RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 AEBP2Q6ZN18 517 aaPredicted RBP17.53■□□□□ 0.4
PTPRS-204ENST00000587303 G3V3G9 751 aa17.52■□□□□ 0.39
PTPRS-204ENST00000587303 DCAF8Q5TAQ9 597 aa17.52■□□□□ 0.39
PTPRS-204ENST00000587303 GOLGA6L6A8MZA4 724 aa17.5■□□□□ 0.39
PTPRS-204ENST00000587303 EEA1Q15075 1411 aa17.48■□□□□ 0.39
PTPRS-204ENST00000587303 GOLGA6L4A6NEF3 574 aa17.47■□□□□ 0.39
PTPRS-204ENST00000587303 FOXD1Q16676 465 aa17.47■□□□□ 0.39
PTPRS-204ENST00000587303 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
PTPRS-204ENST00000587303 GNL2Q13823 731 aaKnown RBP17.47■□□□□ 0.39
PTPRS-204ENST00000587303 ARID3AQ99856 593 aa17.47■□□□□ 0.39
PTPRS-204ENST00000587303 EID1Q9Y6B2 187 aa17.46■□□□□ 0.39
PTPRS-204ENST00000587303 DRC7Q8IY82 874 aa17.46■□□□□ 0.39
PTPRS-204ENST00000587303 APBB1O00213 710 aa17.45■□□□□ 0.38
PTPRS-204ENST00000587303 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
PTPRS-204ENST00000587303 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
PTPRS-204ENST00000587303 MCCP23508 829 aa17.42■□□□□ 0.38
PTPRS-204ENST00000587303 TAF7LQ5H9L4 462 aa17.41■□□□□ 0.38
PTPRS-204ENST00000587303 GORABQ5T7V8 394 aa17.4■□□□□ 0.38
PTPRS-204ENST00000587303 B4GALNT3Q6L9W6 998 aa17.4■□□□□ 0.38
PTPRS-204ENST00000587303 CARMIL2Q6F5E8 1435 aa17.4■□□□□ 0.38
PTPRS-204ENST00000587303 NRDCO43847 1150 aa17.39■□□□□ 0.37
PTPRS-204ENST00000587303 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
PTPRS-204ENST00000587303 NGDNQ8NEJ9 315 aaKnown RBP17.39■□□□□ 0.37
PTPRS-204ENST00000587303 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
PTPRS-204ENST00000587303 CUX2O14529 1486 aa17.37■□□□□ 0.37
PTPRS-204ENST00000587303 NUTM2DQ5VT03 806 aaPredicted RBP17.37■□□□□ 0.37
PTPRS-204ENST00000587303 MSH5O43196 834 aa17.37■□□□□ 0.37
PTPRS-204ENST00000587303 CARMIL1Q5VZK9 1371 aa17.37■□□□□ 0.37
PTPRS-204ENST00000587303 EFCAB2Q5VUJ9 269 aa17.36■□□□□ 0.37
PTPRS-204ENST00000587303 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
PTPRS-204ENST00000587303 KIAA1211Q6ZU35 1233 aa17.35■□□□□ 0.37
PTPRS-204ENST00000587303 FHAD1B1AJZ9 1412 aa17.35■□□□□ 0.37
PTPRS-204ENST00000587303 NACADO15069 1562 aa17.34■□□□□ 0.37
PTPRS-204ENST00000587303 NUTM2FA1L443 756 aa17.34■□□□□ 0.37
PTPRS-204ENST00000587303 PKD2Q13563 968 aa17.34■□□□□ 0.37
PTPRS-204ENST00000587303 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
PTPRS-204ENST00000587303 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.372e-6■■■■□ 20
PTPRS-204ENST00000587303 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
PTPRS-204ENST00000587303 FBXO3Q9UK99 471 aa17.33■□□□□ 0.37
PTPRS-204ENST00000587303 KIF3BO15066 747 aa17.33■□□□□ 0.36
PTPRS-204ENST00000587303 MEX3CQ5U5Q3 659 aaKnown RBP17.33■□□□□ 0.36
PTPRS-204ENST00000587303 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
PTPRS-204ENST00000587303 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
PTPRS-204ENST00000587303 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
PTPRS-204ENST00000587303 CALD1Q05682 793 aaKnown RBP17.31■□□□□ 0.36
PTPRS-204ENST00000587303 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
PTPRS-204ENST00000587303 STK31Q9BXU1 1019 aa17.3■□□□□ 0.36
PTPRS-204ENST00000587303 AMPHP49418 695 aa17.3■□□□□ 0.36
PTPRS-204ENST00000587303 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
PTPRS-204ENST00000587303 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
PTPRS-204ENST00000587303 EVA1CP58658 441 aa17.29■□□□□ 0.36
PTPRS-204ENST00000587303 WASHC2CQ9Y4E1 1318 aa17.29■□□□□ 0.36
PTPRS-204ENST00000587303 SOGA1O94964 1423 aa17.29■□□□□ 0.36
PTPRS-204ENST00000587303 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
PTPRS-204ENST00000587303 CREBRFQ8IUR6 639 aa17.27■□□□□ 0.36
PTPRS-204ENST00000587303 MSNP26038 577 aaKnown RBP17.26■□□□□ 0.35
PTPRS-204ENST00000587303 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
PTPRS-204ENST00000587303 CHMP4AQ9BY43 222 aa17.26■□□□□ 0.35
PTPRS-204ENST00000587303 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
PTPRS-204ENST00000587303 HSPA5P11021 654 aaKnown RBP17.25■□□□□ 0.35
PTPRS-204ENST00000587303 WWC1Q8IX03 1113 aa17.25■□□□□ 0.35
PTPRS-204ENST00000587303 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
PTPRS-204ENST00000587303 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
PTPRS-204ENST00000587303 ITPRIPQ8IWB1 547 aa17.25■□□□□ 0.35
PTPRS-204ENST00000587303 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
PTPRS-204ENST00000587303 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
PTPRS-204ENST00000587303 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
PTPRS-204ENST00000587303 TERF2IPQ9NYB0 399 aa17.24■□□□□ 0.35
PTPRS-204ENST00000587303 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
PTPRS-204ENST00000587303 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
PTPRS-204ENST00000587303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.23■□□□□ 0.35
PTPRS-204ENST00000587303 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
PTPRS-204ENST00000587303 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
PTPRS-204ENST00000587303 NOP58Q9Y2X3 529 aaKnown RBP17.22■□□□□ 0.35
PTPRS-204ENST00000587303 KLHL34Q8N239 644 aa17.22■□□□□ 0.35
PTPRS-204ENST00000587303 NUP155O75694 1391 aa17.22■□□□□ 0.35
PTPRS-204ENST00000587303 CYB5RLQ6IPT4 315 aa17.22■□□□□ 0.35
PTPRS-204ENST00000587303 SLC4A10Q6U841 1118 aa17.21■□□□□ 0.35
PTPRS-204ENST00000587303 TOMM22Q9NS69 142 aa17.21■□□□□ 0.35
PTPRS-204ENST00000587303 A0A0U1RQG5 324 aaPredicted RBP17.21■□□□□ 0.35
PTPRS-204ENST00000587303 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
PTPRS-204ENST00000587303 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
PTPRS-204ENST00000587303 HNRNPMP52272 730 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRS-204ENST00000587303 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.34
PTPRS-204ENST00000587303 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
PTPRS-204ENST00000587303 TDRD9Q8NDG6 1382 aaKnown RBP17.19■□□□□ 0.34
PTPRS-204ENST00000587303 EIF3AQ14152 1382 aaKnown RBP17.19■□□□□ 0.34
PTPRS-204ENST00000587303 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
PTPRS-204ENST00000587303 HDAC5Q9UQL6 1122 aa17.17■□□□□ 0.34
PTPRS-204ENST00000587303 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
PTPRS-204ENST00000587303 MARCH6O60337 910 aa17.17■□□□□ 0.34
PTPRS-204ENST00000587303 NOL8Q76FK4 1167 aaKnown RBP17.17■□□□□ 0.34
PTPRS-204ENST00000587303 ANKRD30AQ9BXX3 1397 aa17.16■□□□□ 0.34
PTPRS-204ENST00000587303 CCDC146Q8IYE0 955 aa17.15■□□□□ 0.34
PTPRS-204ENST00000587303 BAZ1AQ9NRL2 1556 aaPredicted RBP17.14■□□□□ 0.33
PTPRS-204ENST00000587303 SYTL4Q96C24 671 aaPredicted RBP17.13■□□□□ 0.33
PTPRS-204ENST00000587303 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
PTPRS-204ENST00000587303 DCAF8L1A6NGE4 600 aa17.12■□□□□ 0.33
PTPRS-204ENST00000587303 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
PTPRS-204ENST00000587303 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms