RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 TROQ12816 1431 aaPredicted RBP23.03■■□□□ 1.28
ATG4D-206ENST00000586863 SCAPERQ9BY12 1400 aa23.03■■□□□ 1.28
ATG4D-206ENST00000586863 RIMS1Q86UR5 1692 aaKnown RBP23.03■■□□□ 1.28
ATG4D-206ENST00000586863 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
ATG4D-206ENST00000586863 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
ATG4D-206ENST00000586863 MAGI2Q86UL8 1455 aa23.01■■□□□ 1.27
ATG4D-206ENST00000586863 ILDR1Q86SU0 546 aaPredicted RBP22.99■■□□□ 1.27
ATG4D-206ENST00000586863 EFCAB2Q5VUJ9 269 aa22.97■■□□□ 1.27
ATG4D-206ENST00000586863 CLIP1P30622 1438 aa22.97■■□□□ 1.27
ATG4D-206ENST00000586863 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
ATG4D-206ENST00000586863 ARHGAP5Q13017 1502 aa22.96■■□□□ 1.27
ATG4D-206ENST00000586863 CDC42BPBQ9Y5S2 1711 aa22.94■■□□□ 1.26
ATG4D-206ENST00000586863 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
ATG4D-206ENST00000586863 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
ATG4D-206ENST00000586863 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
ATG4D-206ENST00000586863 PREX2Q70Z35 1606 aa22.9■■□□□ 1.26
ATG4D-206ENST00000586863 KDM5CP41229 1560 aa22.9■■□□□ 1.26
ATG4D-206ENST00000586863 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
ATG4D-206ENST00000586863 ATP10AO60312 1499 aa22.89■■□□□ 1.25
ATG4D-206ENST00000586863 C9orf84Q5VXU9 1444 aa22.89■■□□□ 1.25
ATG4D-206ENST00000586863 FYCO1Q9BQS8 1478 aa22.88■■□□□ 1.25
ATG4D-206ENST00000586863 MLECQ14165 292 aa22.88■■□□□ 1.25
ATG4D-206ENST00000586863 PLPPR3Q6T4P5 718 aa22.85■■□□□ 1.25
ATG4D-206ENST00000586863 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
ATG4D-206ENST00000586863 ARHGEF12Q9NZN5 1544 aa22.85■■□□□ 1.25
ATG4D-206ENST00000586863 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
ATG4D-206ENST00000586863 ABCC1P33527 1531 aa22.84■■□□□ 1.25
ATG4D-206ENST00000586863 DIP2CQ9Y2E4 1556 aa22.83■■□□□ 1.25
ATG4D-206ENST00000586863 ITSN2Q9NZM3 1697 aa22.82■■□□□ 1.24
ATG4D-206ENST00000586863 ABCA6Q8N139 1617 aa22.81■■□□□ 1.24
ATG4D-206ENST00000586863 TRAPPC8Q9Y2L5 1435 aa22.79■■□□□ 1.24
ATG4D-206ENST00000586863 MLH3Q9UHC1 1453 aa22.78■■□□□ 1.24
ATG4D-206ENST00000586863 REREQ9P2R6 1566 aa22.77■■□□□ 1.24
ATG4D-206ENST00000586863 HSPA2P54652 639 aa22.76■■□□□ 1.23
ATG4D-206ENST00000586863 MYT1LQ9UL68 1186 aa22.75■■□□□ 1.23
ATG4D-206ENST00000586863 KIDINS220Q9ULH0 1771 aa22.73■■□□□ 1.23
ATG4D-206ENST00000586863 SAMD9LQ8IVG5 1584 aa22.73■■□□□ 1.23
ATG4D-206ENST00000586863 GPATCH8Q9UKJ3 1502 aaKnown RBP22.72■■□□□ 1.23
ATG4D-206ENST00000586863 PREX1Q8TCU6 1659 aa22.7■■□□□ 1.22
ATG4D-206ENST00000586863 SYCP2Q9BX26 1530 aa22.69■■□□□ 1.22
ATG4D-206ENST00000586863 AGLP35573 1532 aa22.68■■□□□ 1.22
ATG4D-206ENST00000586863 CEBPAP49715 358 aaPredicted RBP22.68■■□□□ 1.22
ATG4D-206ENST00000586863 ZNF777Q9ULD5 760 aaPredicted RBP22.67■■□□□ 1.22
ATG4D-206ENST00000586863 SETD1BQ9UPS6 1966 aaKnown RBP22.65■■□□□ 1.22
ATG4D-206ENST00000586863 C3P01024 1663 aa22.64■■□□□ 1.21
ATG4D-206ENST00000586863 FBXO41Q8TF61 875 aa22.63■■□□□ 1.21
ATG4D-206ENST00000586863 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
ATG4D-206ENST00000586863 CEP162Q5TB80 1403 aa22.61■■□□□ 1.21
ATG4D-206ENST00000586863 CCNB3Q8WWL7 1395 aa22.61■■□□□ 1.21
ATG4D-206ENST00000586863 TIAM1Q13009 1591 aa22.59■■□□□ 1.21
ATG4D-206ENST00000586863 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
ATG4D-206ENST00000586863 EHBP1L1Q8N3D4 1523 aa22.59■■□□□ 1.21
ATG4D-206ENST00000586863 HNRNPMP52272 730 aaKnown RBP eCLIP22.59■■□□□ 1.21
ATG4D-206ENST00000586863 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
ATG4D-206ENST00000586863 PLEKHH2Q8IVE3 1493 aa22.59■■□□□ 1.21
ATG4D-206ENST00000586863 INO80Q9ULG1 1556 aaPredicted RBP22.59■■□□□ 1.21
ATG4D-206ENST00000586863 ATP7AQ04656 1500 aa22.58■■□□□ 1.21
ATG4D-206ENST00000586863 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
ATG4D-206ENST00000586863 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
ATG4D-206ENST00000586863 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
ATG4D-206ENST00000586863 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
ATG4D-206ENST00000586863 PLXNC1O60486 1568 aa22.54■■□□□ 1.2
ATG4D-206ENST00000586863 ESF1Q9H501 851 aaKnown RBP22.53■■□□□ 1.2
ATG4D-206ENST00000586863 CNTLNQ9NXG0 1405 aa22.52■■□□□ 1.2
ATG4D-206ENST00000586863 MROH2AA6NES4 1674 aa22.51■■□□□ 1.19
ATG4D-206ENST00000586863 ZNF644Q9H582 1327 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-206ENST00000586863 A2MP01023 1474 aa22.49■■□□□ 1.19
ATG4D-206ENST00000586863 MBD5Q9P267 1494 aa22.48■■□□□ 1.19
ATG4D-206ENST00000586863 ADGBQ8N7X0 1667 aa22.47■■□□□ 1.19
ATG4D-206ENST00000586863 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
ATG4D-206ENST00000586863 NCOA2Q15596 1464 aa22.45■■□□□ 1.18
ATG4D-206ENST00000586863 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
ATG4D-206ENST00000586863 NPATQ14207 1427 aa22.42■■□□□ 1.18
ATG4D-206ENST00000586863 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
ATG4D-206ENST00000586863 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
ATG4D-206ENST00000586863 DMRT2Q9Y5R5 561 aa22.39■■□□□ 1.17
ATG4D-206ENST00000586863 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
ATG4D-206ENST00000586863 LOC105371045A0A1W2PR82 267 aa22.38■■□□□ 1.17
ATG4D-206ENST00000586863 CCDC141Q6ZP82 1450 aa22.38■■□□□ 1.17
ATG4D-206ENST00000586863 NCOA1Q15788 1441 aa22.38■■□□□ 1.17
ATG4D-206ENST00000586863 VPS8Q8N3P4 1428 aa22.38■■□□□ 1.17
ATG4D-206ENST00000586863 GGT6Q6P531 493 aa22.37■■□□□ 1.17
ATG4D-206ENST00000586863 PTPRTO14522 1441 aa22.37■■□□□ 1.17
ATG4D-206ENST00000586863 MYO3AQ8NEV4 1616 aa22.36■■□□□ 1.17
ATG4D-206ENST00000586863 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
ATG4D-206ENST00000586863 ZNF142P52746 1687 aaPredicted RBP22.35■■□□□ 1.17
ATG4D-206ENST00000586863 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
ATG4D-206ENST00000586863 DHX29Q7Z478 1369 aaKnown RBP22.33■■□□□ 1.17
ATG4D-206ENST00000586863 LRRC9Q6ZRR7 1453 aa22.33■■□□□ 1.16
ATG4D-206ENST00000586863 ARHGEF5Q12774 1597 aa22.31■■□□□ 1.16
ATG4D-206ENST00000586863 CEP170BQ9Y4F5 1589 aaPredicted RBP22.3■■□□□ 1.16
ATG4D-206ENST00000586863 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
ATG4D-206ENST00000586863 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
ATG4D-206ENST00000586863 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
ATG4D-206ENST00000586863 MAP3K1Q13233 1512 aa22.25■■□□□ 1.15
ATG4D-206ENST00000586863 KIF3BO15066 747 aa22.24■■□□□ 1.15
ATG4D-206ENST00000586863 KANK4Q5T7N3 995 aaPredicted RBP22.24■■□□□ 1.15
ATG4D-206ENST00000586863 KDM5DQ9BY66 1539 aa22.24■■□□□ 1.15
ATG4D-206ENST00000586863 PLA2R1Q13018 1463 aa22.23■■□□□ 1.15
ATG4D-206ENST00000586863 NCKAP5LQ9HCH0 1330 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms