RNA–Protein interactions for RNA: ENST00000587956.5

RANBP3-213, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-213ENST00000587956 EFCAB2Q5VUJ9 269 aa22.7■■□□□ 1.22
RANBP3-213ENST00000587956 BCORL1Q5H9F3 1711 aa22.68■■□□□ 1.22
RANBP3-213ENST00000587956 ZFYVE16Q7Z3T8 1539 aa22.67■■□□□ 1.22
RANBP3-213ENST00000587956 ADAMTSL3P82987 1691 aa22.67■■□□□ 1.22
RANBP3-213ENST00000587956 ZMYM4Q5VZL5 1548 aa22.67■■□□□ 1.22
RANBP3-213ENST00000587956 YEATS2Q9ULM3 1422 aa22.66■■□□□ 1.22
RANBP3-213ENST00000587956 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
RANBP3-213ENST00000587956 PREX2Q70Z35 1606 aa22.64■■□□□ 1.22
RANBP3-213ENST00000587956 CDC42BPAQ5VT25 1732 aa22.64■■□□□ 1.21
RANBP3-213ENST00000587956 SIGLEC1Q9BZZ2 1709 aa22.64■■□□□ 1.21
RANBP3-213ENST00000587956 MADDQ8WXG6 1647 aa22.64■■□□□ 1.21
RANBP3-213ENST00000587956 CEP162Q5TB80 1403 aa22.63■■□□□ 1.21
RANBP3-213ENST00000587956 HECW2Q9P2P5 1572 aa22.62■■□□□ 1.21
RANBP3-213ENST00000587956 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
RANBP3-213ENST00000587956 LOC105371045A0A1W2PR82 267 aa22.6■■□□□ 1.21
RANBP3-213ENST00000587956 MYT1LQ9UL68 1186 aa22.6■■□□□ 1.21
RANBP3-213ENST00000587956 PTPRMP28827 1452 aa22.58■■□□□ 1.2
RANBP3-213ENST00000587956 MAGI2Q86UL8 1455 aa22.58■■□□□ 1.2
RANBP3-213ENST00000587956 MLECQ14165 292 aa22.57■■□□□ 1.2
RANBP3-213ENST00000587956 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
RANBP3-213ENST00000587956 AFAP1Q8N556 730 aa22.57■■□□□ 1.2
RANBP3-213ENST00000587956 ITSN2Q9NZM3 1697 aa22.56■■□□□ 1.2
RANBP3-213ENST00000587956 ZNF518AQ6AHZ1 1483 aa22.55■■□□□ 1.2
RANBP3-213ENST00000587956 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
RANBP3-213ENST00000587956 ABCC1P33527 1531 aa22.52■■□□□ 1.2
RANBP3-213ENST00000587956 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
RANBP3-213ENST00000587956 KDM5CP41229 1560 aa22.51■■□□□ 1.19
RANBP3-213ENST00000587956 FER1L4A9Z1Z3 1794 aa22.51■■□□□ 1.19
RANBP3-213ENST00000587956 ATP10AO60312 1499 aa22.51■■□□□ 1.19
RANBP3-213ENST00000587956 ARHGEF12Q9NZN5 1544 aa22.51■■□□□ 1.19
RANBP3-213ENST00000587956 TRAPPC8Q9Y2L5 1435 aa22.5■■□□□ 1.19
RANBP3-213ENST00000587956 SAMD9LQ8IVG5 1584 aa22.49■■□□□ 1.19
RANBP3-213ENST00000587956 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
RANBP3-213ENST00000587956 GPATCH8Q9UKJ3 1502 aaKnown RBP22.48■■□□□ 1.19
RANBP3-213ENST00000587956 DIP2CQ9Y2E4 1556 aa22.47■■□□□ 1.19
RANBP3-213ENST00000587956 ABCA6Q8N139 1617 aa22.47■■□□□ 1.19
RANBP3-213ENST00000587956 CCNB3Q8WWL7 1395 aa22.47■■□□□ 1.19
RANBP3-213ENST00000587956 EHBP1L1Q8N3D4 1523 aa22.45■■□□□ 1.18
RANBP3-213ENST00000587956 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
RANBP3-213ENST00000587956 HNRNPMP52272 730 aaKnown RBP eCLIP22.43■■□□□ 1.187e-7■■■□□ 17.2
RANBP3-213ENST00000587956 CFDP1Q9UEE9 299 aaPredicted RBP22.43■■□□□ 1.18
RANBP3-213ENST00000587956 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
RANBP3-213ENST00000587956 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
RANBP3-213ENST00000587956 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
RANBP3-213ENST00000587956 SUPT6HQ7KZ85 1726 aaKnown RBP22.37■■□□□ 1.17
RANBP3-213ENST00000587956 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
RANBP3-213ENST00000587956 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
RANBP3-213ENST00000587956 REREQ9P2R6 1566 aa22.33■■□□□ 1.17
RANBP3-213ENST00000587956 SPAG9O60271 1321 aaKnown RBP22.33■■□□□ 1.17
RANBP3-213ENST00000587956 PLEKHH2Q8IVE3 1493 aa22.33■■□□□ 1.16
RANBP3-213ENST00000587956 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
RANBP3-213ENST00000587956 LMTK3Q96Q04 1460 aa22.32■■□□□ 1.16
RANBP3-213ENST00000587956 NCOA2Q15596 1464 aa22.31■■□□□ 1.16
RANBP3-213ENST00000587956 ATP7AQ04656 1500 aa22.31■■□□□ 1.16
RANBP3-213ENST00000587956 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
RANBP3-213ENST00000587956 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
RANBP3-213ENST00000587956 HSPA2P54652 639 aa22.28■■□□□ 1.16
RANBP3-213ENST00000587956 AGLP35573 1532 aa22.27■■□□□ 1.16
RANBP3-213ENST00000587956 ESF1Q9H501 851 aaKnown RBP22.26■■□□□ 1.15
RANBP3-213ENST00000587956 C3P01024 1663 aa22.25■■□□□ 1.15
RANBP3-213ENST00000587956 PREX1Q8TCU6 1659 aa22.24■■□□□ 1.15
RANBP3-213ENST00000587956 LRRC9Q6ZRR7 1453 aa22.24■■□□□ 1.15
RANBP3-213ENST00000587956 CAMSAP2Q08AD1 1489 aa22.23■■□□□ 1.15
RANBP3-213ENST00000587956 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
RANBP3-213ENST00000587956 ADGBQ8N7X0 1667 aa22.22■■□□□ 1.15
RANBP3-213ENST00000587956 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
RANBP3-213ENST00000587956 A2MP01023 1474 aa22.2■■□□□ 1.14
RANBP3-213ENST00000587956 SETD1BQ9UPS6 1966 aaKnown RBP22.18■■□□□ 1.14
RANBP3-213ENST00000587956 CLTCQ00610 1675 aaKnown RBP22.17■■□□□ 1.14
RANBP3-213ENST00000587956 PLXNC1O60486 1568 aa22.17■■□□□ 1.14
RANBP3-213ENST00000587956 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
RANBP3-213ENST00000587956 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
RANBP3-213ENST00000587956 GGT6Q6P531 493 aa22.15■■□□□ 1.14
RANBP3-213ENST00000587956 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
RANBP3-213ENST00000587956 APLP2Q06481 763 aa22.13■■□□□ 1.13
RANBP3-213ENST00000587956 MROH2AA6NES4 1674 aa22.12■■□□□ 1.13
RANBP3-213ENST00000587956 UHRF1BP1Q6BDS2 1440 aa22.12■■□□□ 1.13
RANBP3-213ENST00000587956 CNTLNQ9NXG0 1405 aa22.12■■□□□ 1.13
RANBP3-213ENST00000587956 RTEL1-TNFRSF6BF6WH68 1400 aa22.1■■□□□ 1.13
RANBP3-213ENST00000587956 ARHGEF5Q12774 1597 aa22.09■■□□□ 1.13
RANBP3-213ENST00000587956 MYOM3Q5VTT5 1437 aa22.07■■□□□ 1.12
RANBP3-213ENST00000587956 RSPH4AQ5TD94 716 aa22.06■■□□□ 1.12
RANBP3-213ENST00000587956 ZMYM3Q14202 1370 aa22.06■■□□□ 1.12
RANBP3-213ENST00000587956 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
RANBP3-213ENST00000587956 DHX29Q7Z478 1369 aaKnown RBP22.05■■□□□ 1.12
RANBP3-213ENST00000587956 TSPY4P0CV99 314 aa22.05■■□□□ 1.12
RANBP3-213ENST00000587956 TSPY10P0CW01 314 aa22.05■■□□□ 1.12
RANBP3-213ENST00000587956 KIF3BO15066 747 aa22.04■■□□□ 1.12
RANBP3-213ENST00000587956 MIA2Q96PC5 1412 aa22■■□□□ 1.11
RANBP3-213ENST00000587956 PTPN23Q9H3S7 1636 aa21.99■■□□□ 1.11
RANBP3-213ENST00000587956 MAST1Q9Y2H9 1570 aa21.98■■□□□ 1.11
RANBP3-213ENST00000587956 MYO3AQ8NEV4 1616 aa21.97■■□□□ 1.11
RANBP3-213ENST00000587956 NPATQ14207 1427 aa21.97■■□□□ 1.11
RANBP3-213ENST00000587956 PTPRKQ15262 1439 aa21.96■■□□□ 1.11
RANBP3-213ENST00000587956 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
RANBP3-213ENST00000587956 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
RANBP3-213ENST00000587956 KDM5DQ9BY66 1539 aa21.93■■□□□ 1.1
RANBP3-213ENST00000587956 CAMSAP1Q5T5Y3 1602 aa21.92■■□□□ 1.1
RANBP3-213ENST00000587956 ZNF142P52746 1687 aaPredicted RBP21.91■■□□□ 1.1
RANBP3-213ENST00000587956 WASHC2CQ9Y4E1 1318 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms