RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
CACTIN-206ENST00000588749 SCAPERQ9BY12 1400 aa23.15■■□□□ 1.3
CACTIN-206ENST00000588749 POGZQ7Z3K3 1410 aa23.13■■□□□ 1.29
CACTIN-206ENST00000588749 MTUS2Q5JR59 1369 aa23.13■■□□□ 1.29
CACTIN-206ENST00000588749 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
CACTIN-206ENST00000588749 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
CACTIN-206ENST00000588749 ARHGEF40Q8TER5 1519 aa23.12■■□□□ 1.29
CACTIN-206ENST00000588749 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
CACTIN-206ENST00000588749 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
CACTIN-206ENST00000588749 ZFYVE16Q7Z3T8 1539 aa23.07■■□□□ 1.28
CACTIN-206ENST00000588749 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
CACTIN-206ENST00000588749 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
CACTIN-206ENST00000588749 YEATS2Q9ULM3 1422 aa23.04■■□□□ 1.28
CACTIN-206ENST00000588749 ZNF518AQ6AHZ1 1483 aa23.04■■□□□ 1.28
CACTIN-206ENST00000588749 ABCC1P33527 1531 aa23.03■■□□□ 1.28
CACTIN-206ENST00000588749 TIAM1Q13009 1591 aa23.03■■□□□ 1.28
CACTIN-206ENST00000588749 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
CACTIN-206ENST00000588749 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
CACTIN-206ENST00000588749 KDM5CP41229 1560 aa23■■□□□ 1.27
CACTIN-206ENST00000588749 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
CACTIN-206ENST00000588749 ARHGEF12Q9NZN5 1544 aa22.99■■□□□ 1.27
CACTIN-206ENST00000588749 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
CACTIN-206ENST00000588749 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
CACTIN-206ENST00000588749 SAMD9LQ8IVG5 1584 aa22.98■■□□□ 1.27
CACTIN-206ENST00000588749 TRAPPC8Q9Y2L5 1435 aa22.97■■□□□ 1.27
CACTIN-206ENST00000588749 BCORL1Q5H9F3 1711 aa22.96■■□□□ 1.27
CACTIN-206ENST00000588749 CFDP1Q9UEE9 299 aaPredicted RBP22.96■■□□□ 1.27
CACTIN-206ENST00000588749 HECW2Q9P2P5 1572 aa22.96■■□□□ 1.27
CACTIN-206ENST00000588749 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
CACTIN-206ENST00000588749 ADAMTSL3P82987 1691 aa22.95■■□□□ 1.26
CACTIN-206ENST00000588749 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
CACTIN-206ENST00000588749 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
CACTIN-206ENST00000588749 MYT1LQ9UL68 1186 aa22.93■■□□□ 1.26
CACTIN-206ENST00000588749 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
CACTIN-206ENST00000588749 ATP10AO60312 1499 aa22.92■■□□□ 1.26
CACTIN-206ENST00000588749 LRRC9Q6ZRR7 1453 aa22.92■■□□□ 1.26
CACTIN-206ENST00000588749 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
CACTIN-206ENST00000588749 MAP3K1Q13233 1512 aa22.9■■□□□ 1.26
CACTIN-206ENST00000588749 PLEKHH2Q8IVE3 1493 aa22.9■■□□□ 1.26
CACTIN-206ENST00000588749 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
CACTIN-206ENST00000588749 MADDQ8WXG6 1647 aa22.9■■□□□ 1.26
CACTIN-206ENST00000588749 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.26
CACTIN-206ENST00000588749 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
CACTIN-206ENST00000588749 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.25
CACTIN-206ENST00000588749 KIAA1107Q9UPP5 1409 aa22.87■■□□□ 1.25
CACTIN-206ENST00000588749 KIDINS220Q9ULH0 1771 aa22.86■■□□□ 1.25
CACTIN-206ENST00000588749 PTPRMP28827 1452 aa22.85■■□□□ 1.25
CACTIN-206ENST00000588749 ZNF644Q9H582 1327 aaPredicted RBP22.84■■□□□ 1.25
CACTIN-206ENST00000588749 KANK4Q5T7N3 995 aaPredicted RBP22.84■■□□□ 1.25
CACTIN-206ENST00000588749 RIMS1Q86UR5 1692 aaKnown RBP22.84■■□□□ 1.25
CACTIN-206ENST00000588749 MLECQ14165 292 aa22.83■■□□□ 1.25
CACTIN-206ENST00000588749 REREQ9P2R6 1566 aa22.82■■□□□ 1.24
CACTIN-206ENST00000588749 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
CACTIN-206ENST00000588749 APLP2Q06481 763 aa22.81■■□□□ 1.24
CACTIN-206ENST00000588749 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
CACTIN-206ENST00000588749 FER1L4A9Z1Z3 1794 aa22.79■■□□□ 1.24
CACTIN-206ENST00000588749 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
CACTIN-206ENST00000588749 INO80Q9ULG1 1556 aaPredicted RBP22.79■■□□□ 1.24
CACTIN-206ENST00000588749 MBD5Q9P267 1494 aa22.78■■□□□ 1.24
CACTIN-206ENST00000588749 AGLP35573 1532 aa22.74■■□□□ 1.23
CACTIN-206ENST00000588749 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
CACTIN-206ENST00000588749 CCDC141Q6ZP82 1450 aa22.72■■□□□ 1.23
CACTIN-206ENST00000588749 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
CACTIN-206ENST00000588749 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
CACTIN-206ENST00000588749 A2MP01023 1474 aa22.67■■□□□ 1.22
CACTIN-206ENST00000588749 MIA2Q96PC5 1412 aa22.67■■□□□ 1.22
CACTIN-206ENST00000588749 ADGBQ8N7X0 1667 aa22.67■■□□□ 1.22
CACTIN-206ENST00000588749 PLXNC1O60486 1568 aa22.67■■□□□ 1.22
CACTIN-206ENST00000588749 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
CACTIN-206ENST00000588749 RSPH4AQ5TD94 716 aa22.65■■□□□ 1.22
CACTIN-206ENST00000588749 ESF1Q9H501 851 aaKnown RBP22.6■■□□□ 1.21
CACTIN-206ENST00000588749 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
CACTIN-206ENST00000588749 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
CACTIN-206ENST00000588749 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
CACTIN-206ENST00000588749 CEBPAP49715 358 aaPredicted RBP22.58■■□□□ 1.21
CACTIN-206ENST00000588749 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
CACTIN-206ENST00000588749 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
CACTIN-206ENST00000588749 CNTLNQ9NXG0 1405 aa22.56■■□□□ 1.2
CACTIN-206ENST00000588749 C3P01024 1663 aa22.55■■□□□ 1.2
CACTIN-206ENST00000588749 MAST1Q9Y2H9 1570 aa22.55■■□□□ 1.2
CACTIN-206ENST00000588749 DHX29Q7Z478 1369 aaKnown RBP22.55■■□□□ 1.2
CACTIN-206ENST00000588749 GGT6Q6P531 493 aa22.53■■□□□ 1.2
CACTIN-206ENST00000588749 TCOF1Q13428 1488 aaKnown RBP22.52■■□□□ 1.2
CACTIN-206ENST00000588749 MROH2AA6NES4 1674 aa22.52■■□□□ 1.2
CACTIN-206ENST00000588749 CROCC2H7BZ55 1655 aa22.51■■□□□ 1.19
CACTIN-206ENST00000588749 CLTCQ00610 1675 aaKnown RBP22.51■■□□□ 1.19
CACTIN-206ENST00000588749 PREX1Q8TCU6 1659 aa22.51■■□□□ 1.19
CACTIN-206ENST00000588749 ABCC5O15440 1437 aa22.48■■□□□ 1.19
CACTIN-206ENST00000588749 KIF3BO15066 747 aa22.48■■□□□ 1.19
CACTIN-206ENST00000588749 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
CACTIN-206ENST00000588749 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
CACTIN-206ENST00000588749 SETD1BQ9UPS6 1966 aaKnown RBP22.47■■□□□ 1.19
CACTIN-206ENST00000588749 DAPK1P53355 1430 aa22.47■■□□□ 1.19
CACTIN-206ENST00000588749 HSPA2P54652 639 aa22.46■■□□□ 1.19
CACTIN-206ENST00000588749 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
CACTIN-206ENST00000588749 UHRF1BP1Q6BDS2 1440 aa22.43■■□□□ 1.18
CACTIN-206ENST00000588749 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
CACTIN-206ENST00000588749 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
CACTIN-206ENST00000588749 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
CACTIN-206ENST00000588749 KIF15Q9NS87 1388 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms