RNA–Protein interactions for RNA: ENST00000586164.1

TCF3-207, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-207ENST00000586164 CDC42BPAQ5VT25 1732 aa28.84■■■□□ 2.21
TCF3-207ENST00000586164 SCAPERQ9BY12 1400 aa28.84■■■□□ 2.21
TCF3-207ENST00000586164 PREX2Q70Z35 1606 aa28.83■■■□□ 2.21
TCF3-207ENST00000586164 AEBP2Q6ZN18 517 aaPredicted RBP28.82■■■□□ 2.2
TCF3-207ENST00000586164 KDM4FA0A1W2PPD8 638 aa28.81■■■□□ 2.2
TCF3-207ENST00000586164 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
TCF3-207ENST00000586164 TIAM1Q13009 1591 aa28.78■■■□□ 2.2
TCF3-207ENST00000586164 GPATCH8Q9UKJ3 1502 aaKnown RBP28.76■■■□□ 2.19
TCF3-207ENST00000586164 POGZQ7Z3K3 1410 aa28.75■■■□□ 2.19
TCF3-207ENST00000586164 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
TCF3-207ENST00000586164 ZNF777Q9ULD5 760 aaPredicted RBP28.72■■■□□ 2.19
TCF3-207ENST00000586164 ZMYM4Q5VZL5 1548 aa28.71■■■□□ 2.19
TCF3-207ENST00000586164 ARHGEF12Q9NZN5 1544 aa28.69■■■□□ 2.18
TCF3-207ENST00000586164 AFAP1Q8N556 730 aa28.68■■■□□ 2.18
TCF3-207ENST00000586164 ABCC1P33527 1531 aa28.68■■■□□ 2.18
TCF3-207ENST00000586164 ARHGEF40Q8TER5 1519 aa28.68■■■□□ 2.18
TCF3-207ENST00000586164 CFDP1Q9UEE9 299 aaPredicted RBP28.67■■■□□ 2.18
TCF3-207ENST00000586164 YEATS2Q9ULM3 1422 aa28.67■■■□□ 2.18
TCF3-207ENST00000586164 LRRC9Q6ZRR7 1453 aa28.66■■■□□ 2.18
TCF3-207ENST00000586164 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
TCF3-207ENST00000586164 KANK4Q5T7N3 995 aaPredicted RBP28.66■■■□□ 2.18
TCF3-207ENST00000586164 SAMD9LQ8IVG5 1584 aa28.66■■■□□ 2.18
TCF3-207ENST00000586164 ZFYVE16Q7Z3T8 1539 aa28.65■■■□□ 2.18
TCF3-207ENST00000586164 ITSN2Q9NZM3 1697 aa28.65■■■□□ 2.18
TCF3-207ENST00000586164 NCOA2Q15596 1464 aa28.65■■■□□ 2.18
TCF3-207ENST00000586164 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
TCF3-207ENST00000586164 MAP3K1Q13233 1512 aa28.64■■■□□ 2.18
TCF3-207ENST00000586164 TRAPPC8Q9Y2L5 1435 aa28.63■■■□□ 2.17
TCF3-207ENST00000586164 MAGI2Q86UL8 1455 aa28.63■■■□□ 2.17
TCF3-207ENST00000586164 KDM5CP41229 1560 aa28.61■■■□□ 2.17
TCF3-207ENST00000586164 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.17
TCF3-207ENST00000586164 ARID4BQ4LE39 1312 aaPredicted RBP28.59■■■□□ 2.17
TCF3-207ENST00000586164 SYCP2Q9BX26 1530 aa28.59■■■□□ 2.17
TCF3-207ENST00000586164 APLP2Q06481 763 aa28.58■■■□□ 2.17
TCF3-207ENST00000586164 MYT1LQ9UL68 1186 aa28.57■■■□□ 2.16
TCF3-207ENST00000586164 ZNF644Q9H582 1327 aaPredicted RBP28.57■■■□□ 2.16
TCF3-207ENST00000586164 SIGLEC1Q9BZZ2 1709 aa28.55■■■□□ 2.16
TCF3-207ENST00000586164 HECW2Q9P2P5 1572 aa28.54■■■□□ 2.16
TCF3-207ENST00000586164 ATP10AO60312 1499 aa28.52■■■□□ 2.16
TCF3-207ENST00000586164 PLEKHH2Q8IVE3 1493 aa28.52■■■□□ 2.16
TCF3-207ENST00000586164 KIAA1107Q9UPP5 1409 aa28.52■■■□□ 2.16
TCF3-207ENST00000586164 MLH3Q9UHC1 1453 aa28.51■■■□□ 2.15
TCF3-207ENST00000586164 BCORL1Q5H9F3 1711 aa28.5■■■□□ 2.15
TCF3-207ENST00000586164 ADAMTSL3P82987 1691 aa28.48■■■□□ 2.15
TCF3-207ENST00000586164 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
TCF3-207ENST00000586164 ABCA6Q8N139 1617 aa28.47■■■□□ 2.15
TCF3-207ENST00000586164 DIP2CQ9Y2E4 1556 aa28.47■■■□□ 2.15
TCF3-207ENST00000586164 C9orf84Q5VXU9 1444 aa28.46■■■□□ 2.15
TCF3-207ENST00000586164 SPAG9O60271 1321 aaKnown RBP28.43■■■□□ 2.14
TCF3-207ENST00000586164 CAMSAP2Q08AD1 1489 aa28.43■■■□□ 2.14
TCF3-207ENST00000586164 MBD5Q9P267 1494 aa28.43■■■□□ 2.14
TCF3-207ENST00000586164 MLECQ14165 292 aa28.42■■■□□ 2.14
TCF3-207ENST00000586164 MADDQ8WXG6 1647 aa28.4■■■□□ 2.14
TCF3-207ENST00000586164 MYOM3Q5VTT5 1437 aa28.38■■■□□ 2.13
TCF3-207ENST00000586164 ATP7AQ04656 1500 aa28.37■■■□□ 2.13
TCF3-207ENST00000586164 INO80Q9ULG1 1556 aaPredicted RBP28.37■■■□□ 2.13
TCF3-207ENST00000586164 REREQ9P2R6 1566 aa28.35■■■□□ 2.13
TCF3-207ENST00000586164 PTPRMP28827 1452 aa28.34■■■□□ 2.13
TCF3-207ENST00000586164 RIMS1Q86UR5 1692 aaKnown RBP28.33■■■□□ 2.13
TCF3-207ENST00000586164 MIA2Q96PC5 1412 aa28.32■■■□□ 2.12
TCF3-207ENST00000586164 CCDC141Q6ZP82 1450 aa28.31■■■□□ 2.12
TCF3-207ENST00000586164 FER1L4A9Z1Z3 1794 aa28.29■■■□□ 2.12
TCF3-207ENST00000586164 ARHGEF5Q12774 1597 aa28.28■■■□□ 2.12
TCF3-207ENST00000586164 RSPH4AQ5TD94 716 aa28.28■■■□□ 2.12
TCF3-207ENST00000586164 AGLP35573 1532 aa28.27■■■□□ 2.12
TCF3-207ENST00000586164 RTEL1-TNFRSF6BF6WH68 1400 aa28.25■■■□□ 2.11
TCF3-207ENST00000586164 A2MP01023 1474 aa28.24■■■□□ 2.11
TCF3-207ENST00000586164 PLPPR3Q6T4P5 718 aa28.24■■■□□ 2.11
TCF3-207ENST00000586164 PTPN23Q9H3S7 1636 aa28.24■■■□□ 2.11
TCF3-207ENST00000586164 ADGBQ8N7X0 1667 aa28.23■■■□□ 2.11
TCF3-207ENST00000586164 FGD6Q6ZV73 1430 aa28.21■■■□□ 2.11
TCF3-207ENST00000586164 TSPY4P0CV99 314 aa28.21■■■□□ 2.11
TCF3-207ENST00000586164 TSPY10P0CW01 314 aa28.21■■■□□ 2.11
TCF3-207ENST00000586164 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
TCF3-207ENST00000586164 PLXNC1O60486 1568 aa28.2■■■□□ 2.11
TCF3-207ENST00000586164 TCOF1Q13428 1488 aaKnown RBP28.15■■■□□ 2.1
TCF3-207ENST00000586164 DHX29Q7Z478 1369 aaKnown RBP28.13■■■□□ 2.09
TCF3-207ENST00000586164 MAST1Q9Y2H9 1570 aa28.13■■■□□ 2.09
TCF3-207ENST00000586164 CEBPAP49715 358 aaPredicted RBP28.12■■■□□ 2.09
TCF3-207ENST00000586164 ABCC5O15440 1437 aa28.1■■■□□ 2.09
TCF3-207ENST00000586164 GGT6Q6P531 493 aa28.1■■■□□ 2.09
TCF3-207ENST00000586164 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
TCF3-207ENST00000586164 CROCC2H7BZ55 1655 aa28.09■■■□□ 2.09
TCF3-207ENST00000586164 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
TCF3-207ENST00000586164 FAM50AQ14320 339 aaKnown RBP28.07■■■□□ 2.08
TCF3-207ENST00000586164 DAPK1P53355 1430 aa28.07■■■□□ 2.08
TCF3-207ENST00000586164 KIF3BO15066 747 aa28.05■■■□□ 2.08
TCF3-207ENST00000586164 C3P01024 1663 aa28.04■■■□□ 2.08
TCF3-207ENST00000586164 SHANK2Q9UPX8 1470 aa28.02■■■□□ 2.08
TCF3-207ENST00000586164 CLTCQ00610 1675 aaKnown RBP28.02■■■□□ 2.08
TCF3-207ENST00000586164 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.08
TCF3-207ENST00000586164 CHIC2Q9UKJ5 165 aa28.01■■■□□ 2.07
TCF3-207ENST00000586164 RRP7BPQ9NSQ0 103 aa27.98■■■□□ 2.07
TCF3-207ENST00000586164 LMTK3Q96Q04 1460 aa27.97■■■□□ 2.07
TCF3-207ENST00000586164 MROH2AA6NES4 1674 aa27.97■■■□□ 2.07
TCF3-207ENST00000586164 ZMYM3Q14202 1370 aa27.96■■■□□ 2.07
TCF3-207ENST00000586164 KIF15Q9NS87 1388 aa27.95■■■□□ 2.06
TCF3-207ENST00000586164 DUOX2Q9NRD8 1548 aa27.94■■■□□ 2.06
TCF3-207ENST00000586164 PPP6R1Q9UPN7 881 aa27.94■■■□□ 2.06
TCF3-207ENST00000586164 SETD1BQ9UPS6 1966 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms