RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, humanhuman

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-209ENST00000584130 CDAN1Q8IWY9 1227 aa12.27□□□□□ -0.45
RIOK3-209ENST00000584130 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
RIOK3-209ENST00000584130 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
RIOK3-209ENST00000584130 DNAJC5Q9H3Z4 198 aa12.25□□□□□ -0.45
RIOK3-209ENST00000584130 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
RIOK3-209ENST00000584130 PPP1R37O75864 691 aa12.22□□□□□ -0.45
RIOK3-209ENST00000584130 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
RIOK3-209ENST00000584130 KIF3CO14782 793 aa12.2□□□□□ -0.46
RIOK3-209ENST00000584130 NKX1-1Q15270 411 aaPredicted RBP12.2□□□□□ -0.46
RIOK3-209ENST00000584130 ZSWIM6Q9HCJ5 1215 aa12.19□□□□□ -0.46
RIOK3-209ENST00000584130 C2orf72A6NCS6 295 aa12.18□□□□□ -0.46
RIOK3-209ENST00000584130 HS3ST6Q96QI5 342 aa12.17□□□□□ -0.46
RIOK3-209ENST00000584130 FAM205CA6NFA0 338 aa12.16□□□□□ -0.46
RIOK3-209ENST00000584130 TMC2Q8TDI7 906 aa12.15□□□□□ -0.46
RIOK3-209ENST00000584130 RYDENQ9NUL5 291 aaKnown RBP12.15□□□□□ -0.46
RIOK3-209ENST00000584130 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
RIOK3-209ENST00000584130 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
RIOK3-209ENST00000584130 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
RIOK3-209ENST00000584130 ERBB3P21860 1342 aa12.09□□□□□ -0.47
RIOK3-209ENST00000584130 ARSIQ5FYB1 569 aa12.06□□□□□ -0.48
RIOK3-209ENST00000584130 VARS2Q5ST30 1063 aaKnown RBP12.04□□□□□ -0.48
RIOK3-209ENST00000584130 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
RIOK3-209ENST00000584130 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
RIOK3-209ENST00000584130 SLC34A2O95436 690 aa12.03□□□□□ -0.48
RIOK3-209ENST00000584130 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
RIOK3-209ENST00000584130 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
RIOK3-209ENST00000584130 FOXK1P85037 733 aa12.01□□□□□ -0.49
RIOK3-209ENST00000584130 BBXQ8WY36 941 aaPredicted RBP12.01□□□□□ -0.49
RIOK3-209ENST00000584130 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
RIOK3-209ENST00000584130 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
RIOK3-209ENST00000584130 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
RIOK3-209ENST00000584130 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
RIOK3-209ENST00000584130 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
RIOK3-209ENST00000584130 DSG2Q14126 1118 aa11.97□□□□□ -0.49
RIOK3-209ENST00000584130 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
RIOK3-209ENST00000584130 NUDT7P0C024 238 aa11.96□□□□□ -0.49
RIOK3-209ENST00000584130 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.49
RIOK3-209ENST00000584130 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
RIOK3-209ENST00000584130 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
RIOK3-209ENST00000584130 PTCD2Q8WV60 388 aaKnown RBP11.92□□□□□ -0.5
RIOK3-209ENST00000584130 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
RIOK3-209ENST00000584130 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
RIOK3-209ENST00000584130 NCKAP5LQ9HCH0 1330 aa11.9□□□□□ -0.5
RIOK3-209ENST00000584130 PPP1R15BQ5SWA1 713 aa11.88□□□□□ -0.51
RIOK3-209ENST00000584130 PAXIP1Q6ZW49 1069 aaPredicted RBP11.88□□□□□ -0.51
RIOK3-209ENST00000584130 LHX6Q9UPM6 363 aa11.88□□□□□ -0.51
RIOK3-209ENST00000584130 PDE4AP27815 886 aa11.86□□□□□ -0.51
RIOK3-209ENST00000584130 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
RIOK3-209ENST00000584130 CFAP44Q96MT7 982 aa11.85□□□□□ -0.51
RIOK3-209ENST00000584130 SPRYD3Q8NCJ5 442 aa11.83□□□□□ -0.52
RIOK3-209ENST00000584130 PSDA5PKW4 1024 aaPredicted RBP11.82□□□□□ -0.52
RIOK3-209ENST00000584130 TBC1D12O60347 775 aa11.82□□□□□ -0.52
RIOK3-209ENST00000584130 OXER1Q8TDS5 423 aa11.82□□□□□ -0.52
RIOK3-209ENST00000584130 PBX2P40425 430 aa11.81□□□□□ -0.52
RIOK3-209ENST00000584130 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
RIOK3-209ENST00000584130 MFSD10Q14728 455 aa11.8□□□□□ -0.52
RIOK3-209ENST00000584130 UPF1Q92900 1129 aaKnown RBP eCLIP11.8□□□□□ -0.52
RIOK3-209ENST00000584130 LARP6Q9BRS8 491 aaKnown RBP11.8□□□□□ -0.52
RIOK3-209ENST00000584130 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
RIOK3-209ENST00000584130 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
RIOK3-209ENST00000584130 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
RIOK3-209ENST00000584130 POTEEQ6S8J3 1075 aa11.75□□□□□ -0.53
RIOK3-209ENST00000584130 PTGER2P43116 358 aa11.73□□□□□ -0.53
RIOK3-209ENST00000584130 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
RIOK3-209ENST00000584130 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
RIOK3-209ENST00000584130 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
RIOK3-209ENST00000584130 TSHZ2Q9NRE2 1034 aa11.7□□□□□ -0.54
RIOK3-209ENST00000584130 MYT1LQ9UL68 1186 aa11.7□□□□□ -0.54
RIOK3-209ENST00000584130 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
RIOK3-209ENST00000584130 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
RIOK3-209ENST00000584130 EMILIN3Q9NT22 766 aa11.68□□□□□ -0.54
RIOK3-209ENST00000584130 EVI5O60447 810 aa11.65□□□□□ -0.54
RIOK3-209ENST00000584130 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
RIOK3-209ENST00000584130 PSEN2P49810 448 aa11.63□□□□□ -0.55
RIOK3-209ENST00000584130 FOSBP53539 338 aa11.63□□□□□ -0.55
RIOK3-209ENST00000584130 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
RIOK3-209ENST00000584130 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
RIOK3-209ENST00000584130 JPH4Q96JJ6 628 aa11.63□□□□□ -0.55
RIOK3-209ENST00000584130 ANO8Q9HCE9 1232 aaPredicted RBP11.63□□□□□ -0.55
RIOK3-209ENST00000584130 ADGRD1Q6QNK2 874 aa11.62□□□□□ -0.55
RIOK3-209ENST00000584130 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
RIOK3-209ENST00000584130 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
RIOK3-209ENST00000584130 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
RIOK3-209ENST00000584130 KDM2AQ9Y2K7 1162 aa11.61□□□□□ -0.55
RIOK3-209ENST00000584130 TK2O00142 265 aa11.6□□□□□ -0.55
RIOK3-209ENST00000584130 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
RIOK3-209ENST00000584130 BCL2L12Q9HB09 334 aa11.6□□□□□ -0.55
RIOK3-209ENST00000584130 DPYSL4O14531 572 aa11.55□□□□□ -0.56
RIOK3-209ENST00000584130 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
RIOK3-209ENST00000584130 HRO43593 1189 aa11.53□□□□□ -0.56
RIOK3-209ENST00000584130 PTPREP23469 700 aa11.53□□□□□ -0.56
RIOK3-209ENST00000584130 ADAM33Q9BZ11 813 aa11.53□□□□□ -0.56
RIOK3-209ENST00000584130 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
RIOK3-209ENST00000584130 SLC4A5Q9BY07 1137 aa11.49□□□□□ -0.57
RIOK3-209ENST00000584130 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
RIOK3-209ENST00000584130 PHF14O94880 888 aa11.48□□□□□ -0.57
RIOK3-209ENST00000584130 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
RIOK3-209ENST00000584130 FBXW7Q969H0 707 aa11.47□□□□□ -0.57
RIOK3-209ENST00000584130 PDIA6Q15084 440 aa11.46□□□□□ -0.57
RIOK3-209ENST00000584130 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms