RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
PALM3-202ENST00000586368 YEATS2Q9ULM3 1422 aa16.36■□□□□ 0.21
PALM3-202ENST00000586368 LRRIQ1Q96JM4 1722 aa16.36■□□□□ 0.21
PALM3-202ENST00000586368 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
PALM3-202ENST00000586368 MLECQ14165 292 aa16.35■□□□□ 0.21
PALM3-202ENST00000586368 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
PALM3-202ENST00000586368 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
PALM3-202ENST00000586368 ARHGAP5Q13017 1502 aa16.34■□□□□ 0.21
PALM3-202ENST00000586368 CASKIN1Q8WXD9 1431 aa16.33■□□□□ 0.2
PALM3-202ENST00000586368 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
PALM3-202ENST00000586368 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.2
PALM3-202ENST00000586368 RIMS1Q86UR5 1692 aaKnown RBP16.32■□□□□ 0.2
PALM3-202ENST00000586368 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
PALM3-202ENST00000586368 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
PALM3-202ENST00000586368 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
PALM3-202ENST00000586368 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
PALM3-202ENST00000586368 ATP10AO60312 1499 aa16.27■□□□□ 0.19
PALM3-202ENST00000586368 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
PALM3-202ENST00000586368 CDC42BPBQ9Y5S2 1711 aa16.26■□□□□ 0.19
PALM3-202ENST00000586368 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
PALM3-202ENST00000586368 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
PALM3-202ENST00000586368 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
PALM3-202ENST00000586368 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
PALM3-202ENST00000586368 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
PALM3-202ENST00000586368 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
PALM3-202ENST00000586368 HSPA2P54652 639 aa16.22■□□□□ 0.19
PALM3-202ENST00000586368 KDM5CP41229 1560 aa16.21■□□□□ 0.19
PALM3-202ENST00000586368 TRAPPC8Q9Y2L5 1435 aa16.19■□□□□ 0.18
PALM3-202ENST00000586368 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
PALM3-202ENST00000586368 CDC42BPAQ5VT25 1732 aa16.19■□□□□ 0.18
PALM3-202ENST00000586368 ABCC1P33527 1531 aa16.19■□□□□ 0.18
PALM3-202ENST00000586368 CEBPAP49715 358 aaPredicted RBP16.18■□□□□ 0.18
PALM3-202ENST00000586368 ITSN2Q9NZM3 1697 aa16.17■□□□□ 0.18
PALM3-202ENST00000586368 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
PALM3-202ENST00000586368 MLH3Q9UHC1 1453 aa16.16■□□□□ 0.18
PALM3-202ENST00000586368 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
PALM3-202ENST00000586368 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
PALM3-202ENST00000586368 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.18
PALM3-202ENST00000586368 HNRNPMP52272 730 aaKnown RBP eCLIP16.14■□□□□ 0.17
PALM3-202ENST00000586368 CFDP1Q9UEE9 299 aaPredicted RBP16.14■□□□□ 0.17
PALM3-202ENST00000586368 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
PALM3-202ENST00000586368 ESF1Q9H501 851 aaKnown RBP16.13■□□□□ 0.17
PALM3-202ENST00000586368 CEP162Q5TB80 1403 aa16.12■□□□□ 0.17
PALM3-202ENST00000586368 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
PALM3-202ENST00000586368 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
PALM3-202ENST00000586368 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
PALM3-202ENST00000586368 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
PALM3-202ENST00000586368 KIDINS220Q9ULH0 1771 aa16.1■□□□□ 0.17
PALM3-202ENST00000586368 FBXO41Q8TF61 875 aa16.08■□□□□ 0.16
PALM3-202ENST00000586368 AGLP35573 1532 aa16.07■□□□□ 0.16
PALM3-202ENST00000586368 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
PALM3-202ENST00000586368 PLEKHH2Q8IVE3 1493 aa16.05■□□□□ 0.16
PALM3-202ENST00000586368 KIAA1107Q9UPP5 1409 aa16.05■□□□□ 0.16
PALM3-202ENST00000586368 ZNF644Q9H582 1327 aaPredicted RBP16.05■□□□□ 0.16
PALM3-202ENST00000586368 LOC105371045A0A1W2PR82 267 aa16.05■□□□□ 0.16
PALM3-202ENST00000586368 EHBP1L1Q8N3D4 1523 aa16.04■□□□□ 0.16
PALM3-202ENST00000586368 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
PALM3-202ENST00000586368 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
PALM3-202ENST00000586368 SUPT6HQ7KZ85 1726 aaKnown RBP16.03■□□□□ 0.16
PALM3-202ENST00000586368 C3P01024 1663 aa16.03■□□□□ 0.16
PALM3-202ENST00000586368 ATP7AQ04656 1500 aa16.03■□□□□ 0.16
PALM3-202ENST00000586368 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
PALM3-202ENST00000586368 CNTLNQ9NXG0 1405 aa16.01■□□□□ 0.15
PALM3-202ENST00000586368 A2MP01023 1474 aa15.99■□□□□ 0.15
PALM3-202ENST00000586368 GGT6Q6P531 493 aa15.99■□□□□ 0.15
PALM3-202ENST00000586368 INO80Q9ULG1 1556 aaPredicted RBP15.99■□□□□ 0.15
PALM3-202ENST00000586368 CERKQ8TCT0 537 aa15.97■□□□□ 0.15
PALM3-202ENST00000586368 DMRT2Q9Y5R5 561 aa15.97■□□□□ 0.15
PALM3-202ENST00000586368 ZMYM3Q14202 1370 aa15.97■□□□□ 0.15
PALM3-202ENST00000586368 NCOA2Q15596 1464 aa15.97■□□□□ 0.15
PALM3-202ENST00000586368 MBD5Q9P267 1494 aa15.96■□□□□ 0.14
PALM3-202ENST00000586368 STRCQ7RTU9 1775 aa15.95■□□□□ 0.14
PALM3-202ENST00000586368 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
PALM3-202ENST00000586368 CLTCQ00610 1675 aaKnown RBP15.94■□□□□ 0.14
PALM3-202ENST00000586368 MROH2AA6NES4 1674 aa15.93■□□□□ 0.14
PALM3-202ENST00000586368 ADGBQ8N7X0 1667 aa15.93■□□□□ 0.14
PALM3-202ENST00000586368 VPS8Q8N3P4 1428 aa15.93■□□□□ 0.14
PALM3-202ENST00000586368 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
PALM3-202ENST00000586368 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
PALM3-202ENST00000586368 NPATQ14207 1427 aa15.91■□□□□ 0.14
PALM3-202ENST00000586368 CCDC141Q6ZP82 1450 aa15.91■□□□□ 0.14
PALM3-202ENST00000586368 DHX29Q7Z478 1369 aaKnown RBP15.89■□□□□ 0.13
PALM3-202ENST00000586368 KIF3BO15066 747 aa15.89■□□□□ 0.13
PALM3-202ENST00000586368 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
PALM3-202ENST00000586368 LRRC9Q6ZRR7 1453 aa15.89■□□□□ 0.13
PALM3-202ENST00000586368 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
PALM3-202ENST00000586368 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
PALM3-202ENST00000586368 TSPY4P0CV99 314 aa15.87■□□□□ 0.13
PALM3-202ENST00000586368 TSPY10P0CW01 314 aa15.87■□□□□ 0.13
PALM3-202ENST00000586368 CAMSAP1Q5T5Y3 1602 aa15.86■□□□□ 0.13
PALM3-202ENST00000586368 PTPRTO14522 1441 aa15.86■□□□□ 0.13
PALM3-202ENST00000586368 PTPRKQ15262 1439 aa15.86■□□□□ 0.13
PALM3-202ENST00000586368 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
PALM3-202ENST00000586368 NCKAP5LQ9HCH0 1330 aa15.86■□□□□ 0.13
PALM3-202ENST00000586368 MYO3AQ8NEV4 1616 aa15.83■□□□□ 0.13
PALM3-202ENST00000586368 WASHC2CQ9Y4E1 1318 aa15.83■□□□□ 0.12
PALM3-202ENST00000586368 ARHGEF5Q12774 1597 aa15.83■□□□□ 0.12
PALM3-202ENST00000586368 APLP2Q06481 763 aa15.81■□□□□ 0.12
PALM3-202ENST00000586368 FBXO31Q5XUX0 539 aaPredicted RBP15.81■□□□□ 0.12
PALM3-202ENST00000586368 CEP170BQ9Y4F5 1589 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms