RNA–Protein interactions for RNA: ENST00000588019.1

NLE1-204, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-204ENST00000588019 ARAP3Q8WWN8 1544 aa24.53■■□□□ 1.52
NLE1-204ENST00000588019 GLI2P10070 1586 aa24.51■■□□□ 1.51
NLE1-204ENST00000588019 EFCAB2Q5VUJ9 269 aa24.51■■□□□ 1.51
NLE1-204ENST00000588019 ZNF777Q9ULD5 760 aaPredicted RBP24.51■■□□□ 1.51
NLE1-204ENST00000588019 ARHGAP5Q13017 1502 aa24.51■■□□□ 1.51
NLE1-204ENST00000588019 CD109Q6YHK3 1445 aa24.49■■□□□ 1.51
NLE1-204ENST00000588019 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
NLE1-204ENST00000588019 CAMSAP2Q08AD1 1489 aa24.48■■□□□ 1.51
NLE1-204ENST00000588019 ZNF644Q9H582 1327 aaPredicted RBP24.47■■□□□ 1.51
NLE1-204ENST00000588019 FAM69CQ0P6D2 419 aa24.46■■□□□ 1.51
NLE1-204ENST00000588019 DIP2BQ9P265 1576 aa24.46■■□□□ 1.51
NLE1-204ENST00000588019 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.5
NLE1-204ENST00000588019 ITGAEP38570 1179 aa24.43■■□□□ 1.5
NLE1-204ENST00000588019 FANCAO15360 1455 aa24.41■■□□□ 1.5
NLE1-204ENST00000588019 RSPH4AQ5TD94 716 aa24.41■■□□□ 1.5
NLE1-204ENST00000588019 KIAA1107Q9UPP5 1409 aa24.41■■□□□ 1.5
NLE1-204ENST00000588019 SAMD9LQ8IVG5 1584 aa24.41■■□□□ 1.5
NLE1-204ENST00000588019 MAP3K4Q9Y6R4 1608 aa24.4■■□□□ 1.5
NLE1-204ENST00000588019 DAPK1P53355 1430 aa24.36■■□□□ 1.49
NLE1-204ENST00000588019 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
NLE1-204ENST00000588019 CFAP74Q9C0B2 1584 aa24.36■■□□□ 1.49
NLE1-204ENST00000588019 ABCC5O15440 1437 aa24.35■■□□□ 1.49
NLE1-204ENST00000588019 HNRNPMP52272 730 aaKnown RBP eCLIP24.35■■□□□ 1.49
NLE1-204ENST00000588019 ARHGEF5Q12774 1597 aa24.34■■□□□ 1.49
NLE1-204ENST00000588019 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
NLE1-204ENST00000588019 NEO1Q92859 1461 aa24.33■■□□□ 1.49
NLE1-204ENST00000588019 ABCC1P33527 1531 aa24.33■■□□□ 1.49
NLE1-204ENST00000588019 AKNAQ7Z591 1439 aa24.33■■□□□ 1.49
NLE1-204ENST00000588019 SYCP2Q9BX26 1530 aa24.32■■□□□ 1.48
NLE1-204ENST00000588019 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
NLE1-204ENST00000588019 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
NLE1-204ENST00000588019 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
NLE1-204ENST00000588019 CCDC141Q6ZP82 1450 aa24.31■■□□□ 1.48
NLE1-204ENST00000588019 ADGRL1O94910 1474 aa24.3■■□□□ 1.48
NLE1-204ENST00000588019 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
NLE1-204ENST00000588019 TEX14Q8IWB6 1497 aa24.29■■□□□ 1.48
NLE1-204ENST00000588019 SHANK2Q9UPX8 1470 aa24.28■■□□□ 1.48
NLE1-204ENST00000588019 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
NLE1-204ENST00000588019 SCAPERQ9BY12 1400 aa24.27■■□□□ 1.48
NLE1-204ENST00000588019 ROCK1Q13464 1354 aa24.27■■□□□ 1.48
NLE1-204ENST00000588019 CHIC2Q9UKJ5 165 aa24.26■■□□□ 1.47
NLE1-204ENST00000588019 CROCC2H7BZ55 1655 aa24.24■■□□□ 1.47
NLE1-204ENST00000588019 C9orf84Q5VXU9 1444 aa24.23■■□□□ 1.47
NLE1-204ENST00000588019 TRAPPC8Q9Y2L5 1435 aa24.22■■□□□ 1.47
NLE1-204ENST00000588019 TRHP20396 242 aaPredicted RBP24.22■■□□□ 1.47
NLE1-204ENST00000588019 ADGRL2O95490 1459 aa24.21■■□□□ 1.47
NLE1-204ENST00000588019 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
NLE1-204ENST00000588019 ANKRD30AQ9BXX3 1397 aa24.21■■□□□ 1.47
NLE1-204ENST00000588019 SETD5Q9C0A6 1442 aa24.2■■□□□ 1.46
NLE1-204ENST00000588019 PPRC1Q5VV67 1664 aaKnown RBP24.2■■□□□ 1.46
NLE1-204ENST00000588019 MAST1Q9Y2H9 1570 aa24.19■■□□□ 1.46
NLE1-204ENST00000588019 AFAP1Q8N556 730 aa24.18■■□□□ 1.46
NLE1-204ENST00000588019 RRP7BPQ9NSQ0 103 aa24.18■■□□□ 1.46
NLE1-204ENST00000588019 DENND4BO75064 1496 aaPredicted RBP24.18■■□□□ 1.46
NLE1-204ENST00000588019 ZNF518AQ6AHZ1 1483 aa24.18■■□□□ 1.46
NLE1-204ENST00000588019 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
NLE1-204ENST00000588019 TSPOAP1O95153 1857 aa24.17■■□□□ 1.46
NLE1-204ENST00000588019 NAIPQ13075 1403 aa24.17■■□□□ 1.46
NLE1-204ENST00000588019 SPAG9O60271 1321 aaKnown RBP24.16■■□□□ 1.46
NLE1-204ENST00000588019 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
NLE1-204ENST00000588019 RTEL1-TNFRSF6BF6WH68 1400 aa24.16■■□□□ 1.46
NLE1-204ENST00000588019 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
NLE1-204ENST00000588019 HRCP23327 699 aa24.15■■□□□ 1.46
NLE1-204ENST00000588019 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
NLE1-204ENST00000588019 GCC2Q8IWJ2 1684 aa24.1■■□□□ 1.45
NLE1-204ENST00000588019 ACIN1Q9UKV3 1341 aaKnown RBP24.1■■□□□ 1.45
NLE1-204ENST00000588019 KDM5CP41229 1560 aa24.09■■□□□ 1.45
NLE1-204ENST00000588019 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
NLE1-204ENST00000588019 PLXNC1O60486 1568 aa24.08■■□□□ 1.45
NLE1-204ENST00000588019 MYT1LQ9UL68 1186 aa24.08■■□□□ 1.45
NLE1-204ENST00000588019 ZFYVE16Q7Z3T8 1539 aa24.07■■□□□ 1.44
NLE1-204ENST00000588019 RAPGEF3O95398 923 aa24.07■■□□□ 1.44
NLE1-204ENST00000588019 MLH3Q9UHC1 1453 aa24.07■■□□□ 1.44
NLE1-204ENST00000588019 ATP7AQ04656 1500 aa24.06■■□□□ 1.44
NLE1-204ENST00000588019 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
NLE1-204ENST00000588019 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
NLE1-204ENST00000588019 RICTORQ6R327 1708 aa24.03■■□□□ 1.44
NLE1-204ENST00000588019 HECW2Q9P2P5 1572 aa24.02■■□□□ 1.44
NLE1-204ENST00000588019 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
NLE1-204ENST00000588019 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
NLE1-204ENST00000588019 FRMPD1Q5SYB0 1578 aa23.99■■□□□ 1.43
NLE1-204ENST00000588019 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
NLE1-204ENST00000588019 KIDINS220Q9ULH0 1771 aa23.98■■□□□ 1.43
NLE1-204ENST00000588019 ERBINQ96RT1 1412 aa23.97■■□□□ 1.43
NLE1-204ENST00000588019 COL17A1Q9UMD9 1497 aaPredicted RBP23.97■■□□□ 1.43
NLE1-204ENST00000588019 KDM6BO15054 1643 aa23.95■■□□□ 1.42
NLE1-204ENST00000588019 DHX29Q7Z478 1369 aaKnown RBP23.94■■□□□ 1.42
NLE1-204ENST00000588019 CCER1Q8TC90 406 aaPredicted RBP23.93■■□□□ 1.42
NLE1-204ENST00000588019 TRIM52Q96A61 297 aa23.92■■□□□ 1.42
NLE1-204ENST00000588019 A2MP01023 1474 aa23.91■■□□□ 1.42
NLE1-204ENST00000588019 DHX57Q6P158 1386 aaKnown RBP23.9■■□□□ 1.42
NLE1-204ENST00000588019 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
NLE1-204ENST00000588019 DIP2CQ9Y2E4 1556 aa23.87■■□□□ 1.41
NLE1-204ENST00000588019 YEATS2Q9ULM3 1422 aa23.87■■□□□ 1.41
NLE1-204ENST00000588019 ATP10AO60312 1499 aa23.85■■□□□ 1.41
NLE1-204ENST00000588019 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
NLE1-204ENST00000588019 NUP155O75694 1391 aa23.82■■□□□ 1.4
NLE1-204ENST00000588019 KIF3BO15066 747 aa23.82■■□□□ 1.4
NLE1-204ENST00000588019 CLSPNQ9HAW4 1339 aa23.82■■□□□ 1.4
NLE1-204ENST00000588019 UNC13BO14795 1591 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms