RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 RICTORQ6R327 1708 aa25.48■■□□□ 1.67
RETREG3-206ENST00000588423 CDC42BPBQ9Y5S2 1711 aa25.47■■□□□ 1.67
RETREG3-206ENST00000588423 TIAM1Q13009 1591 aa25.47■■□□□ 1.67
RETREG3-206ENST00000588423 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
RETREG3-206ENST00000588423 MAP3K1Q13233 1512 aa25.45■■□□□ 1.66
RETREG3-206ENST00000588423 ZMYM4Q5VZL5 1548 aa25.44■■□□□ 1.66
RETREG3-206ENST00000588423 CDC42BPAQ5VT25 1732 aa25.44■■□□□ 1.66
RETREG3-206ENST00000588423 POGZQ7Z3K3 1410 aa25.44■■□□□ 1.66
RETREG3-206ENST00000588423 GPATCH8Q9UKJ3 1502 aaKnown RBP25.43■■□□□ 1.66
RETREG3-206ENST00000588423 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
RETREG3-206ENST00000588423 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
RETREG3-206ENST00000588423 ZNF518AQ6AHZ1 1483 aa25.38■■□□□ 1.65
RETREG3-206ENST00000588423 KDM4FA0A1W2PPD8 638 aa25.37■■□□□ 1.65
RETREG3-206ENST00000588423 ABCC1P33527 1531 aa25.37■■□□□ 1.65
RETREG3-206ENST00000588423 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
RETREG3-206ENST00000588423 LRRC9Q6ZRR7 1453 aa25.36■■□□□ 1.65
RETREG3-206ENST00000588423 AEBP2Q6ZN18 517 aaPredicted RBP25.36■■□□□ 1.65
RETREG3-206ENST00000588423 SUPT6HQ7KZ85 1726 aaKnown RBP25.34■■□□□ 1.65
RETREG3-206ENST00000588423 KDM5CP41229 1560 aa25.33■■□□□ 1.65
RETREG3-206ENST00000588423 CFDP1Q9UEE9 299 aaPredicted RBP25.33■■□□□ 1.65
RETREG3-206ENST00000588423 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
RETREG3-206ENST00000588423 NCOA2Q15596 1464 aa25.32■■□□□ 1.64
RETREG3-206ENST00000588423 ITSN2Q9NZM3 1697 aa25.32■■□□□ 1.64
RETREG3-206ENST00000588423 SAMD9LQ8IVG5 1584 aa25.31■■□□□ 1.64
RETREG3-206ENST00000588423 ARHGEF12Q9NZN5 1544 aa25.31■■□□□ 1.64
RETREG3-206ENST00000588423 PLEKHH2Q8IVE3 1493 aa25.3■■□□□ 1.64
RETREG3-206ENST00000588423 KIAA1107Q9UPP5 1409 aa25.29■■□□□ 1.64
RETREG3-206ENST00000588423 AFAP1Q8N556 730 aa25.29■■□□□ 1.64
RETREG3-206ENST00000588423 YEATS2Q9ULM3 1422 aa25.29■■□□□ 1.64
RETREG3-206ENST00000588423 TRAPPC8Q9Y2L5 1435 aa25.28■■□□□ 1.64
RETREG3-206ENST00000588423 APLP2Q06481 763 aa25.27■■□□□ 1.64
RETREG3-206ENST00000588423 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
RETREG3-206ENST00000588423 KANK4Q5T7N3 995 aaPredicted RBP25.26■■□□□ 1.63
RETREG3-206ENST00000588423 MLH3Q9UHC1 1453 aa25.26■■□□□ 1.63
RETREG3-206ENST00000588423 HECW2Q9P2P5 1572 aa25.25■■□□□ 1.63
RETREG3-206ENST00000588423 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
RETREG3-206ENST00000588423 ATP10AO60312 1499 aa25.22■■□□□ 1.63
RETREG3-206ENST00000588423 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.62
RETREG3-206ENST00000588423 HNRNPMP52272 730 aaKnown RBP eCLIP25.19■■□□□ 1.62
RETREG3-206ENST00000588423 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
RETREG3-206ENST00000588423 BCORL1Q5H9F3 1711 aa25.17■■□□□ 1.62
RETREG3-206ENST00000588423 ZNF644Q9H582 1327 aaPredicted RBP25.16■■□□□ 1.62
RETREG3-206ENST00000588423 DIP2CQ9Y2E4 1556 aa25.16■■□□□ 1.62
RETREG3-206ENST00000588423 MBD5Q9P267 1494 aa25.15■■□□□ 1.62
RETREG3-206ENST00000588423 REREQ9P2R6 1566 aa25.15■■□□□ 1.62
RETREG3-206ENST00000588423 MYT1LQ9UL68 1186 aa25.15■■□□□ 1.62
RETREG3-206ENST00000588423 ADAMTSL3P82987 1691 aa25.15■■□□□ 1.62
RETREG3-206ENST00000588423 CAMSAP2Q08AD1 1489 aa25.14■■□□□ 1.61
RETREG3-206ENST00000588423 KIDINS220Q9ULH0 1771 aa25.13■■□□□ 1.61
RETREG3-206ENST00000588423 MYOM3Q5VTT5 1437 aa25.13■■□□□ 1.61
RETREG3-206ENST00000588423 ABCA6Q8N139 1617 aa25.13■■□□□ 1.61
RETREG3-206ENST00000588423 SIGLEC1Q9BZZ2 1709 aa25.13■■□□□ 1.61
RETREG3-206ENST00000588423 SPAG9O60271 1321 aaKnown RBP25.12■■□□□ 1.61
RETREG3-206ENST00000588423 MIA2Q96PC5 1412 aa25.12■■□□□ 1.61
RETREG3-206ENST00000588423 RSPH4AQ5TD94 716 aa25.11■■□□□ 1.61
RETREG3-206ENST00000588423 INO80Q9ULG1 1556 aaPredicted RBP25.09■■□□□ 1.61
RETREG3-206ENST00000588423 ATP7AQ04656 1500 aa25.08■■□□□ 1.61
RETREG3-206ENST00000588423 CCDC141Q6ZP82 1450 aa25.07■■□□□ 1.6
RETREG3-206ENST00000588423 AGLP35573 1532 aa25.07■■□□□ 1.6
RETREG3-206ENST00000588423 RTEL1-TNFRSF6BF6WH68 1400 aa25.06■■□□□ 1.6
RETREG3-206ENST00000588423 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
RETREG3-206ENST00000588423 MADDQ8WXG6 1647 aa25.04■■□□□ 1.6
RETREG3-206ENST00000588423 PTPRMP28827 1452 aa25.02■■□□□ 1.6
RETREG3-206ENST00000588423 MLECQ14165 292 aa24.98■■□□□ 1.59
RETREG3-206ENST00000588423 PLXNC1O60486 1568 aa24.97■■□□□ 1.59
RETREG3-206ENST00000588423 A2MP01023 1474 aa24.97■■□□□ 1.59
RETREG3-206ENST00000588423 FGD6Q6ZV73 1430 aa24.96■■□□□ 1.59
RETREG3-206ENST00000588423 TSPY4P0CV99 314 aa24.96■■□□□ 1.59
RETREG3-206ENST00000588423 TSPY10P0CW01 314 aa24.96■■□□□ 1.59
RETREG3-206ENST00000588423 ADGBQ8N7X0 1667 aa24.96■■□□□ 1.59
RETREG3-206ENST00000588423 RIMS1Q86UR5 1692 aaKnown RBP24.95■■□□□ 1.58
RETREG3-206ENST00000588423 PTPN23Q9H3S7 1636 aa24.95■■□□□ 1.58
RETREG3-206ENST00000588423 TCOF1Q13428 1488 aaKnown RBP24.95■■□□□ 1.58
RETREG3-206ENST00000588423 MAST1Q9Y2H9 1570 aa24.93■■□□□ 1.58
RETREG3-206ENST00000588423 FER1L4A9Z1Z3 1794 aa24.93■■□□□ 1.58
RETREG3-206ENST00000588423 DHX29Q7Z478 1369 aaKnown RBP24.9■■□□□ 1.58
RETREG3-206ENST00000588423 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
RETREG3-206ENST00000588423 ABCC5O15440 1437 aa24.85■■□□□ 1.57
RETREG3-206ENST00000588423 CNTLNQ9NXG0 1405 aa24.84■■□□□ 1.57
RETREG3-206ENST00000588423 DNMT1P26358 1616 aaKnown RBP24.83■■□□□ 1.57
RETREG3-206ENST00000588423 DAPK1P53355 1430 aa24.83■■□□□ 1.57
RETREG3-206ENST00000588423 CROCC2H7BZ55 1655 aa24.82■■□□□ 1.56
RETREG3-206ENST00000588423 ESF1Q9H501 851 aaKnown RBP24.82■■□□□ 1.56
RETREG3-206ENST00000588423 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
RETREG3-206ENST00000588423 GGT6Q6P531 493 aa24.76■■□□□ 1.55
RETREG3-206ENST00000588423 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
RETREG3-206ENST00000588423 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
RETREG3-206ENST00000588423 KIF3BO15066 747 aa24.74■■□□□ 1.55
RETREG3-206ENST00000588423 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
RETREG3-206ENST00000588423 EIF2AK4Q9P2K8 1649 aaKnown RBP24.73■■□□□ 1.55
RETREG3-206ENST00000588423 FAM50AQ14320 339 aaKnown RBP24.73■■□□□ 1.55
RETREG3-206ENST00000588423 C3P01024 1663 aa24.72■■□□□ 1.55
RETREG3-206ENST00000588423 CEBPAP49715 358 aaPredicted RBP24.72■■□□□ 1.55
RETREG3-206ENST00000588423 PLPPR3Q6T4P5 718 aa24.72■■□□□ 1.55
RETREG3-206ENST00000588423 KIF15Q9NS87 1388 aa24.71■■□□□ 1.55
RETREG3-206ENST00000588423 LMTK3Q96Q04 1460 aa24.7■■□□□ 1.55
RETREG3-206ENST00000588423 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
RETREG3-206ENST00000588423 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.55
RETREG3-206ENST00000588423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.7■■□□□ 1.55
RETREG3-206ENST00000588423 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms