RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 NCOA2Q15596 1464 aa17■□□□□ 0.31
PSMD11-210ENST00000584340 AKNAQ7Z591 1439 aa17■□□□□ 0.31
PSMD11-210ENST00000584340 FRMPD1Q5SYB0 1578 aa16.99■□□□□ 0.31
PSMD11-210ENST00000584340 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
PSMD11-210ENST00000584340 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
PSMD11-210ENST00000584340 RICTORQ6R327 1708 aa16.96■□□□□ 0.3
PSMD11-210ENST00000584340 CFAP74Q9C0B2 1584 aa16.95■□□□□ 0.3
PSMD11-210ENST00000584340 EFCAB2Q5VUJ9 269 aa16.95■□□□□ 0.3
PSMD11-210ENST00000584340 SAMD9LQ8IVG5 1584 aa16.94■□□□□ 0.3
PSMD11-210ENST00000584340 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
PSMD11-210ENST00000584340 RAPGEF3O95398 923 aa16.93■□□□□ 0.3
PSMD11-210ENST00000584340 ABCC1P33527 1531 aa16.91■□□□□ 0.3
PSMD11-210ENST00000584340 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
PSMD11-210ENST00000584340 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
PSMD11-210ENST00000584340 ADGRL1O94910 1474 aa16.91■□□□□ 0.3
PSMD11-210ENST00000584340 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
PSMD11-210ENST00000584340 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
PSMD11-210ENST00000584340 DENND4BO75064 1496 aaPredicted RBP16.89■□□□□ 0.29
PSMD11-210ENST00000584340 MBD5Q9P267 1494 aa16.89■□□□□ 0.29
PSMD11-210ENST00000584340 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
PSMD11-210ENST00000584340 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
PSMD11-210ENST00000584340 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
PSMD11-210ENST00000584340 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
PSMD11-210ENST00000584340 KDM5CP41229 1560 aa16.87■□□□□ 0.29
PSMD11-210ENST00000584340 CFDP1Q9UEE9 299 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-210ENST00000584340 MYOM3Q5VTT5 1437 aa16.86■□□□□ 0.29
PSMD11-210ENST00000584340 AFAP1Q8N556 730 aa16.85■□□□□ 0.29
PSMD11-210ENST00000584340 APLP2Q06481 763 aa16.84■□□□□ 0.29
PSMD11-210ENST00000584340 MIA2Q96PC5 1412 aa16.84■□□□□ 0.29
PSMD11-210ENST00000584340 SYCP2Q9BX26 1530 aa16.83■□□□□ 0.28
PSMD11-210ENST00000584340 HNRNPMP52272 730 aaKnown RBP eCLIP16.82■□□□□ 0.28
PSMD11-210ENST00000584340 SIGLEC1Q9BZZ2 1709 aa16.82■□□□□ 0.28
PSMD11-210ENST00000584340 CAMSAP2Q08AD1 1489 aa16.81■□□□□ 0.28
PSMD11-210ENST00000584340 ZNF518AQ6AHZ1 1483 aa16.81■□□□□ 0.28
PSMD11-210ENST00000584340 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
PSMD11-210ENST00000584340 ZNF777Q9ULD5 760 aaPredicted RBP16.8■□□□□ 0.28
PSMD11-210ENST00000584340 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
PSMD11-210ENST00000584340 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
PSMD11-210ENST00000584340 PLEKHH2Q8IVE3 1493 aa16.8■□□□□ 0.28
PSMD11-210ENST00000584340 MLH3Q9UHC1 1453 aa16.8■□□□□ 0.28
PSMD11-210ENST00000584340 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
PSMD11-210ENST00000584340 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
PSMD11-210ENST00000584340 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
PSMD11-210ENST00000584340 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.28
PSMD11-210ENST00000584340 PTPN23Q9H3S7 1636 aa16.77■□□□□ 0.27
PSMD11-210ENST00000584340 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
PSMD11-210ENST00000584340 HECW2Q9P2P5 1572 aa16.75■□□□□ 0.27
PSMD11-210ENST00000584340 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
PSMD11-210ENST00000584340 ZFYVE16Q7Z3T8 1539 aa16.74■□□□□ 0.27
PSMD11-210ENST00000584340 ABCA6Q8N139 1617 aa16.74■□□□□ 0.27
PSMD11-210ENST00000584340 DIP2CQ9Y2E4 1556 aa16.73■□□□□ 0.27
PSMD11-210ENST00000584340 ABCC5O15440 1437 aa16.71■□□□□ 0.27
PSMD11-210ENST00000584340 ATP10AO60312 1499 aa16.71■□□□□ 0.27
PSMD11-210ENST00000584340 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
PSMD11-210ENST00000584340 RTEL1-TNFRSF6BF6WH68 1400 aa16.7■□□□□ 0.26
PSMD11-210ENST00000584340 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
PSMD11-210ENST00000584340 RSPH4AQ5TD94 716 aa16.7■□□□□ 0.26
PSMD11-210ENST00000584340 ATP7AQ04656 1500 aa16.7■□□□□ 0.26
PSMD11-210ENST00000584340 MAST1Q9Y2H9 1570 aa16.69■□□□□ 0.26
PSMD11-210ENST00000584340 KDM4FA0A1W2PPD8 638 aa16.69■□□□□ 0.26
PSMD11-210ENST00000584340 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
PSMD11-210ENST00000584340 RRBP1Q9P2E9 1410 aaKnown RBP16.68■□□□□ 0.26
PSMD11-210ENST00000584340 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
PSMD11-210ENST00000584340 CROCC2H7BZ55 1655 aa16.67■□□□□ 0.26
PSMD11-210ENST00000584340 PTPRKQ15262 1439 aa16.67■□□□□ 0.26
PSMD11-210ENST00000584340 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.66■□□□□ 0.26
PSMD11-210ENST00000584340 PLXNC1O60486 1568 aa16.66■□□□□ 0.26
PSMD11-210ENST00000584340 DAPK1P53355 1430 aa16.66■□□□□ 0.26
PSMD11-210ENST00000584340 C9orf84Q5VXU9 1444 aa16.65■□□□□ 0.26
PSMD11-210ENST00000584340 ADGBQ8N7X0 1667 aa16.65■□□□□ 0.26
PSMD11-210ENST00000584340 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
PSMD11-210ENST00000584340 AGLP35573 1532 aa16.64■□□□□ 0.25
PSMD11-210ENST00000584340 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
PSMD11-210ENST00000584340 BCORL1Q5H9F3 1711 aa16.63■□□□□ 0.25
PSMD11-210ENST00000584340 A2MP01023 1474 aa16.6■□□□□ 0.25
PSMD11-210ENST00000584340 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
PSMD11-210ENST00000584340 ADGRL2O95490 1459 aa16.59■□□□□ 0.25
PSMD11-210ENST00000584340 TSPY4P0CV99 314 aa16.58■□□□□ 0.24
PSMD11-210ENST00000584340 TSPY10P0CW01 314 aa16.58■□□□□ 0.24
PSMD11-210ENST00000584340 NCOA1Q15788 1441 aa16.58■□□□□ 0.24
PSMD11-210ENST00000584340 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
PSMD11-210ENST00000584340 MADDQ8WXG6 1647 aa16.53■□□□□ 0.24
PSMD11-210ENST00000584340 CHIC2Q9UKJ5 165 aa16.52■□□□□ 0.24
PSMD11-210ENST00000584340 DUOX2Q9NRD8 1548 aa16.51■□□□□ 0.23
PSMD11-210ENST00000584340 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
PSMD11-210ENST00000584340 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
PSMD11-210ENST00000584340 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
PSMD11-210ENST00000584340 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
PSMD11-210ENST00000584340 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
PSMD11-210ENST00000584340 ARID4BQ4LE39 1312 aaPredicted RBP16.49■□□□□ 0.23
PSMD11-210ENST00000584340 RNF17Q9BXT8 1623 aaKnown RBP16.48■□□□□ 0.23
PSMD11-210ENST00000584340 EIF2AK4Q9P2K8 1649 aaKnown RBP16.48■□□□□ 0.23
PSMD11-210ENST00000584340 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
PSMD11-210ENST00000584340 FER1L4A9Z1Z3 1794 aa16.47■□□□□ 0.23
PSMD11-210ENST00000584340 MLECQ14165 292 aa16.47■□□□□ 0.23
PSMD11-210ENST00000584340 PTPRMP28827 1452 aa16.47■□□□□ 0.23
PSMD11-210ENST00000584340 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
PSMD11-210ENST00000584340 DEPDC5O75140 1603 aa16.45■□□□□ 0.22
PSMD11-210ENST00000584340 KIF3BO15066 747 aa16.45■□□□□ 0.22
PSMD11-210ENST00000584340 RIMS1Q86UR5 1692 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms