RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 RYDENQ9NUL5 291 aaKnown RBP12.84□□□□□ -0.35
NLK-206ENST00000584878 C2orf72A6NCS6 295 aa12.79□□□□□ -0.36
NLK-206ENST00000584878 ST18O60284 1047 aa12.78□□□□□ -0.36
NLK-206ENST00000584878 SNPHO15079 494 aa12.77□□□□□ -0.37
NLK-206ENST00000584878 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
NLK-206ENST00000584878 KIF3CO14782 793 aa12.76□□□□□ -0.37
NLK-206ENST00000584878 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
NLK-206ENST00000584878 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
NLK-206ENST00000584878 PAXIP1Q6ZW49 1069 aaPredicted RBP12.72□□□□□ -0.37
NLK-206ENST00000584878 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
NLK-206ENST00000584878 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
NLK-206ENST00000584878 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
NLK-206ENST00000584878 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
NLK-206ENST00000584878 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
NLK-206ENST00000584878 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
NLK-206ENST00000584878 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
NLK-206ENST00000584878 GPHNQ9NQX3 736 aaPredicted RBP12.66□□□□□ -0.38
NLK-206ENST00000584878 DSG2Q14126 1118 aa12.64□□□□□ -0.39
NLK-206ENST00000584878 CRISPLD2Q9H0B8 497 aa12.64□□□□□ -0.39
NLK-206ENST00000584878 FOXK1P85037 733 aa12.61□□□□□ -0.39
NLK-206ENST00000584878 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
NLK-206ENST00000584878 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
NLK-206ENST00000584878 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.391e-8■■■□□ 15
NLK-206ENST00000584878 EMP3P54852 163 aa12.58□□□□□ -0.4
NLK-206ENST00000584878 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
NLK-206ENST00000584878 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
NLK-206ENST00000584878 ARSIQ5FYB1 569 aa12.57□□□□□ -0.4
NLK-206ENST00000584878 PDE4AP27815 886 aa12.56□□□□□ -0.4
NLK-206ENST00000584878 PPP1R15BQ5SWA1 713 aa12.56□□□□□ -0.4
NLK-206ENST00000584878 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
NLK-206ENST00000584878 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
NLK-206ENST00000584878 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
NLK-206ENST00000584878 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
NLK-206ENST00000584878 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
NLK-206ENST00000584878 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
NLK-206ENST00000584878 SLC34A2O95436 690 aa12.51□□□□□ -0.41
NLK-206ENST00000584878 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
NLK-206ENST00000584878 MFSD10Q14728 455 aa12.5□□□□□ -0.41
NLK-206ENST00000584878 NUDT7P0C024 238 aa12.49□□□□□ -0.41
NLK-206ENST00000584878 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
NLK-206ENST00000584878 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
NLK-206ENST00000584878 TSHZ2Q9NRE2 1034 aa12.47□□□□□ -0.41
NLK-206ENST00000584878 ERBB3P21860 1342 aa12.45□□□□□ -0.42
NLK-206ENST00000584878 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
NLK-206ENST00000584878 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
NLK-206ENST00000584878 VARS2Q5ST30 1063 aaKnown RBP12.43□□□□□ -0.42
NLK-206ENST00000584878 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
NLK-206ENST00000584878 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
NLK-206ENST00000584878 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
NLK-206ENST00000584878 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
NLK-206ENST00000584878 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
NLK-206ENST00000584878 KDM4FA0A1W2PPD8 638 aa12.37□□□□□ -0.43
NLK-206ENST00000584878 TBC1D12O60347 775 aa12.35□□□□□ -0.43
NLK-206ENST00000584878 CAMK2BQ13554 666 aa12.33□□□□□ -0.44
NLK-206ENST00000584878 KRTAP3-3Q9BYR6 98 aa12.31□□□□□ -0.44
NLK-206ENST00000584878 KRTAP3-2Q9BYR7 98 aa12.31□□□□□ -0.44
NLK-206ENST00000584878 DPYSL4O14531 572 aa12.3□□□□□ -0.44
NLK-206ENST00000584878 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
NLK-206ENST00000584878 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
NLK-206ENST00000584878 EVI5O60447 810 aa12.29□□□□□ -0.44
NLK-206ENST00000584878 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
NLK-206ENST00000584878 HAP1P54257 671 aaPredicted RBP12.27□□□□□ -0.45
NLK-206ENST00000584878 E2F4Q16254 413 aa12.26□□□□□ -0.45
NLK-206ENST00000584878 POTEEQ6S8J3 1075 aa12.23□□□□□ -0.45
NLK-206ENST00000584878 ZNF454Q8N9F8 522 aa12.22□□□□□ -0.45
NLK-206ENST00000584878 AXIN2Q9Y2T1 843 aa12.22□□□□□ -0.45
NLK-206ENST00000584878 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
NLK-206ENST00000584878 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
NLK-206ENST00000584878 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
NLK-206ENST00000584878 FOSBP53539 338 aa12.17□□□□□ -0.46
NLK-206ENST00000584878 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
NLK-206ENST00000584878 KCNV2Q8TDN2 545 aa12.16□□□□□ -0.46
NLK-206ENST00000584878 SPNS2Q8IVW8 549 aa12.15□□□□□ -0.46
NLK-206ENST00000584878 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
NLK-206ENST00000584878 PSEN2P49810 448 aa12.14□□□□□ -0.47
NLK-206ENST00000584878 PDIA6Q15084 440 aa12.14□□□□□ -0.47
NLK-206ENST00000584878 DDX12PQ92771 950 aa12.13□□□□□ -0.47
NLK-206ENST00000584878 PCDHGA10Q9Y5H3 936 aa12.13□□□□□ -0.47
NLK-206ENST00000584878 LSM11P83369 360 aaKnown RBP eCLIP12.12□□□□□ -0.47
NLK-206ENST00000584878 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
NLK-206ENST00000584878 KCNK17Q96T54 332 aa12.12□□□□□ -0.47
NLK-206ENST00000584878 PBX2P40425 430 aa12.11□□□□□ -0.47
NLK-206ENST00000584878 ADAM33Q9BZ11 813 aa12.11□□□□□ -0.47
NLK-206ENST00000584878 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
NLK-206ENST00000584878 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
NLK-206ENST00000584878 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
NLK-206ENST00000584878 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
NLK-206ENST00000584878 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
NLK-206ENST00000584878 BCL2L12Q9HB09 334 aa12.08□□□□□ -0.48
NLK-206ENST00000584878 PHF14O94880 888 aa12.07□□□□□ -0.48
NLK-206ENST00000584878 SPDYE16A6NNV3 312 aaPredicted RBP12.06□□□□□ -0.48
NLK-206ENST00000584878 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
NLK-206ENST00000584878 PTGER2P43116 358 aa12.04□□□□□ -0.48
NLK-206ENST00000584878 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
NLK-206ENST00000584878 RBM33Q96EV2 1170 aaKnown RBP12.04□□□□□ -0.48
NLK-206ENST00000584878 NBR1Q14596 966 aa12.03□□□□□ -0.48
NLK-206ENST00000584878 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
NLK-206ENST00000584878 PTPREP23469 700 aa12.02□□□□□ -0.49
NLK-206ENST00000584878 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
NLK-206ENST00000584878 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms