RNA–Protein interactions for RNA: ENST00000585951.1

CTDP1-203, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 3

Gene CTDP1, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-203ENST00000585951 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
CTDP1-203ENST00000585951 CDC42BPAQ5VT25 1732 aa31.39■■■□□ 2.62
CTDP1-203ENST00000585951 KDM4FA0A1W2PPD8 638 aa31.39■■■□□ 2.62
CTDP1-203ENST00000585951 MTUS2Q5JR59 1369 aa31.39■■■□□ 2.62
CTDP1-203ENST00000585951 SCAPERQ9BY12 1400 aa31.38■■■□□ 2.61
CTDP1-203ENST00000585951 ZMYM4Q5VZL5 1548 aa31.34■■■□□ 2.61
CTDP1-203ENST00000585951 EHBP1L1Q8N3D4 1523 aa31.34■■■□□ 2.61
CTDP1-203ENST00000585951 POGZQ7Z3K3 1410 aa31.33■■■□□ 2.61
CTDP1-203ENST00000585951 TIAM1Q13009 1591 aa31.3■■■□□ 2.6
CTDP1-203ENST00000585951 GPATCH8Q9UKJ3 1502 aaKnown RBP31.3■■■□□ 2.6
CTDP1-203ENST00000585951 ARHGEF40Q8TER5 1519 aa31.28■■■□□ 2.6
CTDP1-203ENST00000585951 MAGI2Q86UL8 1455 aa31.27■■■□□ 2.6
CTDP1-203ENST00000585951 ABCC1P33527 1531 aa31.24■■■□□ 2.59
CTDP1-203ENST00000585951 ZNF518AQ6AHZ1 1483 aa31.23■■■□□ 2.59
CTDP1-203ENST00000585951 CCNB3Q8WWL7 1395 aa31.23■■■□□ 2.59
CTDP1-203ENST00000585951 MAP3K1Q13233 1512 aa31.22■■■□□ 2.59
CTDP1-203ENST00000585951 ZFYVE16Q7Z3T8 1539 aa31.22■■■□□ 2.59
CTDP1-203ENST00000585951 KDM5CP41229 1560 aa31.21■■■□□ 2.59
CTDP1-203ENST00000585951 ARHGEF12Q9NZN5 1544 aa31.2■■■□□ 2.59
CTDP1-203ENST00000585951 ITSN2Q9NZM3 1697 aa31.2■■■□□ 2.59
CTDP1-203ENST00000585951 YEATS2Q9ULM3 1422 aa31.2■■■□□ 2.59
CTDP1-203ENST00000585951 SUPT6HQ7KZ85 1726 aaKnown RBP31.19■■■□□ 2.58
CTDP1-203ENST00000585951 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
CTDP1-203ENST00000585951 LRRC9Q6ZRR7 1453 aa31.17■■■□□ 2.58
CTDP1-203ENST00000585951 AFAP1Q8N556 730 aa31.17■■■□□ 2.58
CTDP1-203ENST00000585951 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
CTDP1-203ENST00000585951 ZNF777Q9ULD5 760 aaPredicted RBP31.15■■■□□ 2.58
CTDP1-203ENST00000585951 TRAPPC8Q9Y2L5 1435 aa31.15■■■□□ 2.58
CTDP1-203ENST00000585951 NCOA2Q15596 1464 aa31.14■■■□□ 2.58
CTDP1-203ENST00000585951 HECW2Q9P2P5 1572 aa31.11■■■□□ 2.57
CTDP1-203ENST00000585951 SYCP2Q9BX26 1530 aa31.1■■■□□ 2.57
CTDP1-203ENST00000585951 PLEKHH2Q8IVE3 1493 aa31.1■■■□□ 2.57
CTDP1-203ENST00000585951 KIAA1107Q9UPP5 1409 aa31.09■■■□□ 2.57
CTDP1-203ENST00000585951 BCORL1Q5H9F3 1711 aa31.09■■■□□ 2.57
CTDP1-203ENST00000585951 MLH3Q9UHC1 1453 aa31.08■■■□□ 2.57
CTDP1-203ENST00000585951 SIGLEC1Q9BZZ2 1709 aa31.08■■■□□ 2.57
CTDP1-203ENST00000585951 KANK4Q5T7N3 995 aaPredicted RBP31.08■■■□□ 2.57
CTDP1-203ENST00000585951 ADAMTSL3P82987 1691 aa31.07■■■□□ 2.56
CTDP1-203ENST00000585951 ARID4BQ4LE39 1312 aaPredicted RBP31.07■■■□□ 2.56
CTDP1-203ENST00000585951 ATP10AO60312 1499 aa31.07■■■□□ 2.56
CTDP1-203ENST00000585951 C9orf84Q5VXU9 1444 aa31.04■■■□□ 2.56
CTDP1-203ENST00000585951 HNRNPMP52272 730 aaKnown RBP eCLIP31.03■■■□□ 2.56
CTDP1-203ENST00000585951 DIP2CQ9Y2E4 1556 aa31.01■■■□□ 2.56
CTDP1-203ENST00000585951 APLP2Q06481 763 aa31.01■■■□□ 2.55
CTDP1-203ENST00000585951 MYT1LQ9UL68 1186 aa31.01■■■□□ 2.55
CTDP1-203ENST00000585951 KIDINS220Q9ULH0 1771 aa31.01■■■□□ 2.55
CTDP1-203ENST00000585951 ZNF644Q9H582 1327 aaPredicted RBP31■■■□□ 2.55
CTDP1-203ENST00000585951 ABCA6Q8N139 1617 aa31■■■□□ 2.55
CTDP1-203ENST00000585951 REREQ9P2R6 1566 aa30.96■■■□□ 2.55
CTDP1-203ENST00000585951 MBD5Q9P267 1494 aa30.95■■■□□ 2.55
CTDP1-203ENST00000585951 MADDQ8WXG6 1647 aa30.95■■■□□ 2.55
CTDP1-203ENST00000585951 CAMSAP2Q08AD1 1489 aa30.93■■■□□ 2.54
CTDP1-203ENST00000585951 SPAG9O60271 1321 aaKnown RBP30.93■■■□□ 2.54
CTDP1-203ENST00000585951 INO80Q9ULG1 1556 aaPredicted RBP30.91■■■□□ 2.54
CTDP1-203ENST00000585951 PTPRMP28827 1452 aa30.89■■■□□ 2.54
CTDP1-203ENST00000585951 ATP7AQ04656 1500 aa30.89■■■□□ 2.54
CTDP1-203ENST00000585951 MYOM3Q5VTT5 1437 aa30.88■■■□□ 2.53
CTDP1-203ENST00000585951 MIA2Q96PC5 1412 aa30.86■■■□□ 2.53
CTDP1-203ENST00000585951 RIMS1Q86UR5 1692 aaKnown RBP30.86■■■□□ 2.53
CTDP1-203ENST00000585951 AGLP35573 1532 aa30.85■■■□□ 2.53
CTDP1-203ENST00000585951 MLECQ14165 292 aa30.85■■■□□ 2.53
CTDP1-203ENST00000585951 CCDC141Q6ZP82 1450 aa30.83■■■□□ 2.53
CTDP1-203ENST00000585951 RSPH4AQ5TD94 716 aa30.83■■■□□ 2.53
CTDP1-203ENST00000585951 FER1L4A9Z1Z3 1794 aa30.83■■■□□ 2.53
CTDP1-203ENST00000585951 ARHGEF5Q12774 1597 aa30.82■■■□□ 2.52
CTDP1-203ENST00000585951 RTEL1-TNFRSF6BF6WH68 1400 aa30.81■■■□□ 2.52
CTDP1-203ENST00000585951 PLXNC1O60486 1568 aa30.76■■■□□ 2.52
CTDP1-203ENST00000585951 ADGBQ8N7X0 1667 aa30.76■■■□□ 2.51
CTDP1-203ENST00000585951 A2MP01023 1474 aa30.75■■■□□ 2.51
CTDP1-203ENST00000585951 PTPN23Q9H3S7 1636 aa30.69■■■□□ 2.5
CTDP1-203ENST00000585951 FGD6Q6ZV73 1430 aa30.68■■■□□ 2.5
CTDP1-203ENST00000585951 TSPY4P0CV99 314 aa30.68■■■□□ 2.5
CTDP1-203ENST00000585951 TSPY10P0CW01 314 aa30.68■■■□□ 2.5
CTDP1-203ENST00000585951 MAST1Q9Y2H9 1570 aa30.66■■■□□ 2.5
CTDP1-203ENST00000585951 TCOF1Q13428 1488 aaKnown RBP30.63■■■□□ 2.49
CTDP1-203ENST00000585951 DHX29Q7Z478 1369 aaKnown RBP30.63■■■□□ 2.49
CTDP1-203ENST00000585951 PLPPR3Q6T4P5 718 aa30.59■■■□□ 2.49
CTDP1-203ENST00000585951 CNTLNQ9NXG0 1405 aa30.57■■■□□ 2.48
CTDP1-203ENST00000585951 ESF1Q9H501 851 aaKnown RBP30.57■■■□□ 2.48
CTDP1-203ENST00000585951 CROCC2H7BZ55 1655 aa30.57■■■□□ 2.48
CTDP1-203ENST00000585951 ABCC5O15440 1437 aa30.56■■■□□ 2.48
CTDP1-203ENST00000585951 DNMT1P26358 1616 aaKnown RBP30.55■■■□□ 2.48
CTDP1-203ENST00000585951 SHANK2Q9UPX8 1470 aa30.55■■■□□ 2.48
CTDP1-203ENST00000585951 C3P01024 1663 aa30.55■■■□□ 2.48
CTDP1-203ENST00000585951 CEBPAP49715 358 aaPredicted RBP30.54■■■□□ 2.48
CTDP1-203ENST00000585951 DAPK1P53355 1430 aa30.53■■■□□ 2.48
CTDP1-203ENST00000585951 MROH2AA6NES4 1674 aa30.52■■■□□ 2.48
CTDP1-203ENST00000585951 LMTK3Q96Q04 1460 aa30.52■■■□□ 2.48
CTDP1-203ENST00000585951 GGT6Q6P531 493 aa30.52■■■□□ 2.48
CTDP1-203ENST00000585951 SETD1BQ9UPS6 1966 aaKnown RBP30.51■■■□□ 2.47
CTDP1-203ENST00000585951 PPP6R1Q9UPN7 881 aa30.5■■■□□ 2.47
CTDP1-203ENST00000585951 CLTCQ00610 1675 aaKnown RBP30.49■■■□□ 2.47
CTDP1-203ENST00000585951 KIF3BO15066 747 aa30.48■■■□□ 2.47
CTDP1-203ENST00000585951 ZMYM3Q14202 1370 aa30.44■■■□□ 2.46
CTDP1-203ENST00000585951 PREX1Q8TCU6 1659 aa30.44■■■□□ 2.46
CTDP1-203ENST00000585951 DUOX2Q9NRD8 1548 aa30.43■■■□□ 2.46
CTDP1-203ENST00000585951 EIF2AK4Q9P2K8 1649 aaKnown RBP30.43■■■□□ 2.46
CTDP1-203ENST00000585951 FAM50AQ14320 339 aaKnown RBP30.42■■■□□ 2.46
CTDP1-203ENST00000585951 PPARGC1BQ86YN6 1023 aaKnown RBP30.42■■■□□ 2.46
CTDP1-203ENST00000585951 KIF15Q9NS87 1388 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms