RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
NPC1-204ENST00000586718 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
NPC1-204ENST00000586718 CFAP74Q9C0B2 1584 aa12.88□□□□□ -0.35
NPC1-204ENST00000586718 ADGBQ8N7X0 1667 aa12.86□□□□□ -0.35
NPC1-204ENST00000586718 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
NPC1-204ENST00000586718 PLEKHH2Q8IVE3 1493 aa12.85□□□□□ -0.35
NPC1-204ENST00000586718 SAMD9LQ8IVG5 1584 aa12.85□□□□□ -0.35
NPC1-204ENST00000586718 KCNH8Q96L42 1107 aa12.84□□□□□ -0.35
NPC1-204ENST00000586718 ARHGEF5Q12774 1597 aa12.83□□□□□ -0.36
NPC1-204ENST00000586718 GCC2Q8IWJ2 1684 aa12.83□□□□□ -0.36
NPC1-204ENST00000586718 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
NPC1-204ENST00000586718 PLCH2O75038 1416 aa12.82□□□□□ -0.36
NPC1-204ENST00000586718 ITGAEP38570 1179 aa12.82□□□□□ -0.36
NPC1-204ENST00000586718 ABCC1P33527 1531 aa12.82□□□□□ -0.36
NPC1-204ENST00000586718 GLI2P10070 1586 aa12.81□□□□□ -0.36
NPC1-204ENST00000586718 DAPK1P53355 1430 aa12.81□□□□□ -0.36
NPC1-204ENST00000586718 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
NPC1-204ENST00000586718 SYCP2Q9BX26 1530 aa12.81□□□□□ -0.36
NPC1-204ENST00000586718 AKNAQ7Z591 1439 aa12.8□□□□□ -0.36
NPC1-204ENST00000586718 ZNF777Q9ULD5 760 aaPredicted RBP12.8□□□□□ -0.36
NPC1-204ENST00000586718 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
NPC1-204ENST00000586718 CCDC141Q6ZP82 1450 aa12.79□□□□□ -0.36
NPC1-204ENST00000586718 FANCAO15360 1455 aa12.78□□□□□ -0.36
NPC1-204ENST00000586718 EFCAB2Q5VUJ9 269 aa12.77□□□□□ -0.37
NPC1-204ENST00000586718 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.37
NPC1-204ENST00000586718 ABCC5O15440 1437 aa12.76□□□□□ -0.37
NPC1-204ENST00000586718 CD109Q6YHK3 1445 aa12.76□□□□□ -0.37
NPC1-204ENST00000586718 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
NPC1-204ENST00000586718 HFM1A2PYH4 1435 aa12.75□□□□□ -0.37
NPC1-204ENST00000586718 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
NPC1-204ENST00000586718 ADGRL1O94910 1474 aa12.74□□□□□ -0.37
NPC1-204ENST00000586718 C9orf84Q5VXU9 1444 aa12.74□□□□□ -0.37
NPC1-204ENST00000586718 SETD5Q9C0A6 1442 aa12.74□□□□□ -0.37
NPC1-204ENST00000586718 ROCK1Q13464 1354 aa12.74□□□□□ -0.37
NPC1-204ENST00000586718 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
NPC1-204ENST00000586718 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
NPC1-204ENST00000586718 NEO1Q92859 1461 aa12.73□□□□□ -0.37
NPC1-204ENST00000586718 PTPRKQ15262 1439 aa12.73□□□□□ -0.37
NPC1-204ENST00000586718 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
NPC1-204ENST00000586718 MBD5Q9P267 1494 aa12.72□□□□□ -0.37
NPC1-204ENST00000586718 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
NPC1-204ENST00000586718 TEX14Q8IWB6 1497 aa12.72□□□□□ -0.37
NPC1-204ENST00000586718 ANKRD30AQ9BXX3 1397 aa12.71□□□□□ -0.37
NPC1-204ENST00000586718 RAB3GAP2Q9H2M9 1393 aa12.71□□□□□ -0.37
NPC1-204ENST00000586718 NAIPQ13075 1403 aa12.71□□□□□ -0.38
NPC1-204ENST00000586718 TSPOAP1O95153 1857 aa12.7□□□□□ -0.38
NPC1-204ENST00000586718 INO80Q9ULG1 1556 aaPredicted RBP12.69□□□□□ -0.38
NPC1-204ENST00000586718 TSPY4P0CV99 314 aa12.69□□□□□ -0.38
NPC1-204ENST00000586718 TSPY10P0CW01 314 aa12.69□□□□□ -0.38
NPC1-204ENST00000586718 ZFYVE16Q7Z3T8 1539 aa12.68□□□□□ -0.38
NPC1-204ENST00000586718 ARHGEF12Q9NZN5 1544 aa12.68□□□□□ -0.38
NPC1-204ENST00000586718 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
NPC1-204ENST00000586718 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
NPC1-204ENST00000586718 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
NPC1-204ENST00000586718 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
NPC1-204ENST00000586718 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
NPC1-204ENST00000586718 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
NPC1-204ENST00000586718 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
NPC1-204ENST00000586718 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
NPC1-204ENST00000586718 HECW2Q9P2P5 1572 aa12.66□□□□□ -0.38
NPC1-204ENST00000586718 POGZQ7Z3K3 1410 aa12.66□□□□□ -0.38
NPC1-204ENST00000586718 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
NPC1-204ENST00000586718 CCER1Q8TC90 406 aaPredicted RBP12.66□□□□□ -0.38
NPC1-204ENST00000586718 KDM5CP41229 1560 aa12.65□□□□□ -0.38
NPC1-204ENST00000586718 NCOA1Q15788 1441 aa12.65□□□□□ -0.38
NPC1-204ENST00000586718 TRAPPC8Q9Y2L5 1435 aa12.65□□□□□ -0.38
NPC1-204ENST00000586718 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
NPC1-204ENST00000586718 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
NPC1-204ENST00000586718 DUOX2Q9NRD8 1548 aa12.64□□□□□ -0.39
NPC1-204ENST00000586718 HRCP23327 699 aa12.64□□□□□ -0.39
NPC1-204ENST00000586718 RRP7BPQ9NSQ0 103 aa12.64□□□□□ -0.39
NPC1-204ENST00000586718 RICTORQ6R327 1708 aa12.64□□□□□ -0.39
NPC1-204ENST00000586718 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
NPC1-204ENST00000586718 SPAG9O60271 1321 aaKnown RBP12.62□□□□□ -0.39
NPC1-204ENST00000586718 KDM6BO15054 1643 aa12.62□□□□□ -0.39
NPC1-204ENST00000586718 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
NPC1-204ENST00000586718 EIF2AK4Q9P2K8 1649 aaKnown RBP12.61□□□□□ -0.39
NPC1-204ENST00000586718 ERBINQ96RT1 1412 aa12.61□□□□□ -0.39
NPC1-204ENST00000586718 DHX57Q6P158 1386 aaKnown RBP12.6□□□□□ -0.39
NPC1-204ENST00000586718 ZMYM4Q5VZL5 1548 aa12.6□□□□□ -0.39
NPC1-204ENST00000586718 KIDINS220Q9ULH0 1771 aa12.6□□□□□ -0.39
NPC1-204ENST00000586718 UNC13BO14795 1591 aa12.6□□□□□ -0.39
NPC1-204ENST00000586718 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
NPC1-204ENST00000586718 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
NPC1-204ENST00000586718 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
NPC1-204ENST00000586718 ABCA6Q8N139 1617 aa12.58□□□□□ -0.4
NPC1-204ENST00000586718 MLH3Q9UHC1 1453 aa12.58□□□□□ -0.4
NPC1-204ENST00000586718 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
NPC1-204ENST00000586718 KDM5DQ9BY66 1539 aa12.57□□□□□ -0.4
NPC1-204ENST00000586718 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
NPC1-204ENST00000586718 DIP2CQ9Y2E4 1556 aa12.55□□□□□ -0.4
NPC1-204ENST00000586718 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
NPC1-204ENST00000586718 TRIM52Q96A61 297 aa12.54□□□□□ -0.4
NPC1-204ENST00000586718 IQGAP3Q86VI3 1631 aa12.54□□□□□ -0.4
NPC1-204ENST00000586718 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
NPC1-204ENST00000586718 ARHGEF40Q8TER5 1519 aa12.53□□□□□ -0.4
NPC1-204ENST00000586718 BCORL1Q5H9F3 1711 aa12.53□□□□□ -0.4
NPC1-204ENST00000586718 A2MP01023 1474 aa12.53□□□□□ -0.4
NPC1-204ENST00000586718 RNF17Q9BXT8 1623 aaKnown RBP12.51□□□□□ -0.41
NPC1-204ENST00000586718 TRHP20396 242 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms