RNA–Protein interactions for RNA: ENST00000585178.1

LAMA1-208, Transcript of laminin subunit alpha 1, humanhuman

TSL 3

Gene LAMA1, Length 541 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-208ENST00000585178 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
LAMA1-208ENST00000585178 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
LAMA1-208ENST00000585178 PREX2Q70Z35 1606 aa17.18■□□□□ 0.34
LAMA1-208ENST00000585178 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
LAMA1-208ENST00000585178 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 KDM5CP41229 1560 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 YEATS2Q9ULM3 1422 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 MADDQ8WXG6 1647 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 SIGLEC1Q9BZZ2 1709 aa17.16■□□□□ 0.34
LAMA1-208ENST00000585178 PTPRMP28827 1452 aa17.15■□□□□ 0.34
LAMA1-208ENST00000585178 ZNF518AQ6AHZ1 1483 aa17.14■□□□□ 0.33
LAMA1-208ENST00000585178 ABCC1P33527 1531 aa17.13■□□□□ 0.33
LAMA1-208ENST00000585178 EFCAB2Q5VUJ9 269 aa17.12■□□□□ 0.33
LAMA1-208ENST00000585178 CDC42BPBQ9Y5S2 1711 aa17.12■□□□□ 0.33
LAMA1-208ENST00000585178 C9orf84Q5VXU9 1444 aa17.09■□□□□ 0.33
LAMA1-208ENST00000585178 CDC42BPAQ5VT25 1732 aa17.09■□□□□ 0.33
LAMA1-208ENST00000585178 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.32
LAMA1-208ENST00000585178 REREQ9P2R6 1566 aa17.08■□□□□ 0.32
LAMA1-208ENST00000585178 RIMS1Q86UR5 1692 aaKnown RBP17.07■□□□□ 0.32
LAMA1-208ENST00000585178 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
LAMA1-208ENST00000585178 DIP2CQ9Y2E4 1556 aa17.06■□□□□ 0.32
LAMA1-208ENST00000585178 ATP10AO60312 1499 aa17.06■□□□□ 0.32
LAMA1-208ENST00000585178 ARID4BQ4LE39 1312 aaPredicted RBP17.06■□□□□ 0.32
LAMA1-208ENST00000585178 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
LAMA1-208ENST00000585178 MLH3Q9UHC1 1453 aa17.05■□□□□ 0.32
LAMA1-208ENST00000585178 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
LAMA1-208ENST00000585178 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
LAMA1-208ENST00000585178 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.32
LAMA1-208ENST00000585178 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
LAMA1-208ENST00000585178 GPATCH8Q9UKJ3 1502 aaKnown RBP17.02■□□□□ 0.32
LAMA1-208ENST00000585178 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
LAMA1-208ENST00000585178 TRAPPC8Q9Y2L5 1435 aa17.01■□□□□ 0.31
LAMA1-208ENST00000585178 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
LAMA1-208ENST00000585178 TIAM1Q13009 1591 aa16.98■□□□□ 0.31
LAMA1-208ENST00000585178 AGLP35573 1532 aa16.98■□□□□ 0.31
LAMA1-208ENST00000585178 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
LAMA1-208ENST00000585178 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
LAMA1-208ENST00000585178 KIDINS220Q9ULH0 1771 aa16.97■□□□□ 0.31
LAMA1-208ENST00000585178 PLEKHH2Q8IVE3 1493 aa16.96■□□□□ 0.31
LAMA1-208ENST00000585178 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.3
LAMA1-208ENST00000585178 INO80Q9ULG1 1556 aaPredicted RBP16.95■□□□□ 0.3
LAMA1-208ENST00000585178 CCNB3Q8WWL7 1395 aa16.93■□□□□ 0.3
LAMA1-208ENST00000585178 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
LAMA1-208ENST00000585178 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
LAMA1-208ENST00000585178 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
LAMA1-208ENST00000585178 MLECQ14165 292 aa16.89■□□□□ 0.29
LAMA1-208ENST00000585178 PREX1Q8TCU6 1659 aa16.88■□□□□ 0.29
LAMA1-208ENST00000585178 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
LAMA1-208ENST00000585178 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
LAMA1-208ENST00000585178 NCOA2Q15596 1464 aa16.86■□□□□ 0.29
LAMA1-208ENST00000585178 MBD5Q9P267 1494 aa16.86■□□□□ 0.29
LAMA1-208ENST00000585178 MYT1LQ9UL68 1186 aa16.85■□□□□ 0.29
LAMA1-208ENST00000585178 ZNF777Q9ULD5 760 aaPredicted RBP16.85■□□□□ 0.29
LAMA1-208ENST00000585178 SPAG9O60271 1321 aaKnown RBP16.84■□□□□ 0.29
LAMA1-208ENST00000585178 CNTLNQ9NXG0 1405 aa16.84■□□□□ 0.29
LAMA1-208ENST00000585178 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
LAMA1-208ENST00000585178 C3P01024 1663 aa16.84■□□□□ 0.29
LAMA1-208ENST00000585178 MROH2AA6NES4 1674 aa16.82■□□□□ 0.28
LAMA1-208ENST00000585178 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
LAMA1-208ENST00000585178 A2MP01023 1474 aa16.82■□□□□ 0.28
LAMA1-208ENST00000585178 LRRC9Q6ZRR7 1453 aa16.82■□□□□ 0.28
LAMA1-208ENST00000585178 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
LAMA1-208ENST00000585178 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
LAMA1-208ENST00000585178 CCDC141Q6ZP82 1450 aa16.8■□□□□ 0.28
LAMA1-208ENST00000585178 RTEL1-TNFRSF6BF6WH68 1400 aa16.79■□□□□ 0.28
LAMA1-208ENST00000585178 UHRF1BP1Q6BDS2 1440 aa16.79■□□□□ 0.28
LAMA1-208ENST00000585178 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
LAMA1-208ENST00000585178 ARHGEF5Q12774 1597 aa16.78■□□□□ 0.28
LAMA1-208ENST00000585178 LOC105371045A0A1W2PR82 267 aa16.78■□□□□ 0.28
LAMA1-208ENST00000585178 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
LAMA1-208ENST00000585178 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
LAMA1-208ENST00000585178 HSPA2P54652 639 aa16.76■□□□□ 0.27
LAMA1-208ENST00000585178 CEBPAP49715 358 aaPredicted RBP16.75■□□□□ 0.27
LAMA1-208ENST00000585178 NPATQ14207 1427 aa16.75■□□□□ 0.27
LAMA1-208ENST00000585178 CLTCQ00610 1675 aaKnown RBP16.73■□□□□ 0.27
LAMA1-208ENST00000585178 FAM135AQ9P2D6 1515 aa16.73■□□□□ 0.27
LAMA1-208ENST00000585178 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
LAMA1-208ENST00000585178 MAST1Q9Y2H9 1570 aa16.71■□□□□ 0.27
LAMA1-208ENST00000585178 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
LAMA1-208ENST00000585178 MYOM3Q5VTT5 1437 aa16.7■□□□□ 0.26
LAMA1-208ENST00000585178 MIA2Q96PC5 1412 aa16.7■□□□□ 0.26
LAMA1-208ENST00000585178 STRCQ7RTU9 1775 aa16.69■□□□□ 0.26
LAMA1-208ENST00000585178 ZNF142P52746 1687 aaPredicted RBP16.69■□□□□ 0.26
LAMA1-208ENST00000585178 DHX29Q7Z478 1369 aaKnown RBP16.69■□□□□ 0.26
LAMA1-208ENST00000585178 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
LAMA1-208ENST00000585178 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
LAMA1-208ENST00000585178 KDM5DQ9BY66 1539 aa16.67■□□□□ 0.26
LAMA1-208ENST00000585178 SETD1BQ9UPS6 1966 aaKnown RBP16.66■□□□□ 0.26
LAMA1-208ENST00000585178 PTPRKQ15262 1439 aa16.66■□□□□ 0.26
LAMA1-208ENST00000585178 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
LAMA1-208ENST00000585178 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
LAMA1-208ENST00000585178 PPP6R1Q9UPN7 881 aa16.65■□□□□ 0.26
LAMA1-208ENST00000585178 RNF17Q9BXT8 1623 aaKnown RBP16.64■□□□□ 0.25
LAMA1-208ENST00000585178 CEP170BQ9Y4F5 1589 aaPredicted RBP16.64■□□□□ 0.25
LAMA1-208ENST00000585178 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
LAMA1-208ENST00000585178 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
LAMA1-208ENST00000585178 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
LAMA1-208ENST00000585178 PTPRTO14522 1441 aa16.62■□□□□ 0.25
LAMA1-208ENST00000585178 SHANK2Q9UPX8 1470 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms