RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 GPATCH8Q9UKJ3 1502 aaKnown RBP19.67■□□□□ 0.74
GCDH-207ENST00000588242 CDC42BPAQ5VT25 1732 aa19.67■□□□□ 0.74
GCDH-207ENST00000588242 CFAP74Q9C0B2 1584 aa19.66■□□□□ 0.74
GCDH-207ENST00000588242 NEO1Q92859 1461 aa19.66■□□□□ 0.74
GCDH-207ENST00000588242 EFCAB2Q5VUJ9 269 aa19.65■□□□□ 0.74
GCDH-207ENST00000588242 CDC42BPBQ9Y5S2 1711 aa19.65■□□□□ 0.74
GCDH-207ENST00000588242 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.73
GCDH-207ENST00000588242 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
GCDH-207ENST00000588242 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
GCDH-207ENST00000588242 CFDP1Q9UEE9 299 aaPredicted RBP19.62■□□□□ 0.73
GCDH-207ENST00000588242 AKNAQ7Z591 1439 aa19.61■□□□□ 0.73
GCDH-207ENST00000588242 KDM6BO15054 1643 aa19.6■□□□□ 0.73
GCDH-207ENST00000588242 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
GCDH-207ENST00000588242 MYOM3Q5VTT5 1437 aa19.59■□□□□ 0.73
GCDH-207ENST00000588242 ADGRL1O94910 1474 aa19.57■□□□□ 0.72
GCDH-207ENST00000588242 COL17A1Q9UMD9 1497 aaPredicted RBP19.55■□□□□ 0.72
GCDH-207ENST00000588242 SAMD9LQ8IVG5 1584 aa19.55■□□□□ 0.72
GCDH-207ENST00000588242 MIA2Q96PC5 1412 aa19.54■□□□□ 0.72
GCDH-207ENST00000588242 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
GCDH-207ENST00000588242 ABCC1P33527 1531 aa19.54■□□□□ 0.72
GCDH-207ENST00000588242 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
GCDH-207ENST00000588242 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
GCDH-207ENST00000588242 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
GCDH-207ENST00000588242 FGD6Q6ZV73 1430 aa19.51■□□□□ 0.71
GCDH-207ENST00000588242 CAMSAP2Q08AD1 1489 aa19.5■□□□□ 0.71
GCDH-207ENST00000588242 RAPGEF3O95398 923 aa19.5■□□□□ 0.71
GCDH-207ENST00000588242 KIAA1107Q9UPP5 1409 aa19.5■□□□□ 0.71
GCDH-207ENST00000588242 SYCP2Q9BX26 1530 aa19.49■□□□□ 0.71
GCDH-207ENST00000588242 ARHGEF12Q9NZN5 1544 aa19.49■□□□□ 0.71
GCDH-207ENST00000588242 POGZQ7Z3K3 1410 aa19.49■□□□□ 0.71
GCDH-207ENST00000588242 FRMPD1Q5SYB0 1578 aa19.48■□□□□ 0.71
GCDH-207ENST00000588242 HNRNPMP52272 730 aaKnown RBP eCLIP19.47■□□□□ 0.71
GCDH-207ENST00000588242 RICTORQ6R327 1708 aa19.47■□□□□ 0.71
GCDH-207ENST00000588242 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
GCDH-207ENST00000588242 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
GCDH-207ENST00000588242 TRAPPC8Q9Y2L5 1435 aa19.45■□□□□ 0.7
GCDH-207ENST00000588242 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
GCDH-207ENST00000588242 MBD5Q9P267 1494 aa19.43■□□□□ 0.7
GCDH-207ENST00000588242 AFAP1Q8N556 730 aa19.43■□□□□ 0.7
GCDH-207ENST00000588242 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
GCDH-207ENST00000588242 KDM5CP41229 1560 aa19.41■□□□□ 0.7
GCDH-207ENST00000588242 FAM50AQ14320 339 aaKnown RBP19.4■□□□□ 0.7
GCDH-207ENST00000588242 RSPH4AQ5TD94 716 aa19.4■□□□□ 0.7
GCDH-207ENST00000588242 CCDC141Q6ZP82 1450 aa19.4■□□□□ 0.7
GCDH-207ENST00000588242 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
GCDH-207ENST00000588242 MYT1LQ9UL68 1186 aa19.38■□□□□ 0.69
GCDH-207ENST00000588242 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
GCDH-207ENST00000588242 MAGI2Q86UL8 1455 aa19.37■□□□□ 0.69
GCDH-207ENST00000588242 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
GCDH-207ENST00000588242 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
GCDH-207ENST00000588242 MLH3Q9UHC1 1453 aa19.35■□□□□ 0.69
GCDH-207ENST00000588242 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
GCDH-207ENST00000588242 HRCP23327 699 aa19.35■□□□□ 0.69
GCDH-207ENST00000588242 TSPY4P0CV99 314 aa19.34■□□□□ 0.69
GCDH-207ENST00000588242 TSPY10P0CW01 314 aa19.34■□□□□ 0.69
GCDH-207ENST00000588242 YEATS2Q9ULM3 1422 aa19.34■□□□□ 0.69
GCDH-207ENST00000588242 DNMT1P26358 1616 aaKnown RBP19.33■□□□□ 0.69
GCDH-207ENST00000588242 ARHGEF40Q8TER5 1519 aa19.33■□□□□ 0.68
GCDH-207ENST00000588242 ABCC5O15440 1437 aa19.33■□□□□ 0.68
GCDH-207ENST00000588242 DAPK1P53355 1430 aa19.33■□□□□ 0.68
GCDH-207ENST00000588242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.32■□□□□ 0.68
GCDH-207ENST00000588242 INO80Q9ULG1 1556 aaPredicted RBP19.32■□□□□ 0.68
GCDH-207ENST00000588242 ATP7AQ04656 1500 aa19.32■□□□□ 0.68
GCDH-207ENST00000588242 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
GCDH-207ENST00000588242 RTEL1-TNFRSF6BF6WH68 1400 aa19.3■□□□□ 0.68
GCDH-207ENST00000588242 MAST1Q9Y2H9 1570 aa19.29■□□□□ 0.68
GCDH-207ENST00000588242 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
GCDH-207ENST00000588242 CROCC2H7BZ55 1655 aa19.29■□□□□ 0.68
GCDH-207ENST00000588242 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
GCDH-207ENST00000588242 ABCA6Q8N139 1617 aa19.28■□□□□ 0.68
GCDH-207ENST00000588242 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.68
GCDH-207ENST00000588242 ATP10AO60312 1499 aa19.27■□□□□ 0.67
GCDH-207ENST00000588242 ITGAEP38570 1179 aa19.25■□□□□ 0.67
GCDH-207ENST00000588242 CHIC2Q9UKJ5 165 aa19.24■□□□□ 0.67
GCDH-207ENST00000588242 ADGBQ8N7X0 1667 aa19.21■□□□□ 0.67
GCDH-207ENST00000588242 PLXNC1O60486 1568 aa19.21■□□□□ 0.67
GCDH-207ENST00000588242 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
GCDH-207ENST00000588242 REREQ9P2R6 1566 aa19.21■□□□□ 0.67
GCDH-207ENST00000588242 A2MP01023 1474 aa19.21■□□□□ 0.67
GCDH-207ENST00000588242 ANKRD30AQ9BXX3 1397 aa19.2■□□□□ 0.66
GCDH-207ENST00000588242 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
GCDH-207ENST00000588242 ADGRL2O95490 1459 aa19.19■□□□□ 0.66
GCDH-207ENST00000588242 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
GCDH-207ENST00000588242 KIF15Q9NS87 1388 aa19.18■□□□□ 0.66
GCDH-207ENST00000588242 DHX29Q7Z478 1369 aaKnown RBP19.17■□□□□ 0.66
GCDH-207ENST00000588242 SIGLEC1Q9BZZ2 1709 aa19.17■□□□□ 0.66
GCDH-207ENST00000588242 NCOA1Q15788 1441 aa19.17■□□□□ 0.66
GCDH-207ENST00000588242 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
GCDH-207ENST00000588242 AGLP35573 1532 aa19.15■□□□□ 0.66
GCDH-207ENST00000588242 ROCK1Q13464 1354 aa19.15■□□□□ 0.66
GCDH-207ENST00000588242 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
GCDH-207ENST00000588242 MLECQ14165 292 aa19.1■□□□□ 0.65
GCDH-207ENST00000588242 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
GCDH-207ENST00000588242 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
GCDH-207ENST00000588242 KIF3BO15066 747 aa19.09■□□□□ 0.65
GCDH-207ENST00000588242 EIF2AK4Q9P2K8 1649 aaKnown RBP19.07■□□□□ 0.64
GCDH-207ENST00000588242 ANKRD50Q9ULJ7 1429 aa19.07■□□□□ 0.64
GCDH-207ENST00000588242 GGT6Q6P531 493 aa19.05■□□□□ 0.64
GCDH-207ENST00000588242 HFM1A2PYH4 1435 aa19.03■□□□□ 0.64
GCDH-207ENST00000588242 NAIPQ13075 1403 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms