RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 PPRC1Q5VV67 1664 aaKnown RBP22.92■■□□□ 1.26
NFIX-208ENST00000587260 TRIM26Q12899 539 aaPredicted RBP22.92■■□□□ 1.26
NFIX-208ENST00000587260 PLCH2O75038 1416 aa22.91■■□□□ 1.26
NFIX-208ENST00000587260 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
NFIX-208ENST00000587260 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
NFIX-208ENST00000587260 ARAP3Q8WWN8 1544 aa22.89■■□□□ 1.26
NFIX-208ENST00000587260 SAMD9LQ8IVG5 1584 aa22.88■■□□□ 1.25
NFIX-208ENST00000587260 CFAP74Q9C0B2 1584 aa22.88■■□□□ 1.25
NFIX-208ENST00000587260 CFDP1Q9UEE9 299 aaPredicted RBP22.87■■□□□ 1.25
NFIX-208ENST00000587260 FANCAO15360 1455 aa22.86■■□□□ 1.25
NFIX-208ENST00000587260 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
NFIX-208ENST00000587260 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
NFIX-208ENST00000587260 ZNF777Q9ULD5 760 aaPredicted RBP22.84■■□□□ 1.25
NFIX-208ENST00000587260 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
NFIX-208ENST00000587260 ABCC1P33527 1531 aa22.8■■□□□ 1.24
NFIX-208ENST00000587260 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
NFIX-208ENST00000587260 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
NFIX-208ENST00000587260 ZNF644Q9H582 1327 aaPredicted RBP22.8■■□□□ 1.24
NFIX-208ENST00000587260 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
NFIX-208ENST00000587260 EFCAB2Q5VUJ9 269 aa22.78■■□□□ 1.24
NFIX-208ENST00000587260 FAM50AQ14320 339 aaKnown RBP22.77■■□□□ 1.24
NFIX-208ENST00000587260 ADGRL1O94910 1474 aa22.77■■□□□ 1.23
NFIX-208ENST00000587260 NEO1Q92859 1461 aa22.77■■□□□ 1.23
NFIX-208ENST00000587260 AKNAQ7Z591 1439 aa22.76■■□□□ 1.23
NFIX-208ENST00000587260 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
NFIX-208ENST00000587260 ARHGEF12Q9NZN5 1544 aa22.72■■□□□ 1.23
NFIX-208ENST00000587260 DNMT1P26358 1616 aaKnown RBP22.72■■□□□ 1.23
NFIX-208ENST00000587260 CROCC2H7BZ55 1655 aa22.72■■□□□ 1.23
NFIX-208ENST00000587260 PCGF6Q9BYE7 350 aa22.72■■□□□ 1.23
NFIX-208ENST00000587260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.72■■□□□ 1.23
NFIX-208ENST00000587260 ARHGEF5Q12774 1597 aa22.69■■□□□ 1.22
NFIX-208ENST00000587260 SCAPERQ9BY12 1400 aa22.69■■□□□ 1.22
NFIX-208ENST00000587260 MBD5Q9P267 1494 aa22.68■■□□□ 1.22
NFIX-208ENST00000587260 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.222e-6■■■■□ 21.1
NFIX-208ENST00000587260 KIAA1107Q9UPP5 1409 aa22.67■■□□□ 1.22
NFIX-208ENST00000587260 RICTORQ6R327 1708 aa22.67■■□□□ 1.22
NFIX-208ENST00000587260 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
NFIX-208ENST00000587260 ITGAEP38570 1179 aa22.66■■□□□ 1.22
NFIX-208ENST00000587260 DAPK1P53355 1430 aa22.65■■□□□ 1.22
NFIX-208ENST00000587260 TRAPPC8Q9Y2L5 1435 aa22.65■■□□□ 1.22
NFIX-208ENST00000587260 FRMPD1Q5SYB0 1578 aa22.65■■□□□ 1.22
NFIX-208ENST00000587260 POGZQ7Z3K3 1410 aa22.64■■□□□ 1.22
NFIX-208ENST00000587260 ABCC5O15440 1437 aa22.63■■□□□ 1.21
NFIX-208ENST00000587260 DENND4BO75064 1496 aaPredicted RBP22.63■■□□□ 1.21
NFIX-208ENST00000587260 KDM6BO15054 1643 aa22.62■■□□□ 1.21
NFIX-208ENST00000587260 ZNF518AQ6AHZ1 1483 aa22.61■■□□□ 1.21
NFIX-208ENST00000587260 ADGBQ8N7X0 1667 aa22.61■■□□□ 1.21
NFIX-208ENST00000587260 KDM5CP41229 1560 aa22.59■■□□□ 1.21
NFIX-208ENST00000587260 COL17A1Q9UMD9 1497 aaPredicted RBP22.59■■□□□ 1.21
NFIX-208ENST00000587260 PTPRKQ15262 1439 aa22.59■■□□□ 1.21
NFIX-208ENST00000587260 INO80Q9ULG1 1556 aaPredicted RBP22.58■■□□□ 1.2
NFIX-208ENST00000587260 SHANK2Q9UPX8 1470 aa22.58■■□□□ 1.2
NFIX-208ENST00000587260 RAPGEF3O95398 923 aa22.57■■□□□ 1.2
NFIX-208ENST00000587260 AFAP1Q8N556 730 aa22.57■■□□□ 1.2
NFIX-208ENST00000587260 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
NFIX-208ENST00000587260 HECW2Q9P2P5 1572 aa22.57■■□□□ 1.2
NFIX-208ENST00000587260 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
NFIX-208ENST00000587260 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
NFIX-208ENST00000587260 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
NFIX-208ENST00000587260 ATP7AQ04656 1500 aa22.54■■□□□ 1.2
NFIX-208ENST00000587260 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
NFIX-208ENST00000587260 ZMYM4Q5VZL5 1548 aa22.53■■□□□ 1.2
NFIX-208ENST00000587260 RSPH4AQ5TD94 716 aa22.52■■□□□ 1.2
NFIX-208ENST00000587260 TSPY4P0CV99 314 aa22.52■■□□□ 1.19
NFIX-208ENST00000587260 TSPY10P0CW01 314 aa22.52■■□□□ 1.19
NFIX-208ENST00000587260 SPAG9O60271 1321 aaKnown RBP22.51■■□□□ 1.19
NFIX-208ENST00000587260 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
NFIX-208ENST00000587260 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
NFIX-208ENST00000587260 ABCA6Q8N139 1617 aa22.49■■□□□ 1.19
NFIX-208ENST00000587260 ADGRL2O95490 1459 aa22.48■■□□□ 1.19
NFIX-208ENST00000587260 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
NFIX-208ENST00000587260 MLH3Q9UHC1 1453 aa22.47■■□□□ 1.19
NFIX-208ENST00000587260 DIP2CQ9Y2E4 1556 aa22.45■■□□□ 1.18
NFIX-208ENST00000587260 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
NFIX-208ENST00000587260 ARHGEF40Q8TER5 1519 aa22.45■■□□□ 1.18
NFIX-208ENST00000587260 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
NFIX-208ENST00000587260 YEATS2Q9ULM3 1422 aa22.43■■□□□ 1.18
NFIX-208ENST00000587260 RRP7BPQ9NSQ0 103 aa22.43■■□□□ 1.18
NFIX-208ENST00000587260 ROCK1Q13464 1354 aa22.43■■□□□ 1.18
NFIX-208ENST00000587260 NCOA1Q15788 1441 aa22.43■■□□□ 1.18
NFIX-208ENST00000587260 KIF15Q9NS87 1388 aa22.41■■□□□ 1.18
NFIX-208ENST00000587260 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
NFIX-208ENST00000587260 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
NFIX-208ENST00000587260 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
NFIX-208ENST00000587260 NAIPQ13075 1403 aa22.37■■□□□ 1.17
NFIX-208ENST00000587260 A2MP01023 1474 aa22.35■■□□□ 1.17
NFIX-208ENST00000587260 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
NFIX-208ENST00000587260 ATP10AO60312 1499 aa22.32■■□□□ 1.16
NFIX-208ENST00000587260 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
NFIX-208ENST00000587260 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
NFIX-208ENST00000587260 EIF2AK4Q9P2K8 1649 aaKnown RBP22.3■■□□□ 1.16
NFIX-208ENST00000587260 REREQ9P2R6 1566 aa22.3■■□□□ 1.16
NFIX-208ENST00000587260 ERBINQ96RT1 1412 aa22.3■■□□□ 1.16
NFIX-208ENST00000587260 HRCP23327 699 aa22.28■■□□□ 1.16
NFIX-208ENST00000587260 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
NFIX-208ENST00000587260 DHX29Q7Z478 1369 aaKnown RBP22.27■■□□□ 1.16
NFIX-208ENST00000587260 BCORL1Q5H9F3 1711 aa22.25■■□□□ 1.15
NFIX-208ENST00000587260 UNC13BO14795 1591 aa22.23■■□□□ 1.15
NFIX-208ENST00000587260 DEPDC5O75140 1603 aa22.22■■□□□ 1.15
NFIX-208ENST00000587260 RNF17Q9BXT8 1623 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms