RNA–Protein interactions for RNA: ENST00000588826.2

RAD23A-205, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 5

Gene RAD23A, Length 832 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-205ENST00000588826 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
RAD23A-205ENST00000588826 CLIP1P30622 1438 aa21.58■■□□□ 1.05
RAD23A-205ENST00000588826 SCAPERQ9BY12 1400 aa21.58■■□□□ 1.05
RAD23A-205ENST00000588826 ILDR1Q86SU0 546 aaPredicted RBP21.58■■□□□ 1.05
RAD23A-205ENST00000588826 SIGLEC1Q9BZZ2 1709 aa21.58■■□□□ 1.04
RAD23A-205ENST00000588826 TROQ12816 1431 aaPredicted RBP21.57■■□□□ 1.04
RAD23A-205ENST00000588826 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
RAD23A-205ENST00000588826 PCF11O94913 1555 aaKnown RBP21.55■■□□□ 1.04
RAD23A-205ENST00000588826 FER1L4A9Z1Z3 1794 aa21.55■■□□□ 1.04
RAD23A-205ENST00000588826 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
RAD23A-205ENST00000588826 EFCAB2Q5VUJ9 269 aa21.54■■□□□ 1.04
RAD23A-205ENST00000588826 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.03
RAD23A-205ENST00000588826 CDC42BPBQ9Y5S2 1711 aa21.51■■□□□ 1.03
RAD23A-205ENST00000588826 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
RAD23A-205ENST00000588826 CASKIN1Q8WXD9 1431 aa21.49■■□□□ 1.03
RAD23A-205ENST00000588826 PREX2Q70Z35 1606 aa21.49■■□□□ 1.03
RAD23A-205ENST00000588826 LMTK3Q96Q04 1460 aa21.49■■□□□ 1.03
RAD23A-205ENST00000588826 C9orf84Q5VXU9 1444 aa21.47■■□□□ 1.03
RAD23A-205ENST00000588826 ATP10AO60312 1499 aa21.47■■□□□ 1.03
RAD23A-205ENST00000588826 KDM5CP41229 1560 aa21.47■■□□□ 1.03
RAD23A-205ENST00000588826 MLECQ14165 292 aa21.45■■□□□ 1.02
RAD23A-205ENST00000588826 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.02
RAD23A-205ENST00000588826 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
RAD23A-205ENST00000588826 PLPPR3Q6T4P5 718 aa21.42■■□□□ 1.02
RAD23A-205ENST00000588826 ITSN2Q9NZM3 1697 aa21.42■■□□□ 1.02
RAD23A-205ENST00000588826 ARHGEF12Q9NZN5 1544 aa21.42■■□□□ 1.02
RAD23A-205ENST00000588826 ABCC1P33527 1531 aa21.4■■□□□ 1.02
RAD23A-205ENST00000588826 DIP2CQ9Y2E4 1556 aa21.4■■□□□ 1.02
RAD23A-205ENST00000588826 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.01
RAD23A-205ENST00000588826 ABCA6Q8N139 1617 aa21.38■■□□□ 1.01
RAD23A-205ENST00000588826 REREQ9P2R6 1566 aa21.37■■□□□ 1.01
RAD23A-205ENST00000588826 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
RAD23A-205ENST00000588826 PREX1Q8TCU6 1659 aa21.36■■□□□ 1.01
RAD23A-205ENST00000588826 MLH3Q9UHC1 1453 aa21.35■■□□□ 1.01
RAD23A-205ENST00000588826 TRAPPC8Q9Y2L5 1435 aa21.31■■□□□ 1
RAD23A-205ENST00000588826 HSPA2P54652 639 aa21.31■■□□□ 1
RAD23A-205ENST00000588826 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
RAD23A-205ENST00000588826 SAMD9LQ8IVG5 1584 aa21.28■■□□□ 1
RAD23A-205ENST00000588826 FBXO41Q8TF61 875 aa21.28■■□□□ 1
RAD23A-205ENST00000588826 SETD1BQ9UPS6 1966 aaKnown RBP21.27■■□□□ 1
RAD23A-205ENST00000588826 AGLP35573 1532 aa21.27■■□□□ 1
RAD23A-205ENST00000588826 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
RAD23A-205ENST00000588826 GPATCH8Q9UKJ3 1502 aaKnown RBP21.25■□□□□ 0.99
RAD23A-205ENST00000588826 C3P01024 1663 aa21.25■□□□□ 0.99
RAD23A-205ENST00000588826 ZNF777Q9ULD5 760 aaPredicted RBP21.24■□□□□ 0.99
RAD23A-205ENST00000588826 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
RAD23A-205ENST00000588826 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
RAD23A-205ENST00000588826 MTUS2Q5JR59 1369 aa21.21■□□□□ 0.99
RAD23A-205ENST00000588826 UHRF1BP1Q6BDS2 1440 aa21.21■□□□□ 0.99
RAD23A-205ENST00000588826 PLEKHH2Q8IVE3 1493 aa21.2■□□□□ 0.98
RAD23A-205ENST00000588826 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
RAD23A-205ENST00000588826 SUPT6HQ7KZ85 1726 aaKnown RBP21.19■□□□□ 0.98
RAD23A-205ENST00000588826 EHBP1L1Q8N3D4 1523 aa21.19■□□□□ 0.98
RAD23A-205ENST00000588826 ATP7AQ04656 1500 aa21.18■□□□□ 0.98
RAD23A-205ENST00000588826 INO80Q9ULG1 1556 aaPredicted RBP21.18■□□□□ 0.98
RAD23A-205ENST00000588826 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
RAD23A-205ENST00000588826 STRCQ7RTU9 1775 aa21.16■□□□□ 0.98
RAD23A-205ENST00000588826 MROH2AA6NES4 1674 aa21.16■□□□□ 0.98
RAD23A-205ENST00000588826 CNTLNQ9NXG0 1405 aa21.16■□□□□ 0.98
RAD23A-205ENST00000588826 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
RAD23A-205ENST00000588826 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
RAD23A-205ENST00000588826 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
RAD23A-205ENST00000588826 CEP162Q5TB80 1403 aa21.14■□□□□ 0.98
RAD23A-205ENST00000588826 HNRNPMP52272 730 aaKnown RBP eCLIP21.14■□□□□ 0.97
RAD23A-205ENST00000588826 PLXNC1O60486 1568 aa21.12■□□□□ 0.97
RAD23A-205ENST00000588826 ADGBQ8N7X0 1667 aa21.12■□□□□ 0.97
RAD23A-205ENST00000588826 CLTCQ00610 1675 aaKnown RBP21.09■□□□□ 0.97
RAD23A-205ENST00000588826 DMRT2Q9Y5R5 561 aa21.09■□□□□ 0.97
RAD23A-205ENST00000588826 A2MP01023 1474 aa21.08■□□□□ 0.97
RAD23A-205ENST00000588826 CERKQ8TCT0 537 aa21.07■□□□□ 0.96
RAD23A-205ENST00000588826 NPATQ14207 1427 aa21.04■□□□□ 0.96
RAD23A-205ENST00000588826 ZNF644Q9H582 1327 aaPredicted RBP21.02■□□□□ 0.95
RAD23A-205ENST00000588826 MBD5Q9P267 1494 aa21.01■□□□□ 0.95
RAD23A-205ENST00000588826 ZMYM3Q14202 1370 aa21.01■□□□□ 0.95
RAD23A-205ENST00000588826 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
RAD23A-205ENST00000588826 ZNF142P52746 1687 aaPredicted RBP21■□□□□ 0.95
RAD23A-205ENST00000588826 PTPRTO14522 1441 aa21■□□□□ 0.95
RAD23A-205ENST00000588826 NCOA2Q15596 1464 aa21■□□□□ 0.95
RAD23A-205ENST00000588826 RTEL1-TNFRSF6BF6WH68 1400 aa20.98■□□□□ 0.95
RAD23A-205ENST00000588826 NCOA1Q15788 1441 aa20.98■□□□□ 0.95
RAD23A-205ENST00000588826 CAMSAP2Q08AD1 1489 aa20.98■□□□□ 0.95
RAD23A-205ENST00000588826 CAMSAP1Q5T5Y3 1602 aa20.97■□□□□ 0.95
RAD23A-205ENST00000588826 CCDC141Q6ZP82 1450 aa20.97■□□□□ 0.95
RAD23A-205ENST00000588826 GGT6Q6P531 493 aa20.97■□□□□ 0.95
RAD23A-205ENST00000588826 CEP170BQ9Y4F5 1589 aaPredicted RBP20.94■□□□□ 0.94
RAD23A-205ENST00000588826 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
RAD23A-205ENST00000588826 PPP6R1Q9UPN7 881 aa20.93■□□□□ 0.94
RAD23A-205ENST00000588826 PTPRKQ15262 1439 aa20.93■□□□□ 0.94
RAD23A-205ENST00000588826 ARHGEF5Q12774 1597 aa20.92■□□□□ 0.94
RAD23A-205ENST00000588826 DHX29Q7Z478 1369 aaKnown RBP20.91■□□□□ 0.94
RAD23A-205ENST00000588826 FAM135AQ9P2D6 1515 aa20.89■□□□□ 0.94
RAD23A-205ENST00000588826 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.94
RAD23A-205ENST00000588826 RSPH4AQ5TD94 716 aa20.89■□□□□ 0.93
RAD23A-205ENST00000588826 LTBP4Q8N2S1 1624 aa20.88■□□□□ 0.93
RAD23A-205ENST00000588826 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
RAD23A-205ENST00000588826 PLA2R1Q13018 1463 aa20.88■□□□□ 0.93
RAD23A-205ENST00000588826 IQSEC2Q5JU85 1478 aa20.84■□□□□ 0.93
RAD23A-205ENST00000588826 KIF3BO15066 747 aa20.84■□□□□ 0.93
RAD23A-205ENST00000588826 MAP3K1Q13233 1512 aa20.83■□□□□ 0.93
RAD23A-205ENST00000588826 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms