RNA–Protein interactions for RNA: ENST00000586954.1

LINC00662-203, long intergenic non-protein coding RNA 662, humanhuman

TSL 2 BASIC

Gene LINC00662, Length 2,254 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-203ENST00000586954 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
LINC00662-203ENST00000586954 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
LINC00662-203ENST00000586954 CDC42BPBQ9Y5S2 1711 aa12.74□□□□□ -0.37
LINC00662-203ENST00000586954 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
LINC00662-203ENST00000586954 CFAP74Q9C0B2 1584 aa12.74□□□□□ -0.37
LINC00662-203ENST00000586954 GPATCH8Q9UKJ3 1502 aaKnown RBP12.73□□□□□ -0.37
LINC00662-203ENST00000586954 CDC42BPAQ5VT25 1732 aa12.73□□□□□ -0.37
LINC00662-203ENST00000586954 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
LINC00662-203ENST00000586954 CCNB3Q8WWL7 1395 aa12.73□□□□□ -0.37
LINC00662-203ENST00000586954 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
LINC00662-203ENST00000586954 DENND4BO75064 1496 aaPredicted RBP12.72□□□□□ -0.37
LINC00662-203ENST00000586954 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
LINC00662-203ENST00000586954 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
LINC00662-203ENST00000586954 PREX2Q70Z35 1606 aa12.71□□□□□ -0.37
LINC00662-203ENST00000586954 MSH5O43196 834 aa12.71□□□□□ -0.37
LINC00662-203ENST00000586954 CFDP1Q9UEE9 299 aaPredicted RBP12.71□□□□□ -0.37
LINC00662-203ENST00000586954 NCOA2Q15596 1464 aa12.7□□□□□ -0.38
LINC00662-203ENST00000586954 SUPT6HQ7KZ85 1726 aaKnown RBP12.7□□□□□ -0.38
LINC00662-203ENST00000586954 FRMPD1Q5SYB0 1578 aa12.68□□□□□ -0.38
LINC00662-203ENST00000586954 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
LINC00662-203ENST00000586954 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
LINC00662-203ENST00000586954 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
LINC00662-203ENST00000586954 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
LINC00662-203ENST00000586954 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
LINC00662-203ENST00000586954 HNRNPMP52272 730 aaKnown RBP eCLIP12.65□□□□□ -0.382e-6■■□□□ 13.9
LINC00662-203ENST00000586954 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
LINC00662-203ENST00000586954 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
LINC00662-203ENST00000586954 ABCC1P33527 1531 aa12.64□□□□□ -0.39
LINC00662-203ENST00000586954 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
LINC00662-203ENST00000586954 ZNF518AQ6AHZ1 1483 aa12.63□□□□□ -0.39
LINC00662-203ENST00000586954 MYOM3Q5VTT5 1437 aa12.63□□□□□ -0.39
LINC00662-203ENST00000586954 KIAA1107Q9UPP5 1409 aa12.62□□□□□ -0.39
LINC00662-203ENST00000586954 MYT1LQ9UL68 1186 aa12.62□□□□□ -0.39
LINC00662-203ENST00000586954 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
LINC00662-203ENST00000586954 MAGI2Q86UL8 1455 aa12.62□□□□□ -0.39
LINC00662-203ENST00000586954 PLEKHH2Q8IVE3 1493 aa12.62□□□□□ -0.39
LINC00662-203ENST00000586954 YEATS2Q9ULM3 1422 aa12.61□□□□□ -0.39
LINC00662-203ENST00000586954 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
LINC00662-203ENST00000586954 PHF23Q9BUL5 403 aaPredicted RBP12.6□□□□□ -0.39
LINC00662-203ENST00000586954 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
LINC00662-203ENST00000586954 KDM5CP41229 1560 aa12.59□□□□□ -0.39
LINC00662-203ENST00000586954 FGD6Q6ZV73 1430 aa12.59□□□□□ -0.39
LINC00662-203ENST00000586954 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
LINC00662-203ENST00000586954 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
LINC00662-203ENST00000586954 RRBP1Q9P2E9 1410 aaKnown RBP12.59□□□□□ -0.39
LINC00662-203ENST00000586954 ARID4BQ4LE39 1312 aaPredicted RBP12.58□□□□□ -0.4
LINC00662-203ENST00000586954 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
LINC00662-203ENST00000586954 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
LINC00662-203ENST00000586954 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
LINC00662-203ENST00000586954 MBD5Q9P267 1494 aa12.58□□□□□ -0.4
LINC00662-203ENST00000586954 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
LINC00662-203ENST00000586954 ATP10AO60312 1499 aa12.56□□□□□ -0.4
LINC00662-203ENST00000586954 RSPH4AQ5TD94 716 aa12.56□□□□□ -0.4
LINC00662-203ENST00000586954 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
LINC00662-203ENST00000586954 TCOF1Q13428 1488 aaKnown RBP12.56□□□□□ -0.4
LINC00662-203ENST00000586954 KIDINS220Q9ULH0 1771 aa12.54□□□□□ -0.4
LINC00662-203ENST00000586954 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
LINC00662-203ENST00000586954 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00662-203ENST00000586954 C9orf84Q5VXU9 1444 aa12.53□□□□□ -0.4
LINC00662-203ENST00000586954 TSPY4P0CV99 314 aa12.53□□□□□ -0.4
LINC00662-203ENST00000586954 TSPY10P0CW01 314 aa12.53□□□□□ -0.4
LINC00662-203ENST00000586954 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.4
LINC00662-203ENST00000586954 DIP2CQ9Y2E4 1556 aa12.52□□□□□ -0.4
LINC00662-203ENST00000586954 ABCA6Q8N139 1617 aa12.52□□□□□ -0.41
LINC00662-203ENST00000586954 SIGLEC1Q9BZZ2 1709 aa12.52□□□□□ -0.41
LINC00662-203ENST00000586954 MLECQ14165 292 aa12.51□□□□□ -0.41
LINC00662-203ENST00000586954 ATP7AQ04656 1500 aa12.51□□□□□ -0.41
LINC00662-203ENST00000586954 ARHGEF5Q12774 1597 aa12.51□□□□□ -0.41
LINC00662-203ENST00000586954 RTEL1-TNFRSF6BF6WH68 1400 aa12.5□□□□□ -0.41
LINC00662-203ENST00000586954 INO80Q9ULG1 1556 aaPredicted RBP12.49□□□□□ -0.41
LINC00662-203ENST00000586954 BCORL1Q5H9F3 1711 aa12.49□□□□□ -0.41
LINC00662-203ENST00000586954 TRIM26Q12899 539 aaPredicted RBP12.49□□□□□ -0.41
LINC00662-203ENST00000586954 FAM50AQ14320 339 aaKnown RBP12.49□□□□□ -0.41
LINC00662-203ENST00000586954 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
LINC00662-203ENST00000586954 ADAMTSL3P82987 1691 aa12.47□□□□□ -0.41
LINC00662-203ENST00000586954 ABCC5O15440 1437 aa12.47□□□□□ -0.41
LINC00662-203ENST00000586954 SLC24A1O60721 1099 aa12.46□□□□□ -0.41
LINC00662-203ENST00000586954 A2MP01023 1474 aa12.46□□□□□ -0.41
LINC00662-203ENST00000586954 DNMT1P26358 1616 aaKnown RBP12.45□□□□□ -0.42
LINC00662-203ENST00000586954 PTPRKQ15262 1439 aa12.45□□□□□ -0.42
LINC00662-203ENST00000586954 AGLP35573 1532 aa12.45□□□□□ -0.42
LINC00662-203ENST00000586954 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
LINC00662-203ENST00000586954 DHX29Q7Z478 1369 aaKnown RBP12.44□□□□□ -0.42
LINC00662-203ENST00000586954 DAPK1P53355 1430 aa12.44□□□□□ -0.42
LINC00662-203ENST00000586954 ADGBQ8N7X0 1667 aa12.44□□□□□ -0.42
LINC00662-203ENST00000586954 MADDQ8WXG6 1647 aa12.44□□□□□ -0.42
LINC00662-203ENST00000586954 MAST1Q9Y2H9 1570 aa12.43□□□□□ -0.42
LINC00662-203ENST00000586954 PLXNC1O60486 1568 aa12.42□□□□□ -0.42
LINC00662-203ENST00000586954 GGT6Q6P531 493 aa12.42□□□□□ -0.42
LINC00662-203ENST00000586954 RRP7BPQ9NSQ0 103 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 PTPRMP28827 1452 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 CROCC2H7BZ55 1655 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 KIF3BO15066 747 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
LINC00662-203ENST00000586954 RIMS1Q86UR5 1692 aaKnown RBP12.41□□□□□ -0.42
LINC00662-203ENST00000586954 FER1L4A9Z1Z3 1794 aa12.4□□□□□ -0.42
LINC00662-203ENST00000586954 ESF1Q9H501 851 aaKnown RBP12.4□□□□□ -0.42
LINC00662-203ENST00000586954 ITGAEP38570 1179 aa12.39□□□□□ -0.43
LINC00662-203ENST00000586954 KIF15Q9NS87 1388 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms