RNA–Protein interactions for RNA: ENST00000588564.1

RUNDC3A-204, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-204ENST00000588564 COL17A1Q9UMD9 1497 aaPredicted RBP21.61■■□□□ 1.05
RUNDC3A-204ENST00000588564 ARHGAP5Q13017 1502 aa21.6■■□□□ 1.05
RUNDC3A-204ENST00000588564 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
RUNDC3A-204ENST00000588564 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
RUNDC3A-204ENST00000588564 AKNAQ7Z591 1439 aa21.59■■□□□ 1.05
RUNDC3A-204ENST00000588564 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
RUNDC3A-204ENST00000588564 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.05
RUNDC3A-204ENST00000588564 PHLDB1Q86UU1 1377 aa21.58■■□□□ 1.04
RUNDC3A-204ENST00000588564 KDM6BO15054 1643 aa21.58■■□□□ 1.04
RUNDC3A-204ENST00000588564 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
RUNDC3A-204ENST00000588564 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
RUNDC3A-204ENST00000588564 ZNF777Q9ULD5 760 aaPredicted RBP21.52■■□□□ 1.04
RUNDC3A-204ENST00000588564 ADGRL1O94910 1474 aa21.52■■□□□ 1.03
RUNDC3A-204ENST00000588564 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
RUNDC3A-204ENST00000588564 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
RUNDC3A-204ENST00000588564 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
RUNDC3A-204ENST00000588564 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
RUNDC3A-204ENST00000588564 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
RUNDC3A-204ENST00000588564 ABCC1P33527 1531 aa21.49■■□□□ 1.03
RUNDC3A-204ENST00000588564 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
RUNDC3A-204ENST00000588564 RAPGEF3O95398 923 aa21.48■■□□□ 1.03
RUNDC3A-204ENST00000588564 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
RUNDC3A-204ENST00000588564 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
RUNDC3A-204ENST00000588564 HNRNPMP52272 730 aaKnown RBP eCLIP21.44■■□□□ 1.02
RUNDC3A-204ENST00000588564 CAMSAP2Q08AD1 1489 aa21.44■■□□□ 1.02
RUNDC3A-204ENST00000588564 SYCP2Q9BX26 1530 aa21.44■■□□□ 1.02
RUNDC3A-204ENST00000588564 POGZQ7Z3K3 1410 aa21.43■■□□□ 1.02
RUNDC3A-204ENST00000588564 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
RUNDC3A-204ENST00000588564 TRAPPC8Q9Y2L5 1435 aa21.43■■□□□ 1.02
RUNDC3A-204ENST00000588564 FGD6Q6ZV73 1430 aa21.42■■□□□ 1.02
RUNDC3A-204ENST00000588564 PLEKHH2Q8IVE3 1493 aa21.42■■□□□ 1.02
RUNDC3A-204ENST00000588564 PTPN23Q9H3S7 1636 aa21.41■■□□□ 1.02
RUNDC3A-204ENST00000588564 MBD5Q9P267 1494 aa21.41■■□□□ 1.02
RUNDC3A-204ENST00000588564 AFAP1Q8N556 730 aa21.41■■□□□ 1.02
RUNDC3A-204ENST00000588564 KDM5CP41229 1560 aa21.38■■□□□ 1.01
RUNDC3A-204ENST00000588564 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
RUNDC3A-204ENST00000588564 ZNF518AQ6AHZ1 1483 aa21.38■■□□□ 1.01
RUNDC3A-204ENST00000588564 ZMYM4Q5VZL5 1548 aa21.36■■□□□ 1.01
RUNDC3A-204ENST00000588564 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
RUNDC3A-204ENST00000588564 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
RUNDC3A-204ENST00000588564 MLH3Q9UHC1 1453 aa21.31■■□□□ 1
RUNDC3A-204ENST00000588564 KIDINS220Q9ULH0 1771 aa21.31■■□□□ 1
RUNDC3A-204ENST00000588564 CCDC141Q6ZP82 1450 aa21.3■■□□□ 1
RUNDC3A-204ENST00000588564 MAGI2Q86UL8 1455 aa21.3■■□□□ 1
RUNDC3A-204ENST00000588564 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
RUNDC3A-204ENST00000588564 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
RUNDC3A-204ENST00000588564 FAM50AQ14320 339 aaKnown RBP21.28■■□□□ 1
RUNDC3A-204ENST00000588564 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
RUNDC3A-204ENST00000588564 RRBP1Q9P2E9 1410 aaKnown RBP21.28■■□□□ 1
RUNDC3A-204ENST00000588564 SPAG9O60271 1321 aaKnown RBP21.28■■□□□ 1
RUNDC3A-204ENST00000588564 DNMT1P26358 1616 aaKnown RBP21.27■■□□□ 1
RUNDC3A-204ENST00000588564 ABCC5O15440 1437 aa21.27■■□□□ 1
RUNDC3A-204ENST00000588564 INO80Q9ULG1 1556 aaPredicted RBP21.27■□□□□ 0.99
RUNDC3A-204ENST00000588564 ARHGEF40Q8TER5 1519 aa21.25■□□□□ 0.99
RUNDC3A-204ENST00000588564 CROCC2H7BZ55 1655 aa21.25■□□□□ 0.99
RUNDC3A-204ENST00000588564 ABCA6Q8N139 1617 aa21.25■□□□□ 0.99
RUNDC3A-204ENST00000588564 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
RUNDC3A-204ENST00000588564 DAPK1P53355 1430 aa21.24■□□□□ 0.99
RUNDC3A-204ENST00000588564 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
RUNDC3A-204ENST00000588564 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
RUNDC3A-204ENST00000588564 DIP2CQ9Y2E4 1556 aa21.23■□□□□ 0.99
RUNDC3A-204ENST00000588564 RTEL1-TNFRSF6BF6WH68 1400 aa21.23■□□□□ 0.99
RUNDC3A-204ENST00000588564 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
RUNDC3A-204ENST00000588564 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
RUNDC3A-204ENST00000588564 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
RUNDC3A-204ENST00000588564 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
RUNDC3A-204ENST00000588564 ATP10AO60312 1499 aa21.2■□□□□ 0.98
RUNDC3A-204ENST00000588564 PTPRKQ15262 1439 aa21.19■□□□□ 0.98
RUNDC3A-204ENST00000588564 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
RUNDC3A-204ENST00000588564 SHANK2Q9UPX8 1470 aa21.18■□□□□ 0.98
RUNDC3A-204ENST00000588564 ADGBQ8N7X0 1667 aa21.18■□□□□ 0.98
RUNDC3A-204ENST00000588564 REREQ9P2R6 1566 aa21.15■□□□□ 0.98
RUNDC3A-204ENST00000588564 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
RUNDC3A-204ENST00000588564 PLXNC1O60486 1568 aa21.13■□□□□ 0.97
RUNDC3A-204ENST00000588564 ITGAEP38570 1179 aa21.12■□□□□ 0.97
RUNDC3A-204ENST00000588564 A2MP01023 1474 aa21.12■□□□□ 0.97
RUNDC3A-204ENST00000588564 ADGRL2O95490 1459 aa21.11■□□□□ 0.97
RUNDC3A-204ENST00000588564 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
RUNDC3A-204ENST00000588564 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
RUNDC3A-204ENST00000588564 RRP7BPQ9NSQ0 103 aa21.09■□□□□ 0.97
RUNDC3A-204ENST00000588564 AGLP35573 1532 aa21.08■□□□□ 0.96
RUNDC3A-204ENST00000588564 ANKRD30AQ9BXX3 1397 aa21.07■□□□□ 0.96
RUNDC3A-204ENST00000588564 ARID4BQ4LE39 1312 aaPredicted RBP21.06■□□□□ 0.96
RUNDC3A-204ENST00000588564 BCORL1Q5H9F3 1711 aa21.06■□□□□ 0.96
RUNDC3A-204ENST00000588564 KIF15Q9NS87 1388 aa21.05■□□□□ 0.96
RUNDC3A-204ENST00000588564 DUOX2Q9NRD8 1548 aa21.04■□□□□ 0.96
RUNDC3A-204ENST00000588564 ROCK1Q13464 1354 aa21.04■□□□□ 0.96
RUNDC3A-204ENST00000588564 KDM4FA0A1W2PPD8 638 aa21.01■□□□□ 0.95
RUNDC3A-204ENST00000588564 ADAMTSL3P82987 1691 aa21.01■□□□□ 0.95
RUNDC3A-204ENST00000588564 MLECQ14165 292 aa21■□□□□ 0.95
RUNDC3A-204ENST00000588564 EIF2AK4Q9P2K8 1649 aaKnown RBP20.99■□□□□ 0.95
RUNDC3A-204ENST00000588564 KIF3BO15066 747 aa20.98■□□□□ 0.95
RUNDC3A-204ENST00000588564 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
RUNDC3A-204ENST00000588564 MADDQ8WXG6 1647 aa20.94■□□□□ 0.94
RUNDC3A-204ENST00000588564 GGT6Q6P531 493 aa20.94■□□□□ 0.94
RUNDC3A-204ENST00000588564 ANKRD50Q9ULJ7 1429 aa20.94■□□□□ 0.94
RUNDC3A-204ENST00000588564 RNF17Q9BXT8 1623 aaKnown RBP20.93■□□□□ 0.94
RUNDC3A-204ENST00000588564 FER1L4A9Z1Z3 1794 aa20.93■□□□□ 0.94
RUNDC3A-204ENST00000588564 NAIPQ13075 1403 aa20.93■□□□□ 0.94
RUNDC3A-204ENST00000588564 MROH1Q8NDA8 1641 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms