RNA–Protein interactions for RNA: ENST00000588622.1

PDCD5-206, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-206ENST00000588622 TSHZ2Q9NRE2 1034 aa9.12□□□□□ -0.95
PDCD5-206ENST00000588622 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
PDCD5-206ENST00000588622 NCKAP5LQ9HCH0 1330 aa9.09□□□□□ -0.95
PDCD5-206ENST00000588622 KIF3CO14782 793 aa9.09□□□□□ -0.95
PDCD5-206ENST00000588622 SCUBE2Q9NQ36 999 aa9.09□□□□□ -0.95
PDCD5-206ENST00000588622 G3V3G9 751 aa9.08□□□□□ -0.96
PDCD5-206ENST00000588622 MAMSTRQ6ZN01 415 aa9.08□□□□□ -0.96
PDCD5-206ENST00000588622 FAM163AQ96GL9 167 aaPredicted RBP9.08□□□□□ -0.96
PDCD5-206ENST00000588622 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
PDCD5-206ENST00000588622 SLAIN1Q8ND83 568 aa9.07□□□□□ -0.96
PDCD5-206ENST00000588622 C2orf72A6NCS6 295 aa9.06□□□□□ -0.96
PDCD5-206ENST00000588622 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
PDCD5-206ENST00000588622 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
PDCD5-206ENST00000588622 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
PDCD5-206ENST00000588622 DSG2Q14126 1118 aa9□□□□□ -0.97
PDCD5-206ENST00000588622 HOXB3P14651 431 aaPredicted RBP8.98□□□□□ -0.97
PDCD5-206ENST00000588622 MFSD10Q14728 455 aa8.98□□□□□ -0.97
PDCD5-206ENST00000588622 TMC2Q8TDI7 906 aa8.98□□□□□ -0.97
PDCD5-206ENST00000588622 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
PDCD5-206ENST00000588622 FOXK1P85037 733 aa8.96□□□□□ -0.98
PDCD5-206ENST00000588622 KDM2AQ9Y2K7 1162 aa8.96□□□□□ -0.98
PDCD5-206ENST00000588622 PDE4AP27815 886 aa8.95□□□□□ -0.98
PDCD5-206ENST00000588622 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
PDCD5-206ENST00000588622 PPP1R15BQ5SWA1 713 aa8.94□□□□□ -0.98
PDCD5-206ENST00000588622 PLPP6Q8IY26 295 aa8.94□□□□□ -0.98
PDCD5-206ENST00000588622 DDX27Q96GQ7 796 aaKnown RBP8.92□□□□□ -0.98
PDCD5-206ENST00000588622 EMILIN3Q9NT22 766 aa8.89□□□□□ -0.99
PDCD5-206ENST00000588622 ST18O60284 1047 aa8.87□□□□□ -0.99
PDCD5-206ENST00000588622 CAMK2BQ13554 666 aa8.87□□□□□ -0.99
PDCD5-206ENST00000588622 KHSRPQ92945 711 aaKnown RBP eCLIP8.87□□□□□ -0.996e-8■□□□□ 8.3
PDCD5-206ENST00000588622 SLC34A2O95436 690 aa8.85□□□□□ -0.99
PDCD5-206ENST00000588622 GPR153Q6NV75 609 aa8.85□□□□□ -0.99
PDCD5-206ENST00000588622 DOK7Q18PE1 504 aa8.84□□□□□ -0.99
PDCD5-206ENST00000588622 OXER1Q8TDS5 423 aa8.84□□□□□ -0.99
PDCD5-206ENST00000588622 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.99
PDCD5-206ENST00000588622 SNPHO15079 494 aa8.83□□□□□ -1
PDCD5-206ENST00000588622 ARSIQ5FYB1 569 aa8.83□□□□□ -1
PDCD5-206ENST00000588622 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
PDCD5-206ENST00000588622 PCDHGA4Q9Y5G9 962 aa8.83□□□□□ -1
PDCD5-206ENST00000588622 KDM4FA0A1W2PPD8 638 aa8.82□□□□□ -1
PDCD5-206ENST00000588622 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
PDCD5-206ENST00000588622 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
PDCD5-206ENST00000588622 E2F4Q16254 413 aa8.81□□□□□ -1
PDCD5-206ENST00000588622 MMRN1Q13201 1228 aa8.8□□□□□ -1
PDCD5-206ENST00000588622 WDR70Q9NW82 654 aa8.8□□□□□ -1
PDCD5-206ENST00000588622 SLC24A1O60721 1099 aa8.79□□□□□ -1
PDCD5-206ENST00000588622 HOXB1P14653 301 aaPredicted RBP8.79□□□□□ -1
PDCD5-206ENST00000588622 ZNF710Q8N1W2 664 aa8.79□□□□□ -1
PDCD5-206ENST00000588622 MARVELD3Q96A59 401 aa8.79□□□□□ -1
PDCD5-206ENST00000588622 DPYSL4O14531 572 aa8.78□□□□□ -1
PDCD5-206ENST00000588622 NUDT7P0C024 238 aa8.78□□□□□ -1
PDCD5-206ENST00000588622 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
PDCD5-206ENST00000588622 POTEB3A0JP26 581 aa8.76□□□□□ -1.01
PDCD5-206ENST00000588622 POTEBQ6S5H4 581 aa8.76□□□□□ -1.01
PDCD5-206ENST00000588622 RIMBP2O15034 1052 aa8.75□□□□□ -1.01
PDCD5-206ENST00000588622 SPNS2Q8IVW8 549 aa8.74□□□□□ -1.01
PDCD5-206ENST00000588622 ARIH1Q9Y4X5 557 aaPredicted RBP8.74□□□□□ -1.01
PDCD5-206ENST00000588622 EVI5O60447 810 aa8.72□□□□□ -1.01
PDCD5-206ENST00000588622 LHX6Q9UPM6 363 aa8.72□□□□□ -1.01
PDCD5-206ENST00000588622 EMP3P54852 163 aa8.71□□□□□ -1.02
PDCD5-206ENST00000588622 MAP3K9P80192 1104 aa8.71□□□□□ -1.02
PDCD5-206ENST00000588622 PDIA6Q15084 440 aa8.7□□□□□ -1.02
PDCD5-206ENST00000588622 ANO8Q9HCE9 1232 aaPredicted RBP8.7□□□□□ -1.02
PDCD5-206ENST00000588622 TBC1D12O60347 775 aa8.69□□□□□ -1.02
PDCD5-206ENST00000588622 ARHGEF1Q92888 912 aaKnown RBP8.69□□□□□ -1.02
PDCD5-206ENST00000588622 FAM205CA6NFA0 338 aa8.68□□□□□ -1.02
PDCD5-206ENST00000588622 ZNF316A6NFI3 1004 aaPredicted RBP8.68□□□□□ -1.02
PDCD5-206ENST00000588622 HS3ST6Q96QI5 342 aa8.67□□□□□ -1.02
PDCD5-206ENST00000588622 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
PDCD5-206ENST00000588622 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
PDCD5-206ENST00000588622 PRIM1P49642 420 aaKnown RBP8.65□□□□□ -1.02
PDCD5-206ENST00000588622 ERBB3P21860 1342 aa8.64□□□□□ -1.03
PDCD5-206ENST00000588622 SEMA3EO15041 775 aa8.64□□□□□ -1.03
PDCD5-206ENST00000588622 MLLT3P42568 568 aaPredicted RBP8.64□□□□□ -1.03
PDCD5-206ENST00000588622 SPDYE16A6NNV3 312 aaPredicted RBP8.63□□□□□ -1.03
PDCD5-206ENST00000588622 FOSBP53539 338 aa8.63□□□□□ -1.03
PDCD5-206ENST00000588622 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
PDCD5-206ENST00000588622 DDX12PQ92771 950 aa8.63□□□□□ -1.03
PDCD5-206ENST00000588622 PTGER2P43116 358 aa8.62□□□□□ -1.03
PDCD5-206ENST00000588622 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
PDCD5-206ENST00000588622 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
PDCD5-206ENST00000588622 ZNF454Q8N9F8 522 aa8.6□□□□□ -1.03
PDCD5-206ENST00000588622 ADAM33Q9BZ11 813 aa8.59□□□□□ -1.03
PDCD5-206ENST00000588622 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
PDCD5-206ENST00000588622 KRTAP3-3Q9BYR6 98 aa8.58□□□□□ -1.04
PDCD5-206ENST00000588622 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
PDCD5-206ENST00000588622 GRXCR2A6NFK2 248 aa8.57□□□□□ -1.04
PDCD5-206ENST00000588622 PHF14O94880 888 aa8.57□□□□□ -1.04
PDCD5-206ENST00000588622 OSBPP22059 807 aa8.57□□□□□ -1.04
PDCD5-206ENST00000588622 ZNF687Q8N1G0 1237 aa8.57□□□□□ -1.04
PDCD5-206ENST00000588622 NBR1Q14596 966 aa8.56□□□□□ -1.04
PDCD5-206ENST00000588622 AXIN2Q9Y2T1 843 aa8.56□□□□□ -1.04
PDCD5-206ENST00000588622 PPP4R3BQ5MIZ7 849 aa8.55□□□□□ -1.04
PDCD5-206ENST00000588622 PSEN2P49810 448 aa8.54□□□□□ -1.04
PDCD5-206ENST00000588622 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
PDCD5-206ENST00000588622 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
PDCD5-206ENST00000588622 PSDA5PKW4 1024 aaPredicted RBP8.53□□□□□ -1.04
PDCD5-206ENST00000588622 TSR1Q2NL82 804 aaKnown RBP8.53□□□□□ -1.04
PDCD5-206ENST00000588622 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
PDCD5-206ENST00000588622 EN1Q05925 392 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms