RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CFAP74Q9C0B2 1584 aa26.21■■□□□ 1.79
PRKCSH-203ENST00000586486 ARHGAP5Q13017 1502 aa26.2■■□□□ 1.78
PRKCSH-203ENST00000586486 MIA2Q96PC5 1412 aa26.2■■□□□ 1.78
PRKCSH-203ENST00000586486 TRHP20396 242 aaPredicted RBP26.2■■□□□ 1.78
PRKCSH-203ENST00000586486 TSPOAP1O95153 1857 aa26.2■■□□□ 1.78
PRKCSH-203ENST00000586486 TEX14Q8IWB6 1497 aa26.18■■□□□ 1.78
PRKCSH-203ENST00000586486 FANCAO15360 1455 aa26.17■■□□□ 1.78
PRKCSH-203ENST00000586486 FGD6Q6ZV73 1430 aa26.16■■□□□ 1.78
PRKCSH-203ENST00000586486 NEO1Q92859 1461 aa26.15■■□□□ 1.78
PRKCSH-203ENST00000586486 CFDP1Q9UEE9 299 aaPredicted RBP26.14■■□□□ 1.78
PRKCSH-203ENST00000586486 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
PRKCSH-203ENST00000586486 PTPN23Q9H3S7 1636 aa26.12■■□□□ 1.77
PRKCSH-203ENST00000586486 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
PRKCSH-203ENST00000586486 RRBP1Q9P2E9 1410 aaKnown RBP26.1■■□□□ 1.77
PRKCSH-203ENST00000586486 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
PRKCSH-203ENST00000586486 CAMSAP2Q08AD1 1489 aa26.08■■□□□ 1.77
PRKCSH-203ENST00000586486 ABCC1P33527 1531 aa26.08■■□□□ 1.77
PRKCSH-203ENST00000586486 PLEKHH2Q8IVE3 1493 aa26.07■■□□□ 1.76
PRKCSH-203ENST00000586486 AKNAQ7Z591 1439 aa26.07■■□□□ 1.76
PRKCSH-203ENST00000586486 KIAA1107Q9UPP5 1409 aa26.04■■□□□ 1.76
PRKCSH-203ENST00000586486 ADGRL1O94910 1474 aa26.04■■□□□ 1.76
PRKCSH-203ENST00000586486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.03■■□□□ 1.76
PRKCSH-203ENST00000586486 ZNF777Q9ULD5 760 aaPredicted RBP26.02■■□□□ 1.76
PRKCSH-203ENST00000586486 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
PRKCSH-203ENST00000586486 ZNF644Q9H582 1327 aaPredicted RBP26.01■■□□□ 1.75
PRKCSH-203ENST00000586486 ARHGEF5Q12774 1597 aa25.99■■□□□ 1.75
PRKCSH-203ENST00000586486 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
PRKCSH-203ENST00000586486 MBD5Q9P267 1494 aa25.98■■□□□ 1.75
PRKCSH-203ENST00000586486 SCAPERQ9BY12 1400 aa25.97■■□□□ 1.75
PRKCSH-203ENST00000586486 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.75
PRKCSH-203ENST00000586486 RICTORQ6R327 1708 aa25.94■■□□□ 1.74
PRKCSH-203ENST00000586486 POGZQ7Z3K3 1410 aa25.94■■□□□ 1.74
PRKCSH-203ENST00000586486 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
PRKCSH-203ENST00000586486 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
PRKCSH-203ENST00000586486 CROCC2H7BZ55 1655 aa25.92■■□□□ 1.74
PRKCSH-203ENST00000586486 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
PRKCSH-203ENST00000586486 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
PRKCSH-203ENST00000586486 FRMPD1Q5SYB0 1578 aa25.91■■□□□ 1.74
PRKCSH-203ENST00000586486 KDM5CP41229 1560 aa25.9■■□□□ 1.74
PRKCSH-203ENST00000586486 KDM6BO15054 1643 aa25.9■■□□□ 1.74
PRKCSH-203ENST00000586486 TRAPPC8Q9Y2L5 1435 aa25.9■■□□□ 1.74
PRKCSH-203ENST00000586486 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
PRKCSH-203ENST00000586486 RSPH4AQ5TD94 716 aa25.89■■□□□ 1.74
PRKCSH-203ENST00000586486 COL17A1Q9UMD9 1497 aaPredicted RBP25.89■■□□□ 1.73
PRKCSH-203ENST00000586486 DAPK1P53355 1430 aa25.88■■□□□ 1.73
PRKCSH-203ENST00000586486 SHANK2Q9UPX8 1470 aa25.87■■□□□ 1.73
PRKCSH-203ENST00000586486 ABCC5O15440 1437 aa25.87■■□□□ 1.73
PRKCSH-203ENST00000586486 ZMYM4Q5VZL5 1548 aa25.86■■□□□ 1.73
PRKCSH-203ENST00000586486 MAST1Q9Y2H9 1570 aa25.84■■□□□ 1.73
PRKCSH-203ENST00000586486 INO80Q9ULG1 1556 aaPredicted RBP25.83■■□□□ 1.72
PRKCSH-203ENST00000586486 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
PRKCSH-203ENST00000586486 HECW2Q9P2P5 1572 aa25.81■■□□□ 1.72
PRKCSH-203ENST00000586486 AFAP1Q8N556 730 aa25.81■■□□□ 1.72
PRKCSH-203ENST00000586486 ZFYVE16Q7Z3T8 1539 aa25.8■■□□□ 1.72
PRKCSH-203ENST00000586486 MLH3Q9UHC1 1453 aa25.79■■□□□ 1.72
PRKCSH-203ENST00000586486 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
PRKCSH-203ENST00000586486 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
PRKCSH-203ENST00000586486 RTEL1-TNFRSF6BF6WH68 1400 aa25.78■■□□□ 1.72
PRKCSH-203ENST00000586486 PTPRKQ15262 1439 aa25.78■■□□□ 1.72
PRKCSH-203ENST00000586486 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
PRKCSH-203ENST00000586486 MAGI2Q86UL8 1455 aa25.77■■□□□ 1.72
PRKCSH-203ENST00000586486 KIDINS220Q9ULH0 1771 aa25.77■■□□□ 1.72
PRKCSH-203ENST00000586486 TRIM26Q12899 539 aaPredicted RBP25.77■■□□□ 1.72
PRKCSH-203ENST00000586486 ADGRL2O95490 1459 aa25.76■■□□□ 1.71
PRKCSH-203ENST00000586486 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
PRKCSH-203ENST00000586486 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
PRKCSH-203ENST00000586486 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
PRKCSH-203ENST00000586486 SPAG9O60271 1321 aaKnown RBP25.75■■□□□ 1.71
PRKCSH-203ENST00000586486 ROCK1Q13464 1354 aa25.71■■□□□ 1.71
PRKCSH-203ENST00000586486 ARHGEF40Q8TER5 1519 aa25.71■■□□□ 1.71
PRKCSH-203ENST00000586486 ITGAEP38570 1179 aa25.7■■□□□ 1.7
PRKCSH-203ENST00000586486 ABCA6Q8N139 1617 aa25.7■■□□□ 1.7
PRKCSH-203ENST00000586486 NCOA1Q15788 1441 aa25.68■■□□□ 1.7
PRKCSH-203ENST00000586486 DIP2CQ9Y2E4 1556 aa25.68■■□□□ 1.7
PRKCSH-203ENST00000586486 ANKRD30AQ9BXX3 1397 aa25.67■■□□□ 1.7
PRKCSH-203ENST00000586486 YEATS2Q9ULM3 1422 aa25.65■■□□□ 1.7
PRKCSH-203ENST00000586486 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
PRKCSH-203ENST00000586486 GCC2Q8IWJ2 1684 aa25.63■■□□□ 1.69
PRKCSH-203ENST00000586486 REREQ9P2R6 1566 aa25.63■■□□□ 1.69
PRKCSH-203ENST00000586486 DUOX2Q9NRD8 1548 aa25.61■■□□□ 1.69
PRKCSH-203ENST00000586486 KIF15Q9NS87 1388 aa25.61■■□□□ 1.69
PRKCSH-203ENST00000586486 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
PRKCSH-203ENST00000586486 MYT1LQ9UL68 1186 aa25.6■■□□□ 1.69
PRKCSH-203ENST00000586486 ATP10AO60312 1499 aa25.59■■□□□ 1.69
PRKCSH-203ENST00000586486 A2MP01023 1474 aa25.57■■□□□ 1.68
PRKCSH-203ENST00000586486 NAIPQ13075 1403 aa25.57■■□□□ 1.68
PRKCSH-203ENST00000586486 RRP7BPQ9NSQ0 103 aa25.55■■□□□ 1.68
PRKCSH-203ENST00000586486 ERBINQ96RT1 1412 aa25.55■■□□□ 1.68
PRKCSH-203ENST00000586486 EIF2AK4Q9P2K8 1649 aaKnown RBP25.54■■□□□ 1.68
PRKCSH-203ENST00000586486 DHX29Q7Z478 1369 aaKnown RBP25.54■■□□□ 1.68
PRKCSH-203ENST00000586486 BCORL1Q5H9F3 1711 aa25.53■■□□□ 1.68
PRKCSH-203ENST00000586486 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
PRKCSH-203ENST00000586486 AGLP35573 1532 aa25.5■■□□□ 1.67
PRKCSH-203ENST00000586486 SIGLEC1Q9BZZ2 1709 aa25.5■■□□□ 1.67
PRKCSH-203ENST00000586486 SETD5Q9C0A6 1442 aa25.47■■□□□ 1.67
PRKCSH-203ENST00000586486 PCGF6Q9BYE7 350 aa25.46■■□□□ 1.67
PRKCSH-203ENST00000586486 RNF17Q9BXT8 1623 aaKnown RBP25.44■■□□□ 1.66
PRKCSH-203ENST00000586486 DEPDC5O75140 1603 aa25.44■■□□□ 1.66
PRKCSH-203ENST00000586486 UNC13BO14795 1591 aa25.41■■□□□ 1.66
PRKCSH-203ENST00000586486 RAB3GAP2Q9H2M9 1393 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms