RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CDC42BPBQ9Y5S2 1711 aa37.46■■■■□ 3.59
CHAF1A-205ENST00000587580 MTUS2Q5JR59 1369 aa37.43■■■■□ 3.58
CHAF1A-205ENST00000587580 KDM4FA0A1W2PPD8 638 aa37.43■■■■□ 3.58
CHAF1A-205ENST00000587580 SCAPERQ9BY12 1400 aa37.42■■■■□ 3.58
CHAF1A-205ENST00000587580 CDC42BPAQ5VT25 1732 aa37.41■■■■□ 3.58
CHAF1A-205ENST00000587580 EHBP1L1Q8N3D4 1523 aa37.4■■■■□ 3.58
CHAF1A-205ENST00000587580 POGZQ7Z3K3 1410 aa37.37■■■■□ 3.57
CHAF1A-205ENST00000587580 ZMYM4Q5VZL5 1548 aa37.37■■■■□ 3.57
CHAF1A-205ENST00000587580 ARHGEF40Q8TER5 1519 aa37.35■■■■□ 3.57
CHAF1A-205ENST00000587580 TIAM1Q13009 1591 aa37.32■■■■□ 3.56
CHAF1A-205ENST00000587580 GPATCH8Q9UKJ3 1502 aaKnown RBP37.29■■■■□ 3.56
CHAF1A-205ENST00000587580 ABCC1P33527 1531 aa37.27■■■■□ 3.56
CHAF1A-205ENST00000587580 ZFYVE16Q7Z3T8 1539 aa37.27■■■■□ 3.56
CHAF1A-205ENST00000587580 CCNB3Q8WWL7 1395 aa37.26■■■■□ 3.55
CHAF1A-205ENST00000587580 ZNF518AQ6AHZ1 1483 aa37.25■■■■□ 3.55
CHAF1A-205ENST00000587580 MAGI2Q86UL8 1455 aa37.25■■■■□ 3.55
CHAF1A-205ENST00000587580 ITSN2Q9NZM3 1697 aa37.23■■■■□ 3.55
CHAF1A-205ENST00000587580 YEATS2Q9ULM3 1422 aa37.22■■■■□ 3.55
CHAF1A-205ENST00000587580 KDM5CP41229 1560 aa37.2■■■■□ 3.55
CHAF1A-205ENST00000587580 SAMD9LQ8IVG5 1584 aa37.2■■■■□ 3.55
CHAF1A-205ENST00000587580 SUPT6HQ7KZ85 1726 aaKnown RBP37.19■■■■□ 3.54
CHAF1A-205ENST00000587580 ZNF777Q9ULD5 760 aaPredicted RBP37.18■■■■□ 3.54
CHAF1A-205ENST00000587580 ARHGEF12Q9NZN5 1544 aa37.18■■■■□ 3.54
CHAF1A-205ENST00000587580 CFDP1Q9UEE9 299 aaPredicted RBP37.15■■■■□ 3.54
CHAF1A-205ENST00000587580 MAP3K1Q13233 1512 aa37.15■■■■□ 3.54
CHAF1A-205ENST00000587580 AFAP1Q8N556 730 aa37.14■■■■□ 3.54
CHAF1A-205ENST00000587580 NCOA2Q15596 1464 aa37.13■■■■□ 3.54
CHAF1A-205ENST00000587580 LRRC9Q6ZRR7 1453 aa37.13■■■■□ 3.54
CHAF1A-205ENST00000587580 TRAPPC8Q9Y2L5 1435 aa37.13■■■■□ 3.53
CHAF1A-205ENST00000587580 HECW2Q9P2P5 1572 aa37.12■■■■□ 3.53
CHAF1A-205ENST00000587580 ARID4BQ4LE39 1312 aaPredicted RBP37.11■■■■□ 3.53
CHAF1A-205ENST00000587580 SYCP2Q9BX26 1530 aa37.11■■■■□ 3.53
CHAF1A-205ENST00000587580 BCORL1Q5H9F3 1711 aa37.08■■■■□ 3.53
CHAF1A-205ENST00000587580 PLEKHH2Q8IVE3 1493 aa37.07■■■■□ 3.52
CHAF1A-205ENST00000587580 SIGLEC1Q9BZZ2 1709 aa37.06■■■■□ 3.52
CHAF1A-205ENST00000587580 MYT1LQ9UL68 1186 aa37.05■■■■□ 3.52
CHAF1A-205ENST00000587580 ADAMTSL3P82987 1691 aa37.05■■■■□ 3.52
CHAF1A-205ENST00000587580 ATP10AO60312 1499 aa37.04■■■■□ 3.52
CHAF1A-205ENST00000587580 MLH3Q9UHC1 1453 aa37.03■■■■□ 3.52
CHAF1A-205ENST00000587580 C9orf84Q5VXU9 1444 aa37.02■■■■□ 3.52
CHAF1A-205ENST00000587580 KIAA1107Q9UPP5 1409 aa37.02■■■■□ 3.52
CHAF1A-205ENST00000587580 KANK4Q5T7N3 995 aaPredicted RBP37.01■■■■□ 3.52
CHAF1A-205ENST00000587580 DIP2CQ9Y2E4 1556 aa37■■■■□ 3.51
CHAF1A-205ENST00000587580 ABCA6Q8N139 1617 aa36.99■■■■□ 3.51
CHAF1A-205ENST00000587580 HNRNPMP52272 730 aaKnown RBP eCLIP36.99■■■■□ 3.51
CHAF1A-205ENST00000587580 APLP2Q06481 763 aa36.99■■■■□ 3.51
CHAF1A-205ENST00000587580 KIDINS220Q9ULH0 1771 aa36.96■■■■□ 3.51
CHAF1A-205ENST00000587580 MADDQ8WXG6 1647 aa36.96■■■■□ 3.51
CHAF1A-205ENST00000587580 ZNF644Q9H582 1327 aaPredicted RBP36.95■■■■□ 3.51
CHAF1A-205ENST00000587580 REREQ9P2R6 1566 aa36.9■■■■□ 3.5
CHAF1A-205ENST00000587580 CAMSAP2Q08AD1 1489 aa36.89■■■■□ 3.5
CHAF1A-205ENST00000587580 SPAG9O60271 1321 aaKnown RBP36.88■■■■□ 3.49
CHAF1A-205ENST00000587580 MBD5Q9P267 1494 aa36.87■■■■□ 3.49
CHAF1A-205ENST00000587580 INO80Q9ULG1 1556 aaPredicted RBP36.87■■■■□ 3.49
CHAF1A-205ENST00000587580 ATP7AQ04656 1500 aa36.86■■■■□ 3.49
CHAF1A-205ENST00000587580 PTPRMP28827 1452 aa36.86■■■■□ 3.49
CHAF1A-205ENST00000587580 RIMS1Q86UR5 1692 aaKnown RBP36.86■■■■□ 3.49
CHAF1A-205ENST00000587580 MLECQ14165 292 aa36.85■■■■□ 3.49
CHAF1A-205ENST00000587580 MYOM3Q5VTT5 1437 aa36.8■■■■□ 3.48
CHAF1A-205ENST00000587580 FER1L4A9Z1Z3 1794 aa36.8■■■■□ 3.48
CHAF1A-205ENST00000587580 CCDC141Q6ZP82 1450 aa36.77■■■■□ 3.48
CHAF1A-205ENST00000587580 AGLP35573 1532 aa36.76■■■■□ 3.48
CHAF1A-205ENST00000587580 MIA2Q96PC5 1412 aa36.74■■■■□ 3.47
CHAF1A-205ENST00000587580 ARHGEF5Q12774 1597 aa36.73■■■■□ 3.47
CHAF1A-205ENST00000587580 RTEL1-TNFRSF6BF6WH68 1400 aa36.68■■■■□ 3.46
CHAF1A-205ENST00000587580 ADGBQ8N7X0 1667 aa36.68■■■■□ 3.46
CHAF1A-205ENST00000587580 RSPH4AQ5TD94 716 aa36.68■■■■□ 3.46
CHAF1A-205ENST00000587580 A2MP01023 1474 aa36.67■■■■□ 3.46
CHAF1A-205ENST00000587580 PLXNC1O60486 1568 aa36.66■■■■□ 3.46
CHAF1A-205ENST00000587580 PTPN23Q9H3S7 1636 aa36.6■■■■□ 3.45
CHAF1A-205ENST00000587580 PLPPR3Q6T4P5 718 aa36.6■■■■□ 3.45
CHAF1A-205ENST00000587580 FGD6Q6ZV73 1430 aa36.57■■■■□ 3.44
CHAF1A-205ENST00000587580 TSPY4P0CV99 314 aa36.56■■■■□ 3.44
CHAF1A-205ENST00000587580 TSPY10P0CW01 314 aa36.56■■■■□ 3.44
CHAF1A-205ENST00000587580 MAST1Q9Y2H9 1570 aa36.53■■■■□ 3.44
CHAF1A-205ENST00000587580 ESF1Q9H501 851 aaKnown RBP36.5■■■■□ 3.43
CHAF1A-205ENST00000587580 DHX29Q7Z478 1369 aaKnown RBP36.5■■■■□ 3.43
CHAF1A-205ENST00000587580 TCOF1Q13428 1488 aaKnown RBP36.5■■■■□ 3.43
CHAF1A-205ENST00000587580 CROCC2H7BZ55 1655 aa36.46■■■■□ 3.43
CHAF1A-205ENST00000587580 CNTLNQ9NXG0 1405 aa36.45■■■■□ 3.43
CHAF1A-205ENST00000587580 CEBPAP49715 358 aaPredicted RBP36.44■■■■□ 3.42
CHAF1A-205ENST00000587580 C3P01024 1663 aa36.44■■■■□ 3.42
CHAF1A-205ENST00000587580 DNMT1P26358 1616 aaKnown RBP36.42■■■■□ 3.42
CHAF1A-205ENST00000587580 GGT6Q6P531 493 aa36.41■■■■□ 3.42
CHAF1A-205ENST00000587580 LMTK3Q96Q04 1460 aa36.41■■■■□ 3.42
CHAF1A-205ENST00000587580 SHANK2Q9UPX8 1470 aa36.41■■■■□ 3.42
CHAF1A-205ENST00000587580 ABCC5O15440 1437 aa36.41■■■■□ 3.42
CHAF1A-205ENST00000587580 MROH2AA6NES4 1674 aa36.39■■■■□ 3.42
CHAF1A-205ENST00000587580 DAPK1P53355 1430 aa36.39■■■■□ 3.42
CHAF1A-205ENST00000587580 CLTCQ00610 1675 aaKnown RBP36.39■■■■□ 3.42
CHAF1A-205ENST00000587580 KIF3BO15066 747 aa36.34■■■■□ 3.41
CHAF1A-205ENST00000587580 PREX1Q8TCU6 1659 aa36.33■■■■□ 3.41
CHAF1A-205ENST00000587580 PPARGC1BQ86YN6 1023 aaKnown RBP36.3■■■■□ 3.4
CHAF1A-205ENST00000587580 FAM50AQ14320 339 aaKnown RBP36.29■■■■□ 3.4
CHAF1A-205ENST00000587580 PPP6R1Q9UPN7 881 aa36.29■■■■□ 3.4
CHAF1A-205ENST00000587580 DUOX2Q9NRD8 1548 aa36.28■■■■□ 3.4
CHAF1A-205ENST00000587580 ZMYM3Q14202 1370 aa36.27■■■■□ 3.4
CHAF1A-205ENST00000587580 EIF2AK4Q9P2K8 1649 aaKnown RBP36.27■■■■□ 3.4
CHAF1A-205ENST00000587580 KIF15Q9NS87 1388 aa36.25■■■■□ 3.39
CHAF1A-205ENST00000587580 SETD1BQ9UPS6 1966 aaKnown RBP36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms