RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 PCF11O94913 1555 aaKnown RBP25.02■■□□□ 1.6
PRKCSH-204ENST00000587290 ILDR1Q86SU0 546 aaPredicted RBP25.01■■□□□ 1.59
PRKCSH-204ENST00000587290 SCAPERQ9BY12 1400 aa25.01■■□□□ 1.59
PRKCSH-204ENST00000587290 POGZQ7Z3K3 1410 aa25■■□□□ 1.59
PRKCSH-204ENST00000587290 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
PRKCSH-204ENST00000587290 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
PRKCSH-204ENST00000587290 CDC42BPBQ9Y5S2 1711 aa24.94■■□□□ 1.58
PRKCSH-204ENST00000587290 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
PRKCSH-204ENST00000587290 CDK11AQ9UQ88 783 aaPredicted RBP24.93■■□□□ 1.58
PRKCSH-204ENST00000587290 MAGI2Q86UL8 1455 aa24.92■■□□□ 1.58
PRKCSH-204ENST00000587290 CLIP1P30622 1438 aa24.92■■□□□ 1.58
PRKCSH-204ENST00000587290 FER1L4A9Z1Z3 1794 aa24.92■■□□□ 1.58
PRKCSH-204ENST00000587290 EFCAB2Q5VUJ9 269 aa24.91■■□□□ 1.58
PRKCSH-204ENST00000587290 MLECQ14165 292 aa24.9■■□□□ 1.58
PRKCSH-204ENST00000587290 CASKIN1Q8WXD9 1431 aa24.89■■□□□ 1.58
PRKCSH-204ENST00000587290 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.57
PRKCSH-204ENST00000587290 PREX2Q70Z35 1606 aa24.87■■□□□ 1.57
PRKCSH-204ENST00000587290 CCDC18Q5T9S5 1454 aa24.86■■□□□ 1.57
PRKCSH-204ENST00000587290 KDM5CP41229 1560 aa24.84■■□□□ 1.57
PRKCSH-204ENST00000587290 CDC42BPAQ5VT25 1732 aa24.84■■□□□ 1.57
PRKCSH-204ENST00000587290 ATP10AO60312 1499 aa24.83■■□□□ 1.57
PRKCSH-204ENST00000587290 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.57
PRKCSH-204ENST00000587290 C9orf84Q5VXU9 1444 aa24.82■■□□□ 1.56
PRKCSH-204ENST00000587290 AFAP1Q8N556 730 aa24.82■■□□□ 1.56
PRKCSH-204ENST00000587290 FYCO1Q9BQS8 1478 aa24.82■■□□□ 1.56
PRKCSH-204ENST00000587290 ITSN2Q9NZM3 1697 aa24.8■■□□□ 1.56
PRKCSH-204ENST00000587290 ABCC1P33527 1531 aa24.8■■□□□ 1.56
PRKCSH-204ENST00000587290 DIP2CQ9Y2E4 1556 aa24.8■■□□□ 1.56
PRKCSH-204ENST00000587290 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
PRKCSH-204ENST00000587290 ARHGEF12Q9NZN5 1544 aa24.79■■□□□ 1.56
PRKCSH-204ENST00000587290 HSPA2P54652 639 aa24.77■■□□□ 1.56
PRKCSH-204ENST00000587290 TRAPPC8Q9Y2L5 1435 aa24.77■■□□□ 1.56
PRKCSH-204ENST00000587290 MYT1LQ9UL68 1186 aa24.75■■□□□ 1.55
PRKCSH-204ENST00000587290 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.55
PRKCSH-204ENST00000587290 SAMD9LQ8IVG5 1584 aa24.7■■□□□ 1.54
PRKCSH-204ENST00000587290 CEBPAP49715 358 aaPredicted RBP24.69■■□□□ 1.54
PRKCSH-204ENST00000587290 MLH3Q9UHC1 1453 aa24.68■■□□□ 1.54
PRKCSH-204ENST00000587290 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
PRKCSH-204ENST00000587290 SYCP2Q9BX26 1530 aa24.66■■□□□ 1.54
PRKCSH-204ENST00000587290 PREX1Q8TCU6 1659 aa24.66■■□□□ 1.54
PRKCSH-204ENST00000587290 ZNF777Q9ULD5 760 aaPredicted RBP24.66■■□□□ 1.54
PRKCSH-204ENST00000587290 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
PRKCSH-204ENST00000587290 C3P01024 1663 aa24.62■■□□□ 1.53
PRKCSH-204ENST00000587290 AGLP35573 1532 aa24.58■■□□□ 1.53
PRKCSH-204ENST00000587290 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.52
PRKCSH-204ENST00000587290 MTUS2Q5JR59 1369 aa24.56■■□□□ 1.52
PRKCSH-204ENST00000587290 SUPT6HQ7KZ85 1726 aaKnown RBP24.56■■□□□ 1.52
PRKCSH-204ENST00000587290 FBXO41Q8TF61 875 aa24.56■■□□□ 1.52
PRKCSH-204ENST00000587290 CEP162Q5TB80 1403 aa24.55■■□□□ 1.52
PRKCSH-204ENST00000587290 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
PRKCSH-204ENST00000587290 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
PRKCSH-204ENST00000587290 INO80Q9ULG1 1556 aaPredicted RBP24.53■■□□□ 1.52
PRKCSH-204ENST00000587290 STRCQ7RTU9 1775 aa24.52■■□□□ 1.52
PRKCSH-204ENST00000587290 ATP7AQ04656 1500 aa24.52■■□□□ 1.52
PRKCSH-204ENST00000587290 CFDP1Q9UEE9 299 aaPredicted RBP24.52■■□□□ 1.52
PRKCSH-204ENST00000587290 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
PRKCSH-204ENST00000587290 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
PRKCSH-204ENST00000587290 SPAG9O60271 1321 aaKnown RBP24.5■■□□□ 1.51
PRKCSH-204ENST00000587290 UHRF1BP1Q6BDS2 1440 aa24.49■■□□□ 1.51
PRKCSH-204ENST00000587290 ZNF644Q9H582 1327 aaPredicted RBP24.48■■□□□ 1.51
PRKCSH-204ENST00000587290 KIAA1107Q9UPP5 1409 aa24.46■■□□□ 1.51
PRKCSH-204ENST00000587290 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
PRKCSH-204ENST00000587290 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.51
PRKCSH-204ENST00000587290 ESF1Q9H501 851 aaKnown RBP24.45■■□□□ 1.5
PRKCSH-204ENST00000587290 CLTCQ00610 1675 aaKnown RBP24.44■■□□□ 1.5
PRKCSH-204ENST00000587290 MROH2AA6NES4 1674 aa24.43■■□□□ 1.5
PRKCSH-204ENST00000587290 A2MP01023 1474 aa24.41■■□□□ 1.5
PRKCSH-204ENST00000587290 CNTLNQ9NXG0 1405 aa24.4■■□□□ 1.5
PRKCSH-204ENST00000587290 ADGBQ8N7X0 1667 aa24.4■■□□□ 1.5
PRKCSH-204ENST00000587290 MBD5Q9P267 1494 aa24.38■■□□□ 1.49
PRKCSH-204ENST00000587290 NCOA2Q15596 1464 aa24.37■■□□□ 1.49
PRKCSH-204ENST00000587290 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
PRKCSH-204ENST00000587290 CERKQ8TCT0 537 aa24.36■■□□□ 1.49
PRKCSH-204ENST00000587290 ZMYM3Q14202 1370 aa24.34■■□□□ 1.49
PRKCSH-204ENST00000587290 CAMSAP2Q08AD1 1489 aa24.32■■□□□ 1.48
PRKCSH-204ENST00000587290 GGT6Q6P531 493 aa24.32■■□□□ 1.48
PRKCSH-204ENST00000587290 MYO3AQ8NEV4 1616 aa24.31■■□□□ 1.48
PRKCSH-204ENST00000587290 NPATQ14207 1427 aa24.29■■□□□ 1.48
PRKCSH-204ENST00000587290 CAMSAP1Q5T5Y3 1602 aa24.28■■□□□ 1.48
PRKCSH-204ENST00000587290 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
PRKCSH-204ENST00000587290 CCDC141Q6ZP82 1450 aa24.27■■□□□ 1.48
PRKCSH-204ENST00000587290 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
PRKCSH-204ENST00000587290 ZNF142P52746 1687 aaPredicted RBP24.26■■□□□ 1.47
PRKCSH-204ENST00000587290 DMRT2Q9Y5R5 561 aa24.25■■□□□ 1.47
PRKCSH-204ENST00000587290 RTEL1-TNFRSF6BF6WH68 1400 aa24.25■■□□□ 1.47
PRKCSH-204ENST00000587290 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
PRKCSH-204ENST00000587290 PTPRTO14522 1441 aa24.24■■□□□ 1.47
PRKCSH-204ENST00000587290 LRRC9Q6ZRR7 1453 aa24.23■■□□□ 1.47
PRKCSH-204ENST00000587290 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
PRKCSH-204ENST00000587290 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
PRKCSH-204ENST00000587290 LTBP4Q8N2S1 1624 aa24.19■■□□□ 1.46
PRKCSH-204ENST00000587290 ARHGEF5Q12774 1597 aa24.19■■□□□ 1.46
PRKCSH-204ENST00000587290 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
PRKCSH-204ENST00000587290 KIF3BO15066 747 aa24.17■■□□□ 1.46
PRKCSH-204ENST00000587290 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
PRKCSH-204ENST00000587290 KDM5DQ9BY66 1539 aa24.14■■□□□ 1.45
PRKCSH-204ENST00000587290 DNMT1P26358 1616 aaKnown RBP24.11■■□□□ 1.45
PRKCSH-204ENST00000587290 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
PRKCSH-204ENST00000587290 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
PRKCSH-204ENST00000587290 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms