RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SUPT6HQ7KZ85 1726 aaKnown RBP31.89■■■□□ 2.69
DDX39A-207ENST00000588542 FRMPD1Q5SYB0 1578 aa31.87■■■□□ 2.69
DDX39A-207ENST00000588542 GPATCH8Q9UKJ3 1502 aaKnown RBP31.87■■■□□ 2.69
DDX39A-207ENST00000588542 EFCAB2Q5VUJ9 269 aa31.87■■■□□ 2.69
DDX39A-207ENST00000588542 RICTORQ6R327 1708 aa31.86■■■□□ 2.69
DDX39A-207ENST00000588542 KANK4Q5T7N3 995 aaPredicted RBP31.84■■■□□ 2.69
DDX39A-207ENST00000588542 ADGRL1O94910 1474 aa31.83■■■□□ 2.69
DDX39A-207ENST00000588542 DENND4BO75064 1496 aaPredicted RBP31.81■■■□□ 2.68
DDX39A-207ENST00000588542 NCOA2Q15596 1464 aa31.81■■■□□ 2.68
DDX39A-207ENST00000588542 RAPGEF3O95398 923 aa31.81■■■□□ 2.68
DDX39A-207ENST00000588542 CCNB3Q8WWL7 1395 aa31.81■■■□□ 2.68
DDX39A-207ENST00000588542 ITSN2Q9NZM3 1697 aa31.8■■■□□ 2.68
DDX39A-207ENST00000588542 SCAPERQ9BY12 1400 aa31.78■■■□□ 2.68
DDX39A-207ENST00000588542 APLP2Q06481 763 aa31.76■■■□□ 2.67
DDX39A-207ENST00000588542 SAMD9LQ8IVG5 1584 aa31.75■■■□□ 2.67
DDX39A-207ENST00000588542 ABCC1P33527 1531 aa31.75■■■□□ 2.67
DDX39A-207ENST00000588542 POGZQ7Z3K3 1410 aa31.72■■■□□ 2.67
DDX39A-207ENST00000588542 ARHGEF12Q9NZN5 1544 aa31.7■■■□□ 2.67
DDX39A-207ENST00000588542 ZMYM4Q5VZL5 1548 aa31.7■■■□□ 2.66
DDX39A-207ENST00000588542 CFDP1Q9UEE9 299 aaPredicted RBP31.69■■■□□ 2.66
DDX39A-207ENST00000588542 ZNF777Q9ULD5 760 aaPredicted RBP31.66■■■□□ 2.66
DDX39A-207ENST00000588542 ZNF518AQ6AHZ1 1483 aa31.64■■■□□ 2.66
DDX39A-207ENST00000588542 KDM5CP41229 1560 aa31.64■■■□□ 2.65
DDX39A-207ENST00000588542 SYCP2Q9BX26 1530 aa31.63■■■□□ 2.65
DDX39A-207ENST00000588542 TRAPPC8Q9Y2L5 1435 aa31.61■■■□□ 2.65
DDX39A-207ENST00000588542 ARHGEF40Q8TER5 1519 aa31.59■■■□□ 2.65
DDX39A-207ENST00000588542 PLEKHH2Q8IVE3 1493 aa31.59■■■□□ 2.65
DDX39A-207ENST00000588542 ZNF644Q9H582 1327 aaPredicted RBP31.59■■■□□ 2.65
DDX39A-207ENST00000588542 AFAP1Q8N556 730 aa31.59■■■□□ 2.65
DDX39A-207ENST00000588542 KIAA1107Q9UPP5 1409 aa31.58■■■□□ 2.65
DDX39A-207ENST00000588542 MAGI2Q86UL8 1455 aa31.58■■■□□ 2.65
DDX39A-207ENST00000588542 ZFYVE16Q7Z3T8 1539 aa31.56■■■□□ 2.64
DDX39A-207ENST00000588542 MYOM3Q5VTT5 1437 aa31.56■■■□□ 2.64
DDX39A-207ENST00000588542 HNRNPMP52272 730 aaKnown RBP eCLIP31.55■■■□□ 2.645e-8■■■■□ 23.8
DDX39A-207ENST00000588542 YEATS2Q9ULM3 1422 aa31.55■■■□□ 2.64
DDX39A-207ENST00000588542 CAMSAP2Q08AD1 1489 aa31.54■■■□□ 2.64
DDX39A-207ENST00000588542 HECW2Q9P2P5 1572 aa31.54■■■□□ 2.64
DDX39A-207ENST00000588542 MBD5Q9P267 1494 aa31.51■■■□□ 2.63
DDX39A-207ENST00000588542 MLH3Q9UHC1 1453 aa31.5■■■□□ 2.63
DDX39A-207ENST00000588542 MIA2Q96PC5 1412 aa31.49■■■□□ 2.63
DDX39A-207ENST00000588542 KIDINS220Q9ULH0 1771 aa31.49■■■□□ 2.63
DDX39A-207ENST00000588542 SIGLEC1Q9BZZ2 1709 aa31.47■■■□□ 2.63
DDX39A-207ENST00000588542 ABCA6Q8N139 1617 aa31.45■■■□□ 2.62
DDX39A-207ENST00000588542 DIP2CQ9Y2E4 1556 aa31.44■■■□□ 2.62
DDX39A-207ENST00000588542 ARHGEF5Q12774 1597 aa31.42■■■□□ 2.62
DDX39A-207ENST00000588542 INO80Q9ULG1 1556 aaPredicted RBP31.42■■■□□ 2.62
DDX39A-207ENST00000588542 PTPN23Q9H3S7 1636 aa31.42■■■□□ 2.62
DDX39A-207ENST00000588542 ATP10AO60312 1499 aa31.41■■■□□ 2.62
DDX39A-207ENST00000588542 KDM4FA0A1W2PPD8 638 aa31.4■■■□□ 2.62
DDX39A-207ENST00000588542 FGD6Q6ZV73 1430 aa31.4■■■□□ 2.62
DDX39A-207ENST00000588542 ATP7AQ04656 1500 aa31.39■■■□□ 2.61
DDX39A-207ENST00000588542 SPAG9O60271 1321 aaKnown RBP31.38■■■□□ 2.61
DDX39A-207ENST00000588542 CCDC141Q6ZP82 1450 aa31.38■■■□□ 2.61
DDX39A-207ENST00000588542 MYT1LQ9UL68 1186 aa31.37■■■□□ 2.61
DDX39A-207ENST00000588542 C9orf84Q5VXU9 1444 aa31.36■■■□□ 2.61
DDX39A-207ENST00000588542 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
DDX39A-207ENST00000588542 REREQ9P2R6 1566 aa31.34■■■□□ 2.61
DDX39A-207ENST00000588542 TCOF1Q13428 1488 aaKnown RBP31.34■■■□□ 2.61
DDX39A-207ENST00000588542 BCORL1Q5H9F3 1711 aa31.34■■■□□ 2.61
DDX39A-207ENST00000588542 RSPH4AQ5TD94 716 aa31.32■■■□□ 2.6
DDX39A-207ENST00000588542 RTEL1-TNFRSF6BF6WH68 1400 aa31.3■■■□□ 2.6
DDX39A-207ENST00000588542 ADAMTSL3P82987 1691 aa31.29■■■□□ 2.6
DDX39A-207ENST00000588542 ARID4BQ4LE39 1312 aaPredicted RBP31.28■■■□□ 2.6
DDX39A-207ENST00000588542 CROCC2H7BZ55 1655 aa31.26■■■□□ 2.6
DDX39A-207ENST00000588542 ADGBQ8N7X0 1667 aa31.26■■■□□ 2.6
DDX39A-207ENST00000588542 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.59
DDX39A-207ENST00000588542 DNMT1P26358 1616 aaKnown RBP31.24■■■□□ 2.59
DDX39A-207ENST00000588542 AGLP35573 1532 aa31.22■■■□□ 2.59
DDX39A-207ENST00000588542 PLXNC1O60486 1568 aa31.22■■■□□ 2.59
DDX39A-207ENST00000588542 ABCC5O15440 1437 aa31.21■■■□□ 2.59
DDX39A-207ENST00000588542 TSPY4P0CV99 314 aa31.2■■■□□ 2.59
DDX39A-207ENST00000588542 TSPY10P0CW01 314 aa31.2■■■□□ 2.59
DDX39A-207ENST00000588542 MADDQ8WXG6 1647 aa31.19■■■□□ 2.58
DDX39A-207ENST00000588542 A2MP01023 1474 aa31.19■■■□□ 2.58
DDX39A-207ENST00000588542 DAPK1P53355 1430 aa31.17■■■□□ 2.58
DDX39A-207ENST00000588542 SHANK2Q9UPX8 1470 aa31.15■■■□□ 2.58
DDX39A-207ENST00000588542 FER1L4A9Z1Z3 1794 aa31.13■■■□□ 2.57
DDX39A-207ENST00000588542 MLECQ14165 292 aa31.12■■■□□ 2.57
DDX39A-207ENST00000588542 FAM50AQ14320 339 aaKnown RBP31.12■■■□□ 2.57
DDX39A-207ENST00000588542 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
DDX39A-207ENST00000588542 RIMS1Q86UR5 1692 aaKnown RBP31.12■■■□□ 2.57
DDX39A-207ENST00000588542 DHX29Q7Z478 1369 aaKnown RBP31.1■■■□□ 2.57
DDX39A-207ENST00000588542 PTPRMP28827 1452 aa31.04■■■□□ 2.56
DDX39A-207ENST00000588542 RRBP1Q9P2E9 1410 aaKnown RBP31.04■■■□□ 2.56
DDX39A-207ENST00000588542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.04■■■□□ 2.564e-9■□□□□ 10.2
DDX39A-207ENST00000588542 PTPRKQ15262 1439 aa30.99■■■□□ 2.55
DDX39A-207ENST00000588542 CHIC2Q9UKJ5 165 aa30.99■■■□□ 2.55
DDX39A-207ENST00000588542 ADGRL2O95490 1459 aa30.99■■■□□ 2.55
DDX39A-207ENST00000588542 DUOX2Q9NRD8 1548 aa30.98■■■□□ 2.55
DDX39A-207ENST00000588542 KIF15Q9NS87 1388 aa30.97■■■□□ 2.55
DDX39A-207ENST00000588542 EIF2AK4Q9P2K8 1649 aaKnown RBP30.97■■■□□ 2.55
DDX39A-207ENST00000588542 NCOA1Q15788 1441 aa30.96■■■□□ 2.55
DDX39A-207ENST00000588542 ANKRD30AQ9BXX3 1397 aa30.94■■■□□ 2.54
DDX39A-207ENST00000588542 RRP7BPQ9NSQ0 103 aa30.94■■■□□ 2.54
DDX39A-207ENST00000588542 KIF3BO15066 747 aa30.93■■■□□ 2.54
DDX39A-207ENST00000588542 RNF17Q9BXT8 1623 aaKnown RBP30.92■■■□□ 2.54
DDX39A-207ENST00000588542 CLTCQ00610 1675 aaKnown RBP30.91■■■□□ 2.54
DDX39A-207ENST00000588542 GGT6Q6P531 493 aa30.91■■■□□ 2.54
DDX39A-207ENST00000588542 MROH2AA6NES4 1674 aa30.9■■■□□ 2.54
DDX39A-207ENST00000588542 C3P01024 1663 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms