RNA–Protein interactions for RNA: ENST00000584426.1

SLC46A1-205, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-205ENST00000584426 ADGRL1O94910 1474 aa27.47■■□□□ 1.99
SLC46A1-205ENST00000584426 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
SLC46A1-205ENST00000584426 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
SLC46A1-205ENST00000584426 KDM4FA0A1W2PPD8 638 aa27.45■■□□□ 1.98
SLC46A1-205ENST00000584426 TIAM1Q13009 1591 aa27.44■■□□□ 1.98
SLC46A1-205ENST00000584426 EFCAB2Q5VUJ9 269 aa27.43■■□□□ 1.98
SLC46A1-205ENST00000584426 SCAPERQ9BY12 1400 aa27.41■■□□□ 1.98
SLC46A1-205ENST00000584426 ZMYM4Q5VZL5 1548 aa27.39■■□□□ 1.98
SLC46A1-205ENST00000584426 POGZQ7Z3K3 1410 aa27.39■■□□□ 1.97
SLC46A1-205ENST00000584426 ARHGEF40Q8TER5 1519 aa27.36■■□□□ 1.97
SLC46A1-205ENST00000584426 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
SLC46A1-205ENST00000584426 ABCC1P33527 1531 aa27.35■■□□□ 1.97
SLC46A1-205ENST00000584426 ITSN2Q9NZM3 1697 aa27.33■■□□□ 1.97
SLC46A1-205ENST00000584426 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.96
SLC46A1-205ENST00000584426 SAMD9LQ8IVG5 1584 aa27.31■■□□□ 1.96
SLC46A1-205ENST00000584426 CCNB3Q8WWL7 1395 aa27.31■■□□□ 1.96
SLC46A1-205ENST00000584426 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
SLC46A1-205ENST00000584426 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
SLC46A1-205ENST00000584426 ARHGEF12Q9NZN5 1544 aa27.29■■□□□ 1.96
SLC46A1-205ENST00000584426 KDM5CP41229 1560 aa27.28■■□□□ 1.96
SLC46A1-205ENST00000584426 ZNF518AQ6AHZ1 1483 aa27.28■■□□□ 1.96
SLC46A1-205ENST00000584426 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
SLC46A1-205ENST00000584426 YEATS2Q9ULM3 1422 aa27.28■■□□□ 1.96
SLC46A1-205ENST00000584426 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
SLC46A1-205ENST00000584426 MAGI2Q86UL8 1455 aa27.25■■□□□ 1.95
SLC46A1-205ENST00000584426 ZNF777Q9ULD5 760 aaPredicted RBP27.24■■□□□ 1.95
SLC46A1-205ENST00000584426 SYCP2Q9BX26 1530 aa27.24■■□□□ 1.95
SLC46A1-205ENST00000584426 TRAPPC8Q9Y2L5 1435 aa27.23■■□□□ 1.95
SLC46A1-205ENST00000584426 HECW2Q9P2P5 1572 aa27.22■■□□□ 1.95
SLC46A1-205ENST00000584426 SIGLEC1Q9BZZ2 1709 aa27.22■■□□□ 1.95
SLC46A1-205ENST00000584426 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
SLC46A1-205ENST00000584426 CFDP1Q9UEE9 299 aaPredicted RBP27.22■■□□□ 1.95
SLC46A1-205ENST00000584426 KANK4Q5T7N3 995 aaPredicted RBP27.19■■□□□ 1.94
SLC46A1-205ENST00000584426 BCORL1Q5H9F3 1711 aa27.16■■□□□ 1.94
SLC46A1-205ENST00000584426 PLEKHH2Q8IVE3 1493 aa27.15■■□□□ 1.94
SLC46A1-205ENST00000584426 ABCA6Q8N139 1617 aa27.15■■□□□ 1.94
SLC46A1-205ENST00000584426 DIP2CQ9Y2E4 1556 aa27.14■■□□□ 1.94
SLC46A1-205ENST00000584426 ADAMTSL3P82987 1691 aa27.14■■□□□ 1.93
SLC46A1-205ENST00000584426 MLH3Q9UHC1 1453 aa27.13■■□□□ 1.93
SLC46A1-205ENST00000584426 KIAA1107Q9UPP5 1409 aa27.13■■□□□ 1.93
SLC46A1-205ENST00000584426 ARID4BQ4LE39 1312 aaPredicted RBP27.13■■□□□ 1.93
SLC46A1-205ENST00000584426 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
SLC46A1-205ENST00000584426 KIDINS220Q9ULH0 1771 aa27.12■■□□□ 1.93
SLC46A1-205ENST00000584426 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
SLC46A1-205ENST00000584426 ATP10AO60312 1499 aa27.12■■□□□ 1.93
SLC46A1-205ENST00000584426 C9orf84Q5VXU9 1444 aa27.1■■□□□ 1.93
SLC46A1-205ENST00000584426 APLP2Q06481 763 aa27.1■■□□□ 1.93
SLC46A1-205ENST00000584426 CAMSAP2Q08AD1 1489 aa27.09■■□□□ 1.93
SLC46A1-205ENST00000584426 MYT1LQ9UL68 1186 aa27.09■■□□□ 1.93
SLC46A1-205ENST00000584426 MADDQ8WXG6 1647 aa27.08■■□□□ 1.93
SLC46A1-205ENST00000584426 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
SLC46A1-205ENST00000584426 MBD5Q9P267 1494 aa27.05■■□□□ 1.92
SLC46A1-205ENST00000584426 ATP7AQ04656 1500 aa27.04■■□□□ 1.92
SLC46A1-205ENST00000584426 REREQ9P2R6 1566 aa27.04■■□□□ 1.92
SLC46A1-205ENST00000584426 MYOM3Q5VTT5 1437 aa27.02■■□□□ 1.92
SLC46A1-205ENST00000584426 SPAG9O60271 1321 aaKnown RBP27.01■■□□□ 1.91
SLC46A1-205ENST00000584426 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.91
SLC46A1-205ENST00000584426 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
SLC46A1-205ENST00000584426 CCDC141Q6ZP82 1450 aa26.97■■□□□ 1.91
SLC46A1-205ENST00000584426 ARHGEF5Q12774 1597 aa26.97■■□□□ 1.91
SLC46A1-205ENST00000584426 MLECQ14165 292 aa26.96■■□□□ 1.91
SLC46A1-205ENST00000584426 PTPRMP28827 1452 aa26.95■■□□□ 1.91
SLC46A1-205ENST00000584426 MIA2Q96PC5 1412 aa26.95■■□□□ 1.9
SLC46A1-205ENST00000584426 AGLP35573 1532 aa26.93■■□□□ 1.9
SLC46A1-205ENST00000584426 ADGBQ8N7X0 1667 aa26.92■■□□□ 1.9
SLC46A1-205ENST00000584426 PLXNC1O60486 1568 aa26.91■■□□□ 1.9
SLC46A1-205ENST00000584426 PTPN23Q9H3S7 1636 aa26.9■■□□□ 1.9
SLC46A1-205ENST00000584426 RTEL1-TNFRSF6BF6WH68 1400 aa26.88■■□□□ 1.89
SLC46A1-205ENST00000584426 A2MP01023 1474 aa26.87■■□□□ 1.89
SLC46A1-205ENST00000584426 FGD6Q6ZV73 1430 aa26.86■■□□□ 1.89
SLC46A1-205ENST00000584426 RSPH4AQ5TD94 716 aa26.83■■□□□ 1.89
SLC46A1-205ENST00000584426 MAST1Q9Y2H9 1570 aa26.83■■□□□ 1.89
SLC46A1-205ENST00000584426 CROCC2H7BZ55 1655 aa26.82■■□□□ 1.88
SLC46A1-205ENST00000584426 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
SLC46A1-205ENST00000584426 PLPPR3Q6T4P5 718 aa26.77■■□□□ 1.88
SLC46A1-205ENST00000584426 DNMT1P26358 1616 aaKnown RBP26.76■■□□□ 1.87
SLC46A1-205ENST00000584426 TSPY4P0CV99 314 aa26.76■■□□□ 1.87
SLC46A1-205ENST00000584426 TSPY10P0CW01 314 aa26.76■■□□□ 1.87
SLC46A1-205ENST00000584426 ABCC5O15440 1437 aa26.73■■□□□ 1.87
SLC46A1-205ENST00000584426 DHX29Q7Z478 1369 aaKnown RBP26.73■■□□□ 1.87
SLC46A1-205ENST00000584426 C3P01024 1663 aa26.73■■□□□ 1.87
SLC46A1-205ENST00000584426 PPARGC1BQ86YN6 1023 aaKnown RBP26.72■■□□□ 1.87
SLC46A1-205ENST00000584426 SHANK2Q9UPX8 1470 aa26.72■■□□□ 1.87
SLC46A1-205ENST00000584426 DAPK1P53355 1430 aa26.72■■□□□ 1.87
SLC46A1-205ENST00000584426 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.86
SLC46A1-205ENST00000584426 MROH2AA6NES4 1674 aa26.69■■□□□ 1.86
SLC46A1-205ENST00000584426 CEBPAP49715 358 aaPredicted RBP26.67■■□□□ 1.86
SLC46A1-205ENST00000584426 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
SLC46A1-205ENST00000584426 ESF1Q9H501 851 aaKnown RBP26.66■■□□□ 1.86
SLC46A1-205ENST00000584426 GGT6Q6P531 493 aa26.65■■□□□ 1.86
SLC46A1-205ENST00000584426 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.86
SLC46A1-205ENST00000584426 FAM50AQ14320 339 aaKnown RBP26.63■■□□□ 1.85
SLC46A1-205ENST00000584426 EIF2AK4Q9P2K8 1649 aaKnown RBP26.62■■□□□ 1.85
SLC46A1-205ENST00000584426 KIF3BO15066 747 aa26.62■■□□□ 1.85
SLC46A1-205ENST00000584426 DUOX2Q9NRD8 1548 aa26.61■■□□□ 1.85
SLC46A1-205ENST00000584426 PREX1Q8TCU6 1659 aa26.61■■□□□ 1.85
SLC46A1-205ENST00000584426 RNF17Q9BXT8 1623 aaKnown RBP26.6■■□□□ 1.85
SLC46A1-205ENST00000584426 KIF15Q9NS87 1388 aa26.58■■□□□ 1.85
SLC46A1-205ENST00000584426 KDM5DQ9BY66 1539 aa26.56■■□□□ 1.84
SLC46A1-205ENST00000584426 CHIC2Q9UKJ5 165 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms