RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
CLPTM1-209ENST00000588855 ITSN2Q9NZM3 1697 aa29.62■■■□□ 2.33
CLPTM1-209ENST00000588855 NEO1Q92859 1461 aa29.59■■■□□ 2.33
CLPTM1-209ENST00000588855 KDM6BO15054 1643 aa29.57■■■□□ 2.32
CLPTM1-209ENST00000588855 AKNAQ7Z591 1439 aa29.53■■■□□ 2.32
CLPTM1-209ENST00000588855 EFCAB2Q5VUJ9 269 aa29.52■■■□□ 2.32
CLPTM1-209ENST00000588855 PPARGC1BQ86YN6 1023 aaKnown RBP29.52■■■□□ 2.32
CLPTM1-209ENST00000588855 COL17A1Q9UMD9 1497 aaPredicted RBP29.51■■■□□ 2.31
CLPTM1-209ENST00000588855 PHLDB1Q86UU1 1377 aa29.51■■■□□ 2.31
CLPTM1-209ENST00000588855 SAMD9LQ8IVG5 1584 aa29.5■■■□□ 2.31
CLPTM1-209ENST00000588855 CFDP1Q9UEE9 299 aaPredicted RBP29.48■■■□□ 2.31
CLPTM1-209ENST00000588855 ADGRL1O94910 1474 aa29.48■■■□□ 2.31
CLPTM1-209ENST00000588855 MYOM3Q5VTT5 1437 aa29.47■■■□□ 2.31
CLPTM1-209ENST00000588855 ABCC1P33527 1531 aa29.46■■■□□ 2.31
CLPTM1-209ENST00000588855 ZNF777Q9ULD5 760 aaPredicted RBP29.45■■■□□ 2.3
CLPTM1-209ENST00000588855 RICTORQ6R327 1708 aa29.42■■■□□ 2.3
CLPTM1-209ENST00000588855 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
CLPTM1-209ENST00000588855 SCAPERQ9BY12 1400 aa29.41■■■□□ 2.3
CLPTM1-209ENST00000588855 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.3
CLPTM1-209ENST00000588855 ARHGEF12Q9NZN5 1544 aa29.39■■■□□ 2.3
CLPTM1-209ENST00000588855 DENND4BO75064 1496 aaPredicted RBP29.39■■■□□ 2.3
CLPTM1-209ENST00000588855 CAMSAP2Q08AD1 1489 aa29.39■■■□□ 2.29
CLPTM1-209ENST00000588855 MIA2Q96PC5 1412 aa29.38■■■□□ 2.29
CLPTM1-209ENST00000588855 ZNF644Q9H582 1327 aaPredicted RBP29.38■■■□□ 2.29
CLPTM1-209ENST00000588855 POGZQ7Z3K3 1410 aa29.36■■■□□ 2.29
CLPTM1-209ENST00000588855 PLEKHH2Q8IVE3 1493 aa29.36■■■□□ 2.29
CLPTM1-209ENST00000588855 FGD6Q6ZV73 1430 aa29.35■■■□□ 2.29
CLPTM1-209ENST00000588855 PTPN23Q9H3S7 1636 aa29.35■■■□□ 2.29
CLPTM1-209ENST00000588855 RAPGEF3O95398 923 aa29.35■■■□□ 2.29
CLPTM1-209ENST00000588855 KIAA1107Q9UPP5 1409 aa29.32■■■□□ 2.28
CLPTM1-209ENST00000588855 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
CLPTM1-209ENST00000588855 ZNF518AQ6AHZ1 1483 aa29.3■■■□□ 2.28
CLPTM1-209ENST00000588855 HNRNPMP52272 730 aaKnown RBP eCLIP29.29■■■□□ 2.283e-10■■■■■ 34.9
CLPTM1-209ENST00000588855 ZMYM4Q5VZL5 1548 aa29.28■■■□□ 2.28
CLPTM1-209ENST00000588855 KDM5CP41229 1560 aa29.28■■■□□ 2.28
CLPTM1-209ENST00000588855 MBD5Q9P267 1494 aa29.28■■■□□ 2.28
CLPTM1-209ENST00000588855 TCOF1Q13428 1488 aaKnown RBP29.27■■■□□ 2.28
CLPTM1-209ENST00000588855 AFAP1Q8N556 730 aa29.25■■■□□ 2.27
CLPTM1-209ENST00000588855 ARHGEF5Q12774 1597 aa29.24■■■□□ 2.27
CLPTM1-209ENST00000588855 HECW2Q9P2P5 1572 aa29.21■■■□□ 2.27
CLPTM1-209ENST00000588855 CCDC141Q6ZP82 1450 aa29.2■■■□□ 2.27
CLPTM1-209ENST00000588855 ARHGEF40Q8TER5 1519 aa29.17■■■□□ 2.26
CLPTM1-209ENST00000588855 ZFYVE16Q7Z3T8 1539 aa29.16■■■□□ 2.26
CLPTM1-209ENST00000588855 INO80Q9ULG1 1556 aaPredicted RBP29.16■■■□□ 2.26
CLPTM1-209ENST00000588855 KIDINS220Q9ULH0 1771 aa29.16■■■□□ 2.26
CLPTM1-209ENST00000588855 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
CLPTM1-209ENST00000588855 MAGI2Q86UL8 1455 aa29.15■■■□□ 2.26
CLPTM1-209ENST00000588855 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
CLPTM1-209ENST00000588855 MLH3Q9UHC1 1453 aa29.15■■■□□ 2.26
CLPTM1-209ENST00000588855 FAM50AQ14320 339 aaKnown RBP29.15■■■□□ 2.26
CLPTM1-209ENST00000588855 YEATS2Q9ULM3 1422 aa29.14■■■□□ 2.26
CLPTM1-209ENST00000588855 RRBP1Q9P2E9 1410 aaKnown RBP29.14■■■□□ 2.25
CLPTM1-209ENST00000588855 ATP7AQ04656 1500 aa29.12■■■□□ 2.25
CLPTM1-209ENST00000588855 SPAG9O60271 1321 aaKnown RBP29.12■■■□□ 2.25
CLPTM1-209ENST00000588855 ABCA6Q8N139 1617 aa29.11■■■□□ 2.25
CLPTM1-209ENST00000588855 RSPH4AQ5TD94 716 aa29.1■■■□□ 2.25
CLPTM1-209ENST00000588855 ABCC5O15440 1437 aa29.09■■■□□ 2.25
CLPTM1-209ENST00000588855 DAPK1P53355 1430 aa29.09■■■□□ 2.25
CLPTM1-209ENST00000588855 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
CLPTM1-209ENST00000588855 MYT1LQ9UL68 1186 aa29.09■■■□□ 2.25
CLPTM1-209ENST00000588855 MAST1Q9Y2H9 1570 aa29.08■■■□□ 2.25
CLPTM1-209ENST00000588855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.05■■■□□ 2.24
CLPTM1-209ENST00000588855 C9orf84Q5VXU9 1444 aa29.05■■■□□ 2.24
CLPTM1-209ENST00000588855 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
CLPTM1-209ENST00000588855 RTEL1-TNFRSF6BF6WH68 1400 aa29.03■■■□□ 2.24
CLPTM1-209ENST00000588855 TSPY4P0CV99 314 aa29.03■■■□□ 2.24
CLPTM1-209ENST00000588855 TSPY10P0CW01 314 aa29.03■■■□□ 2.24
CLPTM1-209ENST00000588855 ADGBQ8N7X0 1667 aa29.01■■■□□ 2.23
CLPTM1-209ENST00000588855 SIGLEC1Q9BZZ2 1709 aa29.01■■■□□ 2.23
CLPTM1-209ENST00000588855 ATP10AO60312 1499 aa28.99■■■□□ 2.23
CLPTM1-209ENST00000588855 PLXNC1O60486 1568 aa28.97■■■□□ 2.23
CLPTM1-209ENST00000588855 REREQ9P2R6 1566 aa28.96■■■□□ 2.23
CLPTM1-209ENST00000588855 PTPRKQ15262 1439 aa28.96■■■□□ 2.23
CLPTM1-209ENST00000588855 ITGAEP38570 1179 aa28.93■■■□□ 2.22
CLPTM1-209ENST00000588855 CHIC2Q9UKJ5 165 aa28.93■■■□□ 2.22
CLPTM1-209ENST00000588855 ADGRL2O95490 1459 aa28.91■■■□□ 2.22
CLPTM1-209ENST00000588855 A2MP01023 1474 aa28.91■■■□□ 2.22
CLPTM1-209ENST00000588855 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
CLPTM1-209ENST00000588855 NCOA1Q15788 1441 aa28.85■■■□□ 2.21
CLPTM1-209ENST00000588855 AGLP35573 1532 aa28.85■■■□□ 2.21
CLPTM1-209ENST00000588855 KIF15Q9NS87 1388 aa28.85■■■□□ 2.21
CLPTM1-209ENST00000588855 ARID4BQ4LE39 1312 aaPredicted RBP28.84■■■□□ 2.21
CLPTM1-209ENST00000588855 DHX29Q7Z478 1369 aaKnown RBP28.83■■■□□ 2.21
CLPTM1-209ENST00000588855 RRP7BPQ9NSQ0 103 aa28.83■■■□□ 2.21
CLPTM1-209ENST00000588855 DUOX2Q9NRD8 1548 aa28.83■■■□□ 2.21
CLPTM1-209ENST00000588855 BCORL1Q5H9F3 1711 aa28.82■■■□□ 2.2
CLPTM1-209ENST00000588855 ROCK1Q13464 1354 aa28.8■■■□□ 2.2
CLPTM1-209ENST00000588855 EIF2AK4Q9P2K8 1649 aaKnown RBP28.77■■■□□ 2.2
CLPTM1-209ENST00000588855 ERBINQ96RT1 1412 aa28.74■■■□□ 2.19
CLPTM1-209ENST00000588855 ADAMTSL3P82987 1691 aa28.73■■■□□ 2.19
CLPTM1-209ENST00000588855 MLECQ14165 292 aa28.73■■■□□ 2.19
CLPTM1-209ENST00000588855 GCC2Q8IWJ2 1684 aa28.71■■■□□ 2.19
CLPTM1-209ENST00000588855 MADDQ8WXG6 1647 aa28.7■■■□□ 2.18
CLPTM1-209ENST00000588855 RNF17Q9BXT8 1623 aaKnown RBP28.69■■■□□ 2.18
CLPTM1-209ENST00000588855 FER1L4A9Z1Z3 1794 aa28.69■■■□□ 2.18
CLPTM1-209ENST00000588855 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
CLPTM1-209ENST00000588855 KIF3BO15066 747 aa28.69■■■□□ 2.18
CLPTM1-209ENST00000588855 KDM4FA0A1W2PPD8 638 aa28.65■■■□□ 2.18
CLPTM1-209ENST00000588855 NAIPQ13075 1403 aa28.65■■■□□ 2.18
CLPTM1-209ENST00000588855 MROH1Q8NDA8 1641 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms