RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 RIMS1Q86UR5 1692 aaKnown RBP17.43■□□□□ 0.38
MBD3-203ENST00000585903 TROQ12816 1431 aaPredicted RBP17.43■□□□□ 0.38
MBD3-203ENST00000585903 CLIP1P30622 1438 aa17.42■□□□□ 0.38
MBD3-203ENST00000585903 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
MBD3-203ENST00000585903 ARID4BQ4LE39 1312 aaPredicted RBP17.41■□□□□ 0.38
MBD3-203ENST00000585903 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
MBD3-203ENST00000585903 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
MBD3-203ENST00000585903 ZNF518AQ6AHZ1 1483 aa17.38■□□□□ 0.37
MBD3-203ENST00000585903 LRRIQ1Q96JM4 1722 aa17.38■□□□□ 0.37
MBD3-203ENST00000585903 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
MBD3-203ENST00000585903 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
MBD3-203ENST00000585903 CERKQ8TCT0 537 aa17.37■□□□□ 0.37
MBD3-203ENST00000585903 KDM5CP41229 1560 aa17.36■□□□□ 0.37
MBD3-203ENST00000585903 SOCS7O14512 581 aa17.36■□□□□ 0.37
MBD3-203ENST00000585903 ILDR2Q71H61 639 aa17.36■□□□□ 0.37
MBD3-203ENST00000585903 ATP10AO60312 1499 aa17.36■□□□□ 0.37
MBD3-203ENST00000585903 C9orf84Q5VXU9 1444 aa17.35■□□□□ 0.37
MBD3-203ENST00000585903 SIGLEC1Q9BZZ2 1709 aa17.35■□□□□ 0.37
MBD3-203ENST00000585903 HSPA2P54652 639 aa17.34■□□□□ 0.37
MBD3-203ENST00000585903 REREQ9P2R6 1566 aa17.33■□□□□ 0.37
MBD3-203ENST00000585903 ARHGAP5Q13017 1502 aa17.33■□□□□ 0.37
MBD3-203ENST00000585903 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
MBD3-203ENST00000585903 ATP1B4Q9UN42 357 aaPredicted RBP17.33■□□□□ 0.36
MBD3-203ENST00000585903 FER1L4A9Z1Z3 1794 aa17.33■□□□□ 0.36
MBD3-203ENST00000585903 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
MBD3-203ENST00000585903 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
MBD3-203ENST00000585903 ARHGEF12Q9NZN5 1544 aa17.32■□□□□ 0.36
MBD3-203ENST00000585903 DISP3Q9P2K9 1392 aa17.3■□□□□ 0.36
MBD3-203ENST00000585903 MLH3Q9UHC1 1453 aa17.29■□□□□ 0.36
MBD3-203ENST00000585903 ABCC1P33527 1531 aa17.26■□□□□ 0.35
MBD3-203ENST00000585903 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
MBD3-203ENST00000585903 AGLP35573 1532 aa17.25■□□□□ 0.35
MBD3-203ENST00000585903 CDC42BPAQ5VT25 1732 aa17.24■□□□□ 0.35
MBD3-203ENST00000585903 SETD1BQ9UPS6 1966 aaKnown RBP17.24■□□□□ 0.35
MBD3-203ENST00000585903 DIP2CQ9Y2E4 1556 aa17.24■□□□□ 0.35
MBD3-203ENST00000585903 ITSN2Q9NZM3 1697 aa17.24■□□□□ 0.35
MBD3-203ENST00000585903 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
MBD3-203ENST00000585903 PREX1Q8TCU6 1659 aa17.23■□□□□ 0.35
MBD3-203ENST00000585903 STRCQ7RTU9 1775 aa17.21■□□□□ 0.35
MBD3-203ENST00000585903 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
MBD3-203ENST00000585903 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
MBD3-203ENST00000585903 KIDINS220Q9ULH0 1771 aa17.18■□□□□ 0.34
MBD3-203ENST00000585903 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
MBD3-203ENST00000585903 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
MBD3-203ENST00000585903 KIAA1107Q9UPP5 1409 aa17.17■□□□□ 0.34
MBD3-203ENST00000585903 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
MBD3-203ENST00000585903 MLECQ14165 292 aa17.16■□□□□ 0.34
MBD3-203ENST00000585903 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
MBD3-203ENST00000585903 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
MBD3-203ENST00000585903 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
MBD3-203ENST00000585903 UHRF1BP1Q6BDS2 1440 aa17.12■□□□□ 0.33
MBD3-203ENST00000585903 MROH2AA6NES4 1674 aa17.11■□□□□ 0.33
MBD3-203ENST00000585903 C3P01024 1663 aa17.11■□□□□ 0.33
MBD3-203ENST00000585903 MYT1LQ9UL68 1186 aa17.11■□□□□ 0.33
MBD3-203ENST00000585903 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
MBD3-203ENST00000585903 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
MBD3-203ENST00000585903 INO80Q9ULG1 1556 aaPredicted RBP17.09■□□□□ 0.33
MBD3-203ENST00000585903 EHBP1L1Q8N3D4 1523 aa17.08■□□□□ 0.32
MBD3-203ENST00000585903 MTUS2Q5JR59 1369 aa17.08■□□□□ 0.32
MBD3-203ENST00000585903 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
MBD3-203ENST00000585903 PLXNC1O60486 1568 aa17.07■□□□□ 0.32
MBD3-203ENST00000585903 ATP7AQ04656 1500 aa17.07■□□□□ 0.32
MBD3-203ENST00000585903 SPAG9O60271 1321 aaKnown RBP17.07■□□□□ 0.32
MBD3-203ENST00000585903 ESF1Q9H501 851 aaKnown RBP17.07■□□□□ 0.32
MBD3-203ENST00000585903 NPATQ14207 1427 aa17.06■□□□□ 0.32
MBD3-203ENST00000585903 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
MBD3-203ENST00000585903 LTBP4Q8N2S1 1624 aa17.06■□□□□ 0.32
MBD3-203ENST00000585903 PTPRTO14522 1441 aa17.05■□□□□ 0.32
MBD3-203ENST00000585903 CEP162Q5TB80 1403 aa17.05■□□□□ 0.32
MBD3-203ENST00000585903 CEBPAP49715 358 aaPredicted RBP17.05■□□□□ 0.32
MBD3-203ENST00000585903 IQSEC2Q5JU85 1478 aa17.05■□□□□ 0.32
MBD3-203ENST00000585903 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
MBD3-203ENST00000585903 PPP6R1Q9UPN7 881 aa17.04■□□□□ 0.32
MBD3-203ENST00000585903 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
MBD3-203ENST00000585903 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
MBD3-203ENST00000585903 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.32
MBD3-203ENST00000585903 A2MP01023 1474 aa17.01■□□□□ 0.31
MBD3-203ENST00000585903 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
MBD3-203ENST00000585903 SUPT6HQ7KZ85 1726 aaKnown RBP17■□□□□ 0.31
MBD3-203ENST00000585903 MBD5Q9P267 1494 aa16.99■□□□□ 0.31
MBD3-203ENST00000585903 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
MBD3-203ENST00000585903 RSPH4AQ5TD94 716 aa16.97■□□□□ 0.31
MBD3-203ENST00000585903 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
MBD3-203ENST00000585903 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
MBD3-203ENST00000585903 NCOA1Q15788 1441 aa16.96■□□□□ 0.3
MBD3-203ENST00000585903 CLTCQ00610 1675 aaKnown RBP16.94■□□□□ 0.3
MBD3-203ENST00000585903 NCOA2Q15596 1464 aa16.93■□□□□ 0.3
MBD3-203ENST00000585903 CCDC141Q6ZP82 1450 aa16.93■□□□□ 0.3
MBD3-203ENST00000585903 DHX29Q7Z478 1369 aaKnown RBP16.92■□□□□ 0.3
MBD3-203ENST00000585903 PLA2R1Q13018 1463 aa16.92■□□□□ 0.3
MBD3-203ENST00000585903 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
MBD3-203ENST00000585903 ARHGEF5Q12774 1597 aa16.91■□□□□ 0.3
MBD3-203ENST00000585903 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
MBD3-203ENST00000585903 MYO3AQ8NEV4 1616 aa16.91■□□□□ 0.3
MBD3-203ENST00000585903 CAMSAP1Q5T5Y3 1602 aa16.89■□□□□ 0.29
MBD3-203ENST00000585903 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
MBD3-203ENST00000585903 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
MBD3-203ENST00000585903 ZNF644Q9H582 1327 aaPredicted RBP16.89■□□□□ 0.29
MBD3-203ENST00000585903 CEP170BQ9Y4F5 1589 aaPredicted RBP16.88■□□□□ 0.29
MBD3-203ENST00000585903 PKD2Q13563 968 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms