RNA–Protein interactions for RNA: ENST00000587463.5

RANBP3-210, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-210ENST00000587463 CDC42BPBQ9Y5S2 1711 aa29.56■■■□□ 2.32
RANBP3-210ENST00000587463 ARHGAP5Q13017 1502 aa29.55■■■□□ 2.32
RANBP3-210ENST00000587463 POGZQ7Z3K3 1410 aa29.55■■■□□ 2.32
RANBP3-210ENST00000587463 PREX2Q70Z35 1606 aa29.55■■■□□ 2.32
RANBP3-210ENST00000587463 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
RANBP3-210ENST00000587463 MAGI2Q86UL8 1455 aa29.52■■■□□ 2.32
RANBP3-210ENST00000587463 CDC42BPAQ5VT25 1732 aa29.5■■■□□ 2.31
RANBP3-210ENST00000587463 ZFYVE16Q7Z3T8 1539 aa29.46■■■□□ 2.31
RANBP3-210ENST00000587463 ZNF518AQ6AHZ1 1483 aa29.44■■■□□ 2.3
RANBP3-210ENST00000587463 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
RANBP3-210ENST00000587463 GPATCH8Q9UKJ3 1502 aaKnown RBP29.43■■■□□ 2.3
RANBP3-210ENST00000587463 VPS8Q8N3P4 1428 aa29.42■■■□□ 2.3
RANBP3-210ENST00000587463 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
RANBP3-210ENST00000587463 KDM5CP41229 1560 aa29.42■■■□□ 2.3
RANBP3-210ENST00000587463 ABCC1P33527 1531 aa29.41■■■□□ 2.3
RANBP3-210ENST00000587463 EHBP1L1Q8N3D4 1523 aa29.41■■■□□ 2.3
RANBP3-210ENST00000587463 ADAMTSL3P82987 1691 aa29.4■■■□□ 2.3
RANBP3-210ENST00000587463 BCORL1Q5H9F3 1711 aa29.38■■■□□ 2.29
RANBP3-210ENST00000587463 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
RANBP3-210ENST00000587463 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
RANBP3-210ENST00000587463 AFAP1Q8N556 730 aa29.35■■■□□ 2.29
RANBP3-210ENST00000587463 CCNB3Q8WWL7 1395 aa29.33■■■□□ 2.29
RANBP3-210ENST00000587463 TIAM1Q13009 1591 aa29.33■■■□□ 2.29
RANBP3-210ENST00000587463 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
RANBP3-210ENST00000587463 SIGLEC1Q9BZZ2 1709 aa29.33■■■□□ 2.29
RANBP3-210ENST00000587463 ATP10AO60312 1499 aa29.32■■■□□ 2.28
RANBP3-210ENST00000587463 ARID4BQ4LE39 1312 aaPredicted RBP29.32■■■□□ 2.28
RANBP3-210ENST00000587463 HECW2Q9P2P5 1572 aa29.31■■■□□ 2.28
RANBP3-210ENST00000587463 MLH3Q9UHC1 1453 aa29.31■■■□□ 2.28
RANBP3-210ENST00000587463 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
RANBP3-210ENST00000587463 C9orf84Q5VXU9 1444 aa29.28■■■□□ 2.28
RANBP3-210ENST00000587463 KIAA1107Q9UPP5 1409 aa29.28■■■□□ 2.28
RANBP3-210ENST00000587463 MAP3K1Q13233 1512 aa29.27■■■□□ 2.28
RANBP3-210ENST00000587463 CFDP1Q9UEE9 299 aaPredicted RBP29.27■■■□□ 2.28
RANBP3-210ENST00000587463 PLEKHH2Q8IVE3 1493 aa29.26■■■□□ 2.27
RANBP3-210ENST00000587463 MADDQ8WXG6 1647 aa29.25■■■□□ 2.27
RANBP3-210ENST00000587463 SUPT6HQ7KZ85 1726 aaKnown RBP29.25■■■□□ 2.27
RANBP3-210ENST00000587463 PTPRMP28827 1452 aa29.24■■■□□ 2.27
RANBP3-210ENST00000587463 REREQ9P2R6 1566 aa29.24■■■□□ 2.27
RANBP3-210ENST00000587463 ZNF777Q9ULD5 760 aaPredicted RBP29.24■■■□□ 2.27
RANBP3-210ENST00000587463 DIP2CQ9Y2E4 1556 aa29.24■■■□□ 2.27
RANBP3-210ENST00000587463 SYCP2Q9BX26 1530 aa29.24■■■□□ 2.27
RANBP3-210ENST00000587463 NCOA2Q15596 1464 aa29.22■■■□□ 2.27
RANBP3-210ENST00000587463 ABCA6Q8N139 1617 aa29.21■■■□□ 2.27
RANBP3-210ENST00000587463 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
RANBP3-210ENST00000587463 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.26
RANBP3-210ENST00000587463 HNRNPMP52272 730 aaKnown RBP eCLIP29.17■■■□□ 2.267e-7■■■□□ 15.5
RANBP3-210ENST00000587463 RIMS1Q86UR5 1692 aaKnown RBP29.15■■■□□ 2.26
RANBP3-210ENST00000587463 MYT1LQ9UL68 1186 aa29.14■■■□□ 2.26
RANBP3-210ENST00000587463 AGLP35573 1532 aa29.12■■■□□ 2.25
RANBP3-210ENST00000587463 MBD5Q9P267 1494 aa29.11■■■□□ 2.25
RANBP3-210ENST00000587463 SPAG9O60271 1321 aaKnown RBP29.11■■■□□ 2.25
RANBP3-210ENST00000587463 ZNF644Q9H582 1327 aaPredicted RBP29.11■■■□□ 2.25
RANBP3-210ENST00000587463 INO80Q9ULG1 1556 aaPredicted RBP29.1■■■□□ 2.25
RANBP3-210ENST00000587463 FER1L4A9Z1Z3 1794 aa29.1■■■□□ 2.25
RANBP3-210ENST00000587463 KANK4Q5T7N3 995 aaPredicted RBP29.09■■■□□ 2.25
RANBP3-210ENST00000587463 ATP7AQ04656 1500 aa29.08■■■□□ 2.25
RANBP3-210ENST00000587463 MLECQ14165 292 aa29.07■■■□□ 2.24
RANBP3-210ENST00000587463 CAMSAP2Q08AD1 1489 aa29.04■■■□□ 2.24
RANBP3-210ENST00000587463 RTEL1-TNFRSF6BF6WH68 1400 aa29■■■□□ 2.23
RANBP3-210ENST00000587463 RSPH4AQ5TD94 716 aa28.99■■■□□ 2.23
RANBP3-210ENST00000587463 PLXNC1O60486 1568 aa28.99■■■□□ 2.23
RANBP3-210ENST00000587463 CCDC141Q6ZP82 1450 aa28.97■■■□□ 2.23
RANBP3-210ENST00000587463 ARHGEF5Q12774 1597 aa28.97■■■□□ 2.23
RANBP3-210ENST00000587463 APLP2Q06481 763 aa28.97■■■□□ 2.23
RANBP3-210ENST00000587463 A2MP01023 1474 aa28.96■■■□□ 2.23
RANBP3-210ENST00000587463 ADGBQ8N7X0 1667 aa28.96■■■□□ 2.23
RANBP3-210ENST00000587463 MYOM3Q5VTT5 1437 aa28.95■■■□□ 2.23
RANBP3-210ENST00000587463 MIA2Q96PC5 1412 aa28.95■■■□□ 2.23
RANBP3-210ENST00000587463 LMTK3Q96Q04 1460 aa28.91■■■□□ 2.22
RANBP3-210ENST00000587463 CNTLNQ9NXG0 1405 aa28.86■■■□□ 2.21
RANBP3-210ENST00000587463 DHX29Q7Z478 1369 aaKnown RBP28.84■■■□□ 2.21
RANBP3-210ENST00000587463 PLPPR3Q6T4P5 718 aa28.83■■■□□ 2.21
RANBP3-210ENST00000587463 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
RANBP3-210ENST00000587463 C3P01024 1663 aa28.83■■■□□ 2.21
RANBP3-210ENST00000587463 CEBPAP49715 358 aaPredicted RBP28.82■■■□□ 2.2
RANBP3-210ENST00000587463 MROH2AA6NES4 1674 aa28.81■■■□□ 2.2
RANBP3-210ENST00000587463 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
RANBP3-210ENST00000587463 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
RANBP3-210ENST00000587463 ESF1Q9H501 851 aaKnown RBP28.81■■■□□ 2.2
RANBP3-210ENST00000587463 PREX1Q8TCU6 1659 aa28.79■■■□□ 2.2
RANBP3-210ENST00000587463 PPP6R1Q9UPN7 881 aa28.78■■■□□ 2.2
RANBP3-210ENST00000587463 PTPN23Q9H3S7 1636 aa28.77■■■□□ 2.2
RANBP3-210ENST00000587463 SETD1BQ9UPS6 1966 aaKnown RBP28.77■■■□□ 2.2
RANBP3-210ENST00000587463 TCOF1Q13428 1488 aaKnown RBP28.75■■■□□ 2.19
RANBP3-210ENST00000587463 FGD6Q6ZV73 1430 aa28.75■■■□□ 2.19
RANBP3-210ENST00000587463 GGT6Q6P531 493 aa28.72■■■□□ 2.19
RANBP3-210ENST00000587463 CLTCQ00610 1675 aaKnown RBP28.72■■■□□ 2.19
RANBP3-210ENST00000587463 ZMYM3Q14202 1370 aa28.71■■■□□ 2.19
RANBP3-210ENST00000587463 SHANK2Q9UPX8 1470 aa28.7■■■□□ 2.18
RANBP3-210ENST00000587463 CROCC2H7BZ55 1655 aa28.69■■■□□ 2.18
RANBP3-210ENST00000587463 FAM135AQ9P2D6 1515 aa28.69■■■□□ 2.18
RANBP3-210ENST00000587463 NPATQ14207 1427 aa28.69■■■□□ 2.18
RANBP3-210ENST00000587463 ABCC5O15440 1437 aa28.68■■■□□ 2.18
RANBP3-210ENST00000587463 HSPA2P54652 639 aa28.67■■■□□ 2.18
RANBP3-210ENST00000587463 UHRF1BP1Q6BDS2 1440 aa28.67■■■□□ 2.18
RANBP3-210ENST00000587463 DNMT1P26358 1616 aaKnown RBP28.66■■■□□ 2.18
RANBP3-210ENST00000587463 KIF3BO15066 747 aa28.66■■■□□ 2.18
RANBP3-210ENST00000587463 DAPK1P53355 1430 aa28.63■■■□□ 2.17
RANBP3-210ENST00000587463 EIF2AK4Q9P2K8 1649 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms