RNA–Protein interactions for RNA: ENST00000588494.5

NEDD4L-222, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-222ENST00000588494 VSIG10Q8N0Z9 540 aa7.33□□□□□ -1.24
NEDD4L-222ENST00000588494 RYDENQ9NUL5 291 aaKnown RBP7.33□□□□□ -1.24
NEDD4L-222ENST00000588494 EFCAB3Q8N7B9 438 aa7.32□□□□□ -1.24
NEDD4L-222ENST00000588494 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
NEDD4L-222ENST00000588494 RNF166Q96A37 237 aaPredicted RBP7.29□□□□□ -1.24
NEDD4L-222ENST00000588494 OCEL1Q9H607 264 aa7.29□□□□□ -1.24
NEDD4L-222ENST00000588494 KDM2AQ9Y2K7 1162 aa7.29□□□□□ -1.24
NEDD4L-222ENST00000588494 MFRPQ9BY79 579 aa7.28□□□□□ -1.24
NEDD4L-222ENST00000588494 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
NEDD4L-222ENST00000588494 NLRP6P59044 892 aa7.26□□□□□ -1.25
NEDD4L-222ENST00000588494 MKRN3Q13064 507 aaKnown RBP7.26□□□□□ -1.25
NEDD4L-222ENST00000588494 SOX12O15370 315 aa7.25□□□□□ -1.25
NEDD4L-222ENST00000588494 PPP1R37O75864 691 aa7.21□□□□□ -1.26
NEDD4L-222ENST00000588494 C3orf67Q6ZVT6 689 aa7.21□□□□□ -1.26
NEDD4L-222ENST00000588494 FBXO22Q8NEZ5 403 aa7.2□□□□□ -1.26
NEDD4L-222ENST00000588494 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.19□□□□□ -1.262e-7■□□□□ 9.3
NEDD4L-222ENST00000588494 MYT1LQ9UL68 1186 aa7.19□□□□□ -1.26
NEDD4L-222ENST00000588494 CADPS2Q86UW7 1296 aa7.17□□□□□ -1.26
NEDD4L-222ENST00000588494 MS4A4AQ96JQ5 239 aa7.17□□□□□ -1.26
NEDD4L-222ENST00000588494 BCANQ96GW7 911 aa7.16□□□□□ -1.26
NEDD4L-222ENST00000588494 WDR70Q9NW82 654 aa7.16□□□□□ -1.26
NEDD4L-222ENST00000588494 PDCD7Q8N8D1 485 aaKnown RBP7.13□□□□□ -1.27
NEDD4L-222ENST00000588494 ERBB3P21860 1342 aa7.11□□□□□ -1.27
NEDD4L-222ENST00000588494 NBR1Q14596 966 aa7.11□□□□□ -1.27
NEDD4L-222ENST00000588494 DPY19L2Q6NUT2 758 aa7.11□□□□□ -1.27
NEDD4L-222ENST00000588494 L3MBTL3Q96JM7 780 aaPredicted RBP7.11□□□□□ -1.27
NEDD4L-222ENST00000588494 G3V3G9 751 aa7.1□□□□□ -1.27
NEDD4L-222ENST00000588494 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
NEDD4L-222ENST00000588494 HOXB3P14651 431 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-222ENST00000588494 LARP6Q9BRS8 491 aaKnown RBP7.08□□□□□ -1.28
NEDD4L-222ENST00000588494 PDE4AP27815 886 aa7.06□□□□□ -1.28
NEDD4L-222ENST00000588494 ILDR1Q86SU0 546 aaPredicted RBP7.06□□□□□ -1.28
NEDD4L-222ENST00000588494 ZNF710Q8N1W2 664 aa7.06□□□□□ -1.28
NEDD4L-222ENST00000588494 VARS2Q5ST30 1063 aaKnown RBP7.05□□□□□ -1.28
NEDD4L-222ENST00000588494 P3H3Q8IVL6 736 aa7.05□□□□□ -1.28
NEDD4L-222ENST00000588494 NCKAP5LQ9HCH0 1330 aa7.04□□□□□ -1.28
NEDD4L-222ENST00000588494 PTGER2P43116 358 aa7.04□□□□□ -1.28
NEDD4L-222ENST00000588494 MICALL2Q8IY33 904 aa7.04□□□□□ -1.28
NEDD4L-222ENST00000588494 BOLA1Q9Y3E2 137 aa7.04□□□□□ -1.28
NEDD4L-222ENST00000588494 KCNV2Q8TDN2 545 aa7.03□□□□□ -1.28
NEDD4L-222ENST00000588494 E2F4Q16254 413 aa7.02□□□□□ -1.29
NEDD4L-222ENST00000588494 DDX27Q96GQ7 796 aaKnown RBP7.02□□□□□ -1.29
NEDD4L-222ENST00000588494 TMC2Q8TDI7 906 aa7.01□□□□□ -1.29
NEDD4L-222ENST00000588494 CRISPLD2Q9H0B8 497 aa7.01□□□□□ -1.29
NEDD4L-222ENST00000588494 PLA2G2EQ9NZK7 142 aa7.01□□□□□ -1.29
NEDD4L-222ENST00000588494 ZNF687Q8N1G0 1237 aa7□□□□□ -1.29
NEDD4L-222ENST00000588494 DOK7Q18PE1 504 aa6.99□□□□□ -1.29
NEDD4L-222ENST00000588494 PPP1R15BQ5SWA1 713 aa6.98□□□□□ -1.29
NEDD4L-222ENST00000588494 GPHNQ9NQX3 736 aaPredicted RBP6.98□□□□□ -1.29
NEDD4L-222ENST00000588494 MFSD10Q14728 455 aa6.97□□□□□ -1.29
NEDD4L-222ENST00000588494 PRKCSHP14314 528 aaPredicted RBP6.96□□□□□ -1.3
NEDD4L-222ENST00000588494 DSG2Q14126 1118 aa6.96□□□□□ -1.3
NEDD4L-222ENST00000588494 ANKRD13DQ6ZTN6 518 aa6.96□□□□□ -1.3
NEDD4L-222ENST00000588494 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
NEDD4L-222ENST00000588494 TPRNQ4KMQ1 711 aa6.95□□□□□ -1.3
NEDD4L-222ENST00000588494 ARHGEF1Q92888 912 aaKnown RBP6.95□□□□□ -1.3
NEDD4L-222ENST00000588494 RIMBP2O15034 1052 aa6.94□□□□□ -1.3
NEDD4L-222ENST00000588494 PLPP6Q8IY26 295 aa6.93□□□□□ -1.3
NEDD4L-222ENST00000588494 TULP1O00294 542 aaPredicted RBP6.91□□□□□ -1.3
NEDD4L-222ENST00000588494 FOXK1P85037 733 aa6.91□□□□□ -1.3
NEDD4L-222ENST00000588494 TMEM92Q6UXU6 159 aa6.91□□□□□ -1.3
NEDD4L-222ENST00000588494 SEMA3EO15041 775 aa6.9□□□□□ -1.3
NEDD4L-222ENST00000588494 CAMK2BQ13554 666 aa6.9□□□□□ -1.3
NEDD4L-222ENST00000588494 DPYSL4O14531 572 aa6.89□□□□□ -1.31
NEDD4L-222ENST00000588494 UPF1Q92900 1129 aaKnown RBP eCLIP6.89□□□□□ -1.31
NEDD4L-222ENST00000588494 KIF3CO14782 793 aa6.88□□□□□ -1.31
NEDD4L-222ENST00000588494 EMILIN3Q9NT22 766 aa6.88□□□□□ -1.31
NEDD4L-222ENST00000588494 ZSWIM6Q9HCJ5 1215 aa6.87□□□□□ -1.31
NEDD4L-222ENST00000588494 HCSTQ9UBK5 93 aa6.87□□□□□ -1.31
NEDD4L-222ENST00000588494 MAP3K9P80192 1104 aa6.86□□□□□ -1.31
NEDD4L-222ENST00000588494 LSM11P83369 360 aaKnown RBP eCLIP6.86□□□□□ -1.31
NEDD4L-222ENST00000588494 GPR153Q6NV75 609 aa6.85□□□□□ -1.31
NEDD4L-222ENST00000588494 LMOD2Q6P5Q4 547 aa6.85□□□□□ -1.31
NEDD4L-222ENST00000588494 SMYD5Q6GMV2 418 aa6.84□□□□□ -1.31
NEDD4L-222ENST00000588494 TESPA1A2RU30 521 aaPredicted RBP6.83□□□□□ -1.32
NEDD4L-222ENST00000588494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.83□□□□□ -1.32
NEDD4L-222ENST00000588494 ARIH1Q9Y4X5 557 aaPredicted RBP6.83□□□□□ -1.32
NEDD4L-222ENST00000588494 MLLT3P42568 568 aaPredicted RBP6.82□□□□□ -1.32
NEDD4L-222ENST00000588494 IRX2Q9BZI1 471 aaPredicted RBP6.81□□□□□ -1.32
NEDD4L-222ENST00000588494 GRXCR2A6NFK2 248 aa6.8□□□□□ -1.32
NEDD4L-222ENST00000588494 SPDYE16A6NNV3 312 aaPredicted RBP6.8□□□□□ -1.32
NEDD4L-222ENST00000588494 TBC1D12O60347 775 aa6.8□□□□□ -1.32
NEDD4L-222ENST00000588494 PDIA6Q15084 440 aa6.8□□□□□ -1.32
NEDD4L-222ENST00000588494 ZNF316A6NFI3 1004 aaPredicted RBP6.79□□□□□ -1.32
NEDD4L-222ENST00000588494 OXER1Q8TDS5 423 aa6.79□□□□□ -1.32
NEDD4L-222ENST00000588494 EVI5O60447 810 aa6.77□□□□□ -1.33
NEDD4L-222ENST00000588494 ARSIQ5FYB1 569 aa6.77□□□□□ -1.33
NEDD4L-222ENST00000588494 RBM26Q5T8P6 1007 aaKnown RBP6.77□□□□□ -1.33
NEDD4L-222ENST00000588494 DDX12PQ92771 950 aa6.77□□□□□ -1.33
NEDD4L-222ENST00000588494 PTCD2Q8WV60 388 aaKnown RBP6.75□□□□□ -1.33
NEDD4L-222ENST00000588494 PCDHGA4Q9Y5G9 962 aa6.75□□□□□ -1.33
NEDD4L-222ENST00000588494 SLC34A2O95436 690 aa6.74□□□□□ -1.33
NEDD4L-222ENST00000588494 GPIHBP1Q8IV16 184 aa6.74□□□□□ -1.33
NEDD4L-222ENST00000588494 ZC3H15Q8WU90 426 aaKnown RBP6.74□□□□□ -1.33
NEDD4L-222ENST00000588494 KHSRPQ92945 711 aaKnown RBP eCLIP6.73□□□□□ -1.331e-7■□□□□ 8.4
NEDD4L-222ENST00000588494 NUTM2FA1L443 756 aa6.72□□□□□ -1.33
NEDD4L-222ENST00000588494 RGS20O76081 388 aa6.72□□□□□ -1.33
NEDD4L-222ENST00000588494 PBX2P40425 430 aa6.72□□□□□ -1.33
NEDD4L-222ENST00000588494 POTEEQ6S8J3 1075 aa6.72□□□□□ -1.33
NEDD4L-222ENST00000588494 AXIN2Q9Y2T1 843 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms