RNA–Protein interactions for RNA: ENST00000587184.5

LAMA3-207, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,007 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-207ENST00000587184 PKD2Q13563 968 aa12.47□□□□□ -0.41
LAMA3-207ENST00000587184 NUP155O75694 1391 aa12.47□□□□□ -0.41
LAMA3-207ENST00000587184 DISP1Q96F81 1524 aa12.46□□□□□ -0.41
LAMA3-207ENST00000587184 FOXD1Q16676 465 aa12.46□□□□□ -0.41
LAMA3-207ENST00000587184 ANP32CO43423 234 aa12.45□□□□□ -0.42
LAMA3-207ENST00000587184 RGL3Q3MIN7 710 aa12.45□□□□□ -0.42
LAMA3-207ENST00000587184 SAMD9Q5K651 1589 aa12.45□□□□□ -0.42
LAMA3-207ENST00000587184 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
LAMA3-207ENST00000587184 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
LAMA3-207ENST00000587184 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
LAMA3-207ENST00000587184 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
LAMA3-207ENST00000587184 KANK1Q14678 1352 aa12.43□□□□□ -0.42
LAMA3-207ENST00000587184 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
LAMA3-207ENST00000587184 HIRIP3Q9BW71 556 aaPredicted RBP12.42□□□□□ -0.42
LAMA3-207ENST00000587184 DDX10Q13206 875 aaKnown RBP12.42□□□□□ -0.42
LAMA3-207ENST00000587184 ARHGAP5Q13017 1502 aa12.41□□□□□ -0.42
LAMA3-207ENST00000587184 ATP10BO94823 1461 aa12.4□□□□□ -0.42
LAMA3-207ENST00000587184 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
LAMA3-207ENST00000587184 KIF3BO15066 747 aa12.4□□□□□ -0.42
LAMA3-207ENST00000587184 GGT6Q6P531 493 aa12.39□□□□□ -0.43
LAMA3-207ENST00000587184 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
LAMA3-207ENST00000587184 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
LAMA3-207ENST00000587184 HFM1A2PYH4 1435 aa12.38□□□□□ -0.43
LAMA3-207ENST00000587184 CFAP43Q8NDM7 1665 aa12.37□□□□□ -0.43
LAMA3-207ENST00000587184 PPP1R15AO75807 674 aaPredicted RBP12.37□□□□□ -0.43
LAMA3-207ENST00000587184 FAM69CQ0P6D2 419 aa12.37□□□□□ -0.43
LAMA3-207ENST00000587184 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
LAMA3-207ENST00000587184 DAPK1P53355 1430 aa12.37□□□□□ -0.43
LAMA3-207ENST00000587184 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
LAMA3-207ENST00000587184 BCANQ96GW7 911 aa12.37□□□□□ -0.43
LAMA3-207ENST00000587184 ANKRD50Q9ULJ7 1429 aa12.36□□□□□ -0.43
LAMA3-207ENST00000587184 KIF14Q15058 1648 aa12.36□□□□□ -0.43
LAMA3-207ENST00000587184 AFAP1Q8N556 730 aa12.36□□□□□ -0.43
LAMA3-207ENST00000587184 PLEKHH2Q8IVE3 1493 aa12.35□□□□□ -0.43
LAMA3-207ENST00000587184 DCAF11Q8TEB1 546 aa12.35□□□□□ -0.43
LAMA3-207ENST00000587184 PLPPR3Q6T4P5 718 aa12.34□□□□□ -0.43
LAMA3-207ENST00000587184 C9orf84Q5VXU9 1444 aa12.34□□□□□ -0.43
LAMA3-207ENST00000587184 NAIPQ13075 1403 aa12.33□□□□□ -0.44
LAMA3-207ENST00000587184 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.44
LAMA3-207ENST00000587184 GPATCH8Q9UKJ3 1502 aaKnown RBP12.33□□□□□ -0.44
LAMA3-207ENST00000587184 CAMSAP2Q08AD1 1489 aa12.32□□□□□ -0.44
LAMA3-207ENST00000587184 CARD11Q9BXL7 1154 aa12.32□□□□□ -0.44
LAMA3-207ENST00000587184 ROCK1Q13464 1354 aa12.32□□□□□ -0.44
LAMA3-207ENST00000587184 ABCC5O15440 1437 aa12.32□□□□□ -0.44
LAMA3-207ENST00000587184 MLECQ14165 292 aa12.3□□□□□ -0.44
LAMA3-207ENST00000587184 CHD1O14646 1710 aa12.29□□□□□ -0.44
LAMA3-207ENST00000587184 MIER1Q8N108 512 aa12.29□□□□□ -0.44
LAMA3-207ENST00000587184 WASHC2CQ9Y4E1 1318 aa12.28□□□□□ -0.44
LAMA3-207ENST00000587184 NEFLP07196 543 aa12.28□□□□□ -0.44
LAMA3-207ENST00000587184 ABCC2Q92887 1545 aa12.28□□□□□ -0.44
LAMA3-207ENST00000587184 CCDC141Q6ZP82 1450 aa12.27□□□□□ -0.44
LAMA3-207ENST00000587184 AKNAQ7Z591 1439 aa12.27□□□□□ -0.45
LAMA3-207ENST00000587184 SCAPERQ9BY12 1400 aa12.27□□□□□ -0.45
LAMA3-207ENST00000587184 PTPRKQ15262 1439 aa12.25□□□□□ -0.45
LAMA3-207ENST00000587184 CD109Q6YHK3 1445 aa12.25□□□□□ -0.45
LAMA3-207ENST00000587184 CCDC144AA2RUR9 1427 aa12.25□□□□□ -0.45
LAMA3-207ENST00000587184 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
LAMA3-207ENST00000587184 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
LAMA3-207ENST00000587184 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
LAMA3-207ENST00000587184 ASXL2Q76L83 1435 aa12.24□□□□□ -0.45
LAMA3-207ENST00000587184 MAGI3Q5TCQ9 1506 aa12.24□□□□□ -0.45
LAMA3-207ENST00000587184 PLCH2O75038 1416 aa12.23□□□□□ -0.45
LAMA3-207ENST00000587184 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
LAMA3-207ENST00000587184 ABCA8O94911 1581 aa12.23□□□□□ -0.45
LAMA3-207ENST00000587184 SENP3Q9H4L4 574 aaPredicted RBP12.22□□□□□ -0.45
LAMA3-207ENST00000587184 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.45
LAMA3-207ENST00000587184 RAPGEF3O95398 923 aa12.21□□□□□ -0.46
LAMA3-207ENST00000587184 FANCAO15360 1455 aa12.2□□□□□ -0.46
LAMA3-207ENST00000587184 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
LAMA3-207ENST00000587184 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
LAMA3-207ENST00000587184 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
LAMA3-207ENST00000587184 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
LAMA3-207ENST00000587184 UHRF1BP1LA0JNW5 1464 aa12.16□□□□□ -0.46
LAMA3-207ENST00000587184 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
LAMA3-207ENST00000587184 ERCC6L2Q5T890 1561 aa12.15□□□□□ -0.46
LAMA3-207ENST00000587184 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
LAMA3-207ENST00000587184 TMF1P82094 1093 aa12.14□□□□□ -0.47
LAMA3-207ENST00000587184 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
LAMA3-207ENST00000587184 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
LAMA3-207ENST00000587184 MRS2Q9HD23 443 aa12.13□□□□□ -0.47
LAMA3-207ENST00000587184 KDM5BQ9UGL1 1544 aa12.13□□□□□ -0.47
LAMA3-207ENST00000587184 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
LAMA3-207ENST00000587184 ANKRD30BQ9BXX2 1392 aa12.11□□□□□ -0.47
LAMA3-207ENST00000587184 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
LAMA3-207ENST00000587184 DNMT1P26358 1616 aaKnown RBP12.11□□□□□ -0.47
LAMA3-207ENST00000587184 TRAPPC8Q9Y2L5 1435 aa12.1□□□□□ -0.47
LAMA3-207ENST00000587184 DENND4BO75064 1496 aaPredicted RBP12.1□□□□□ -0.47
LAMA3-207ENST00000587184 STAC3Q96MF2 364 aa12.1□□□□□ -0.47
LAMA3-207ENST00000587184 POGKQ9P215 609 aa12.1□□□□□ -0.47
LAMA3-207ENST00000587184 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
LAMA3-207ENST00000587184 SHANK2Q9UPX8 1470 aa12.09□□□□□ -0.47
LAMA3-207ENST00000587184 HNRNPUQ00839 825 aaKnown RBP eCLIP12.09□□□□□ -0.47
LAMA3-207ENST00000587184 KNSTRNQ9Y448 316 aa12.08□□□□□ -0.48
LAMA3-207ENST00000587184 ST20-MTHFSA0A0A6YYL1 179 aa12.08□□□□□ -0.48
LAMA3-207ENST00000587184 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
LAMA3-207ENST00000587184 DHX29Q7Z478 1369 aaKnown RBP12.07□□□□□ -0.48
LAMA3-207ENST00000587184 MYT1Q01538 1121 aa12.07□□□□□ -0.48
LAMA3-207ENST00000587184 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
LAMA3-207ENST00000587184 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
LAMA3-207ENST00000587184 USP47Q96K76 1375 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms