RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
TCF3-211ENST00000587425 PCF11O94913 1555 aaKnown RBP24.98■■□□□ 1.59
TCF3-211ENST00000587425 TROQ12816 1431 aaPredicted RBP24.97■■□□□ 1.59
TCF3-211ENST00000587425 POGZQ7Z3K3 1410 aa24.96■■□□□ 1.59
TCF3-211ENST00000587425 RIMS1Q86UR5 1692 aaKnown RBP24.96■■□□□ 1.59
TCF3-211ENST00000587425 PLPPR3Q6T4P5 718 aa24.95■■□□□ 1.58
TCF3-211ENST00000587425 ILDR1Q86SU0 546 aaPredicted RBP24.95■■□□□ 1.58
TCF3-211ENST00000587425 EFCAB2Q5VUJ9 269 aa24.93■■□□□ 1.58
TCF3-211ENST00000587425 CLIP1P30622 1438 aa24.93■■□□□ 1.58
TCF3-211ENST00000587425 ARHGAP5Q13017 1502 aa24.92■■□□□ 1.58
TCF3-211ENST00000587425 MLECQ14165 292 aa24.91■■□□□ 1.58
TCF3-211ENST00000587425 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
TCF3-211ENST00000587425 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.57
TCF3-211ENST00000587425 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
TCF3-211ENST00000587425 CCDC18Q5T9S5 1454 aa24.84■■□□□ 1.57
TCF3-211ENST00000587425 AFAP1Q8N556 730 aa24.84■■□□□ 1.57
TCF3-211ENST00000587425 ATP10AO60312 1499 aa24.82■■□□□ 1.56
TCF3-211ENST00000587425 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
TCF3-211ENST00000587425 MYT1LQ9UL68 1186 aa24.81■■□□□ 1.56
TCF3-211ENST00000587425 ZNF518AQ6AHZ1 1483 aa24.81■■□□□ 1.56
TCF3-211ENST00000587425 LMTK3Q96Q04 1460 aa24.81■■□□□ 1.56
TCF3-211ENST00000587425 PREX2Q70Z35 1606 aa24.8■■□□□ 1.56
TCF3-211ENST00000587425 FYCO1Q9BQS8 1478 aa24.8■■□□□ 1.56
TCF3-211ENST00000587425 C9orf84Q5VXU9 1444 aa24.79■■□□□ 1.56
TCF3-211ENST00000587425 KDM5CP41229 1560 aa24.77■■□□□ 1.56
TCF3-211ENST00000587425 ARHGEF12Q9NZN5 1544 aa24.76■■□□□ 1.55
TCF3-211ENST00000587425 CDC42BPAQ5VT25 1732 aa24.75■■□□□ 1.55
TCF3-211ENST00000587425 HSPA2P54652 639 aa24.75■■□□□ 1.55
TCF3-211ENST00000587425 ABCC1P33527 1531 aa24.75■■□□□ 1.55
TCF3-211ENST00000587425 TRAPPC8Q9Y2L5 1435 aa24.74■■□□□ 1.55
TCF3-211ENST00000587425 DIP2CQ9Y2E4 1556 aa24.73■■□□□ 1.55
TCF3-211ENST00000587425 ITSN2Q9NZM3 1697 aa24.72■■□□□ 1.55
TCF3-211ENST00000587425 ABCA6Q8N139 1617 aa24.72■■□□□ 1.55
TCF3-211ENST00000587425 ZNF777Q9ULD5 760 aaPredicted RBP24.7■■□□□ 1.54
TCF3-211ENST00000587425 CEBPAP49715 358 aaPredicted RBP24.69■■□□□ 1.54
TCF3-211ENST00000587425 MLH3Q9UHC1 1453 aa24.65■■□□□ 1.54
TCF3-211ENST00000587425 SAMD9LQ8IVG5 1584 aa24.65■■□□□ 1.54
TCF3-211ENST00000587425 GPATCH8Q9UKJ3 1502 aaKnown RBP24.64■■□□□ 1.53
TCF3-211ENST00000587425 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
TCF3-211ENST00000587425 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
TCF3-211ENST00000587425 REREQ9P2R6 1566 aa24.6■■□□□ 1.53
TCF3-211ENST00000587425 HNRNPMP52272 730 aaKnown RBP eCLIP24.6■■□□□ 1.53
TCF3-211ENST00000587425 MTUS2Q5JR59 1369 aa24.59■■□□□ 1.53
TCF3-211ENST00000587425 CEP162Q5TB80 1403 aa24.59■■□□□ 1.53
TCF3-211ENST00000587425 PREX1Q8TCU6 1659 aa24.56■■□□□ 1.52
TCF3-211ENST00000587425 CCNB3Q8WWL7 1395 aa24.56■■□□□ 1.52
TCF3-211ENST00000587425 CFDP1Q9UEE9 299 aaPredicted RBP24.55■■□□□ 1.52
TCF3-211ENST00000587425 AGLP35573 1532 aa24.54■■□□□ 1.52
TCF3-211ENST00000587425 SPAG9O60271 1321 aaKnown RBP24.53■■□□□ 1.52
TCF3-211ENST00000587425 C3P01024 1663 aa24.53■■□□□ 1.52
TCF3-211ENST00000587425 FBXO41Q8TF61 875 aa24.52■■□□□ 1.52
TCF3-211ENST00000587425 ZNF644Q9H582 1327 aaPredicted RBP24.5■■□□□ 1.51
TCF3-211ENST00000587425 TIAM1Q13009 1591 aa24.5■■□□□ 1.51
TCF3-211ENST00000587425 SUPT6HQ7KZ85 1726 aaKnown RBP24.49■■□□□ 1.51
TCF3-211ENST00000587425 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
TCF3-211ENST00000587425 EHBP1L1Q8N3D4 1523 aa24.49■■□□□ 1.51
TCF3-211ENST00000587425 ATP7AQ04656 1500 aa24.48■■□□□ 1.51
TCF3-211ENST00000587425 UHRF1BP1Q6BDS2 1440 aa24.46■■□□□ 1.51
TCF3-211ENST00000587425 KIAA1107Q9UPP5 1409 aa24.46■■□□□ 1.51
TCF3-211ENST00000587425 INO80Q9ULG1 1556 aaPredicted RBP24.46■■□□□ 1.51
TCF3-211ENST00000587425 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.51
TCF3-211ENST00000587425 LOC105371045A0A1W2PR82 267 aa24.45■■□□□ 1.5
TCF3-211ENST00000587425 STRCQ7RTU9 1775 aa24.42■■□□□ 1.5
TCF3-211ENST00000587425 SETD1BQ9UPS6 1966 aaKnown RBP24.41■■□□□ 1.5
TCF3-211ENST00000587425 A2MP01023 1474 aa24.4■■□□□ 1.5
TCF3-211ENST00000587425 PLXNC1O60486 1568 aa24.38■■□□□ 1.49
TCF3-211ENST00000587425 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
TCF3-211ENST00000587425 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
TCF3-211ENST00000587425 MBD5Q9P267 1494 aa24.37■■□□□ 1.49
TCF3-211ENST00000587425 CLTCQ00610 1675 aaKnown RBP24.37■■□□□ 1.49
TCF3-211ENST00000587425 GGT6Q6P531 493 aa24.35■■□□□ 1.49
TCF3-211ENST00000587425 CERKQ8TCT0 537 aa24.34■■□□□ 1.49
TCF3-211ENST00000587425 MROH2AA6NES4 1674 aa24.34■■□□□ 1.49
TCF3-211ENST00000587425 ZMYM3Q14202 1370 aa24.33■■□□□ 1.49
TCF3-211ENST00000587425 ADGBQ8N7X0 1667 aa24.33■■□□□ 1.49
TCF3-211ENST00000587425 CAMSAP2Q08AD1 1489 aa24.31■■□□□ 1.48
TCF3-211ENST00000587425 VPS8Q8N3P4 1428 aa24.29■■□□□ 1.48
TCF3-211ENST00000587425 NPATQ14207 1427 aa24.27■■□□□ 1.48
TCF3-211ENST00000587425 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
TCF3-211ENST00000587425 DMRT2Q9Y5R5 561 aa24.26■■□□□ 1.47
TCF3-211ENST00000587425 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
TCF3-211ENST00000587425 LRRC9Q6ZRR7 1453 aa24.24■■□□□ 1.47
TCF3-211ENST00000587425 NCOA1Q15788 1441 aa24.23■■□□□ 1.47
TCF3-211ENST00000587425 CAMSAP1Q5T5Y3 1602 aa24.23■■□□□ 1.47
TCF3-211ENST00000587425 MYO3AQ8NEV4 1616 aa24.22■■□□□ 1.47
TCF3-211ENST00000587425 PTPRKQ15262 1439 aa24.22■■□□□ 1.47
TCF3-211ENST00000587425 DHX29Q7Z478 1369 aaKnown RBP24.22■■□□□ 1.47
TCF3-211ENST00000587425 KANK4Q5T7N3 995 aaPredicted RBP24.22■■□□□ 1.47
TCF3-211ENST00000587425 PTPRTO14522 1441 aa24.2■■□□□ 1.46
TCF3-211ENST00000587425 KIF3BO15066 747 aa24.2■■□□□ 1.46
TCF3-211ENST00000587425 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
TCF3-211ENST00000587425 ARHGEF5Q12774 1597 aa24.16■■□□□ 1.46
TCF3-211ENST00000587425 CEP170BQ9Y4F5 1589 aaPredicted RBP24.16■■□□□ 1.46
TCF3-211ENST00000587425 ZNF142P52746 1687 aaPredicted RBP24.15■■□□□ 1.46
TCF3-211ENST00000587425 PPP6R1Q9UPN7 881 aa24.13■■□□□ 1.45
TCF3-211ENST00000587425 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
TCF3-211ENST00000587425 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
TCF3-211ENST00000587425 RSPH4AQ5TD94 716 aa24.12■■□□□ 1.45
TCF3-211ENST00000587425 FBXO31Q5XUX0 539 aaPredicted RBP24.12■■□□□ 1.45
TCF3-211ENST00000587425 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms