Q8N556 730 aa28.59■■■□□ 2.17
ATP6V0A1-220ENST00000588901 SIGLEC1Q9BZZ2 1709 aa28.59■■■□□ 2.17
ATP6V0A1-220ENST00000588901 HECW2Q9P2P5 1572 aa28.58■■■□□ 2.17
ATP6V0A1-220ENST00000588901 TRAPPC8Q9Y2L5 1435 aa28.58■■■□□ 2.17
ATP6V0A1-220ENST00000588901 ARID4BQ4LE39 1312 aaPredicted RBP28.56■■■□□ 2.16
ATP6V0A1-220ENST00000588901 ATP10AO60312 1499 aa28.55■■■□□ 2.16
ATP6V0A1-220ENST00000588901 MLH3Q9UHC1 1453 aa28.55■■■□□ 2.16
ATP6V0A1-220ENST00000588901 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
ATP6V0A1-220ENST00000588901 SYCP2Q9BX26 1530 aa28.53■■■□□ 2.16
ATP6V0A1-220ENST00000588901 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
ATP6V0A1-220ENST00000588901 CFDP1Q9UEE9 299 aaPredicted RBP28.52■■■□□ 2.16
ATP6V0A1-220ENST00000588901 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
ATP6V0A1-220ENST00000588901 MADDQ8WXG6 1647 aa28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 DIP2CQ9Y2E4 1556 aa28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 ZNF777Q9ULD5 760 aaPredicted RBP28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 NCOA2Q15596 1464 aa28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 PLEKHH2Q8IVE3 1493 aa28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 KIAA1107Q9UPP5 1409 aa28.51■■■□□ 2.15
ATP6V0A1-220ENST00000588901 LRRC9Q6ZRR7 1453 aa28.5■■■□□ 2.15
ATP6V0A1-220ENST00000588901 ABCA6Q8N139 1617 aa28.49■■■□□ 2.15
ATP6V0A1-220ENST00000588901 PTPRMP28827 1452 aa28.48■■■□□ 2.15
ATP6V0A1-220ENST00000588901 REREQ9P2R6 1566 aa28.48■■■□□ 2.15
ATP6V0A1-220ENST00000588901 KIDINS220Q9ULH0 1771 aa28.45■■■□□ 2.14
ATP6V0A1-220ENST00000588901 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.145e-9■■■■□ 19.3
ATP6V0A1-220ENST00000588901 MYT1LQ9UL68 1186 aa28.4■■■□□ 2.14
ATP6V0A1-220ENST00000588901 RIMS1Q86UR5 1692 aaKnown RBP28.39■■■□□ 2.14
ATP6V0A1-220ENST00000588901 ZNF644Q9H582 1327 aaPredicted RBP28.39■■■□□ 2.13
ATP6V0A1-220ENST00000588901 INO80Q9ULG1 1556 aaPredicted RBP28.38■■■□□ 2.13
ATP6V0A1-220ENST00000588901 MBD5Q9P267 1494 aa28.38■■■□□ 2.13
ATP6V0A1-220ENST00000588901 KANK4Q5T7N3 995 aaPredicted RBP28.37■■■□□ 2.13
ATP6V0A1-220ENST00000588901 SPAG9O60271 1321 aaKnown RBP28.37■■■□□ 2.13
ATP6V0A1-220ENST00000588901 AGLP35573 1532 aa28.36■■■□□ 2.13
ATP6V0A1-220ENST00000588901 ATP7AQ04656 1500 aa28.36■■■□□ 2.13
ATP6V0A1-220ENST00000588901 MLECQ14165 292 aa28.34■■■□□ 2.13
ATP6V0A1-220ENST00000588901 FER1L4A9Z1Z3 1794 aa28.34■■■□□ 2.13
ATP6V0A1-220ENST00000588901 CAMSAP2Q08AD1 1489 aa28.34■■■□□ 2.13
ATP6V0A1-220ENST00000588901 PLXNC1O60486 1568 aa28.27■■■□□ 2.12
ATP6V0A1-220ENST00000588901 CCDC141Q6ZP82 1450 aa28.27■■■□□ 2.12
ATP6V0A1-220ENST00000588901 RTEL1-TNFRSF6BF6WH68 1400 aa28.25■■■□□ 2.11
ATP6V0A1-220ENST00000588901 MYOM3Q5VTT5 1437 aa28.25■■■□□ 2.11
ATP6V0A1-220ENST00000588901 ARHGEF5Q12774 1597 aa28.24■■■□□ 2.11
ATP6V0A1-220ENST00000588901 APLP2Q06481 763 aa28.23■■■□□ 2.11
ATP6V0A1-220ENST00000588901 A2MP01023 1474 aa28.22■■■□□ 2.11
ATP6V0A1-220ENST00000588901 MIA2Q96PC5 1412 aa28.22■■■□□ 2.11
ATP6V0A1-220ENST00000588901 ADGBQ8N7X0 1667 aa28.19■■■□□ 2.1
ATP6V0A1-220ENST00000588901 RSPH4AQ5TD94 716 aa28.18■■■□□ 2.1
ATP6V0A1-220ENST00000588901 LMTK3Q96Q04 1460 aa28.17■■■□□ 2.1
ATP6V0A1-220ENST00000588901 PLPPR3Q6T4P5 718 aa28.12■■■□□ 2.09
ATP6V0A1-220ENST00000588901 CNTLNQ9NXG0 1405 aa28.11■■■□□ 2.09
ATP6V0A1-220ENST00000588901 MAST1Q9Y2H9 1570 aa28.1■■■□□ 2.09
ATP6V0A1-220ENST00000588901 DHX29Q7Z478 1369 aaKnown RBP28.09■■■□□ 2.09
ATP6V0A1-220ENST00000588901 C3P01024 1663 aa28.07■■■□□ 2.08
ATP6V0A1-220ENST00000588901 CEBPAP49715 358 aaPredicted RBP28.07■■■□□ 2.08
ATP6V0A1-220ENST00000588901 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
ATP6V0A1-220ENST00000588901 FGD6Q6ZV73 1430 aa28.06■■■□□ 2.08
ATP6V0A1-220ENST00000588901 MROH2AA6NES4 1674 aa28.06■■■□□ 2.08
ATP6V0A1-220ENST00000588901 TSPY4P0CV99 314 aa28.05■■■□□ 2.08
ATP6V0A1-220ENST00000588901 TSPY10P0CW01 314 aa28.05■■■□□ 2.08
ATP6V0A1-220ENST00000588901 ESF1Q9H501 851 aaKnown RBP28.05■■■□□ 2.08
ATP6V0A1-220ENST00000588901 TCOF1Q13428 1488 aaKnown RBP28.03■■■□□ 2.08
ATP6V0A1-220ENST00000588901 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
ATP6V0A1-220ENST00000588901 SHANK2Q9UPX8 1470 aa27.99■■■□□ 2.07
ATP6V0A1-220ENST00000588901 CROCC2H7BZ55 1655 aa27.99■■■□□ 2.07
ATP6V0A1-220ENST00000588901 CLTCQ00610 1675 aaKnown RBP27.98■■■□□ 2.07
ATP6V0A1-220ENST00000588901 GGT6Q6P531 493 aa27.98■■■□□ 2.07
ATP6V0A1-220ENST00000588901 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
ATP6V0A1-220ENST00000588901 ABCC5O15440 1437 aa27.97■■■□□ 2.07
ATP6V0A1-220ENST00000588901 DNMT1P26358 1616 aaKnown RBP27.96■■■□□ 2.07
ATP6V0A1-220ENST00000588901 ZMYM3Q14202 1370 aa27.95■■■□□ 2.06
ATP6V0A1-220ENST00000588901 UHRF1BP1Q6BDS2 1440 aa27.94■■■□□ 2.06
ATP6V0A1-220ENST00000588901 HSPA2P54652 639 aa27.94■■■□□ 2.06
ATP6V0A1-220ENST00000588901 DAPK1P53355 1430 aa27.93■■■□□ 2.06
ATP6V0A1-220ENST00000588901 NPATQ14207 1427 aa27.93■■■□□ 2.06
ATP6V0A1-220ENST00000588901 FAM135AQ9P2D6 1515 aa27.93■■■□□ 2.06
ATP6V0A1-220ENST00000588901 KIF3BO15066 747 aa27.93■■■□□ 2.06
ATP6V0A1-220ENST00000588901 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
ATP6V0A1-220ENST00000588901 EIF2AK4Q9P2K8 1649 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms