RNA–Protein interactions for RNA: ENST00000588703.5

HDAC5-209, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-209ENST00000588703 SCAPERQ9BY12 1400 aa29.13■■■□□ 2.25
HDAC5-209ENST00000588703 ARHGAP5Q13017 1502 aa29.13■■■□□ 2.25
HDAC5-209ENST00000588703 PREX2Q70Z35 1606 aa29.12■■■□□ 2.25
HDAC5-209ENST00000588703 EFCAB2Q5VUJ9 269 aa29.11■■■□□ 2.25
HDAC5-209ENST00000588703 CDC42BPAQ5VT25 1732 aa29.09■■■□□ 2.25
HDAC5-209ENST00000588703 ADAMTSL3P82987 1691 aa29.09■■■□□ 2.25
HDAC5-209ENST00000588703 ZFYVE16Q7Z3T8 1539 aa29.08■■■□□ 2.25
HDAC5-209ENST00000588703 BCORL1Q5H9F3 1711 aa29.07■■■□□ 2.24
HDAC5-209ENST00000588703 YEATS2Q9ULM3 1422 aa29.06■■■□□ 2.24
HDAC5-209ENST00000588703 SIGLEC1Q9BZZ2 1709 aa29.06■■■□□ 2.24
HDAC5-209ENST00000588703 MAGI2Q86UL8 1455 aa29.05■■■□□ 2.24
HDAC5-209ENST00000588703 LOC105371045A0A1W2PR82 267 aa29.03■■■□□ 2.24
HDAC5-209ENST00000588703 KDM5CP41229 1560 aa29■■■□□ 2.23
HDAC5-209ENST00000588703 ABCC1P33527 1531 aa28.99■■■□□ 2.23
HDAC5-209ENST00000588703 ZNF518AQ6AHZ1 1483 aa28.98■■■□□ 2.23
HDAC5-209ENST00000588703 ITSN2Q9NZM3 1697 aa28.98■■■□□ 2.23
HDAC5-209ENST00000588703 MADDQ8WXG6 1647 aa28.97■■■□□ 2.23
HDAC5-209ENST00000588703 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.23
HDAC5-209ENST00000588703 ARHGEF12Q9NZN5 1544 aa28.95■■■□□ 2.23
HDAC5-209ENST00000588703 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
HDAC5-209ENST00000588703 MTUS2Q5JR59 1369 aa28.92■■■□□ 2.22
HDAC5-209ENST00000588703 HECW2Q9P2P5 1572 aa28.92■■■□□ 2.22
HDAC5-209ENST00000588703 PTPRMP28827 1452 aa28.91■■■□□ 2.22
HDAC5-209ENST00000588703 EHBP1L1Q8N3D4 1523 aa28.91■■■□□ 2.22
HDAC5-209ENST00000588703 AFAP1Q8N556 730 aa28.91■■■□□ 2.22
HDAC5-209ENST00000588703 SAMD9LQ8IVG5 1584 aa28.91■■■□□ 2.22
HDAC5-209ENST00000588703 TRAPPC8Q9Y2L5 1435 aa28.89■■■□□ 2.22
HDAC5-209ENST00000588703 ATP10AO60312 1499 aa28.89■■■□□ 2.22
HDAC5-209ENST00000588703 RIMS1Q86UR5 1692 aaKnown RBP28.88■■■□□ 2.21
HDAC5-209ENST00000588703 C9orf84Q5VXU9 1444 aa28.87■■■□□ 2.21
HDAC5-209ENST00000588703 DIP2CQ9Y2E4 1556 aa28.87■■■□□ 2.21
HDAC5-209ENST00000588703 TIAM1Q13009 1591 aa28.86■■■□□ 2.21
HDAC5-209ENST00000588703 ABCA6Q8N139 1617 aa28.86■■■□□ 2.21
HDAC5-209ENST00000588703 VPS8Q8N3P4 1428 aa28.85■■■□□ 2.21
HDAC5-209ENST00000588703 MLH3Q9UHC1 1453 aa28.85■■■□□ 2.21
HDAC5-209ENST00000588703 SYCP2Q9BX26 1530 aa28.84■■■□□ 2.21
HDAC5-209ENST00000588703 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
HDAC5-209ENST00000588703 KIDINS220Q9ULH0 1771 aa28.81■■■□□ 2.2
HDAC5-209ENST00000588703 FER1L4A9Z1Z3 1794 aa28.8■■■□□ 2.2
HDAC5-209ENST00000588703 REREQ9P2R6 1566 aa28.79■■■□□ 2.2
HDAC5-209ENST00000588703 ZNF777Q9ULD5 760 aaPredicted RBP28.79■■■□□ 2.2
HDAC5-209ENST00000588703 CFDP1Q9UEE9 299 aaPredicted RBP28.76■■■□□ 2.19
HDAC5-209ENST00000588703 SUPT6HQ7KZ85 1726 aaKnown RBP28.76■■■□□ 2.19
HDAC5-209ENST00000588703 PLEKHH2Q8IVE3 1493 aa28.74■■■□□ 2.19
HDAC5-209ENST00000588703 MLECQ14165 292 aa28.74■■■□□ 2.19
HDAC5-209ENST00000588703 MYT1LQ9UL68 1186 aa28.74■■■□□ 2.19
HDAC5-209ENST00000588703 KIAA1107Q9UPP5 1409 aa28.74■■■□□ 2.19
HDAC5-209ENST00000588703 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
HDAC5-209ENST00000588703 HNRNPMP52272 730 aaKnown RBP eCLIP28.71■■■□□ 2.195e-16■■■■■ 28.8
HDAC5-209ENST00000588703 INO80Q9ULG1 1556 aaPredicted RBP28.69■■■□□ 2.18
HDAC5-209ENST00000588703 AGLP35573 1532 aa28.68■■■□□ 2.18
HDAC5-209ENST00000588703 LRRC9Q6ZRR7 1453 aa28.67■■■□□ 2.18
HDAC5-209ENST00000588703 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
HDAC5-209ENST00000588703 ATP7AQ04656 1500 aa28.66■■■□□ 2.18
HDAC5-209ENST00000588703 MAP3K1Q13233 1512 aa28.66■■■□□ 2.18
HDAC5-209ENST00000588703 MBD5Q9P267 1494 aa28.64■■■□□ 2.17
HDAC5-209ENST00000588703 SPAG9O60271 1321 aaKnown RBP28.64■■■□□ 2.17
HDAC5-209ENST00000588703 LMTK3Q96Q04 1460 aa28.61■■■□□ 2.17
HDAC5-209ENST00000588703 CAMSAP2Q08AD1 1489 aa28.59■■■□□ 2.17
HDAC5-209ENST00000588703 PLPPR3Q6T4P5 718 aa28.58■■■□□ 2.17
HDAC5-209ENST00000588703 KANK4Q5T7N3 995 aaPredicted RBP28.57■■■□□ 2.16
HDAC5-209ENST00000588703 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
HDAC5-209ENST00000588703 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
HDAC5-209ENST00000588703 A2MP01023 1474 aa28.52■■■□□ 2.16
HDAC5-209ENST00000588703 C3P01024 1663 aa28.51■■■□□ 2.16
HDAC5-209ENST00000588703 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
HDAC5-209ENST00000588703 CEBPAP49715 358 aaPredicted RBP28.48■■■□□ 2.15
HDAC5-209ENST00000588703 RTEL1-TNFRSF6BF6WH68 1400 aa28.48■■■□□ 2.15
HDAC5-209ENST00000588703 ARHGEF5Q12774 1597 aa28.48■■■□□ 2.15
HDAC5-209ENST00000588703 PREX1Q8TCU6 1659 aa28.48■■■□□ 2.15
HDAC5-209ENST00000588703 SETD1BQ9UPS6 1966 aaKnown RBP28.43■■■□□ 2.14
HDAC5-209ENST00000588703 MROH2AA6NES4 1674 aa28.43■■■□□ 2.14
HDAC5-209ENST00000588703 MYOM3Q5VTT5 1437 aa28.43■■■□□ 2.14
HDAC5-209ENST00000588703 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
HDAC5-209ENST00000588703 HSPA2P54652 639 aa28.4■■■□□ 2.14
HDAC5-209ENST00000588703 MIA2Q96PC5 1412 aa28.39■■■□□ 2.14
HDAC5-209ENST00000588703 CLTCQ00610 1675 aaKnown RBP28.38■■■□□ 2.13
HDAC5-209ENST00000588703 RSPH4AQ5TD94 716 aa28.38■■■□□ 2.13
HDAC5-209ENST00000588703 ESF1Q9H501 851 aaKnown RBP28.38■■■□□ 2.13
HDAC5-209ENST00000588703 DHX29Q7Z478 1369 aaKnown RBP28.36■■■□□ 2.13
HDAC5-209ENST00000588703 APLP2Q06481 763 aa28.35■■■□□ 2.13
HDAC5-209ENST00000588703 MAST1Q9Y2H9 1570 aa28.34■■■□□ 2.13
HDAC5-209ENST00000588703 UHRF1BP1Q6BDS2 1440 aa28.31■■■□□ 2.12
HDAC5-209ENST00000588703 GGT6Q6P531 493 aa28.3■■■□□ 2.12
HDAC5-209ENST00000588703 PTPN23Q9H3S7 1636 aa28.29■■■□□ 2.12
HDAC5-209ENST00000588703 ZMYM3Q14202 1370 aa28.28■■■□□ 2.12
HDAC5-209ENST00000588703 TSPY4P0CV99 314 aa28.28■■■□□ 2.12
HDAC5-209ENST00000588703 TSPY10P0CW01 314 aa28.28■■■□□ 2.12
HDAC5-209ENST00000588703 CROCC2H7BZ55 1655 aa28.26■■■□□ 2.12
HDAC5-209ENST00000588703 NPATQ14207 1427 aa28.26■■■□□ 2.11
HDAC5-209ENST00000588703 STRCQ7RTU9 1775 aa28.24■■■□□ 2.11
HDAC5-209ENST00000588703 PPP6R1Q9UPN7 881 aa28.23■■■□□ 2.11
HDAC5-209ENST00000588703 FGD6Q6ZV73 1430 aa28.23■■■□□ 2.11
HDAC5-209ENST00000588703 KIF3BO15066 747 aa28.22■■■□□ 2.11
HDAC5-209ENST00000588703 TCOF1Q13428 1488 aaKnown RBP28.21■■■□□ 2.11
HDAC5-209ENST00000588703 PTPRKQ15262 1439 aa28.2■■■□□ 2.11
HDAC5-209ENST00000588703 FAM135AQ9P2D6 1515 aa28.19■■■□□ 2.1
HDAC5-209ENST00000588703 ABCC5O15440 1437 aa28.18■■■□□ 2.1
HDAC5-209ENST00000588703 KDM5DQ9BY66 1539 aa28.18■■■□□ 2.1
HDAC5-209ENST00000588703 DNMT1P26358 1616 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms