RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 IRX6P78412 446 aaPredicted RBP11.92□□□□□ -0.5
BDNF-219ENST00000584049 ANKRD30BQ9BXX2 1392 aa11.91□□□□□ -0.5
BDNF-219ENST00000584049 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
BDNF-219ENST00000584049 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
BDNF-219ENST00000584049 WDR62O43379 1518 aa11.9□□□□□ -0.5
BDNF-219ENST00000584049 MRS2Q9HD23 443 aa11.9□□□□□ -0.5
BDNF-219ENST00000584049 IQGAP2Q13576 1575 aa11.9□□□□□ -0.51
BDNF-219ENST00000584049 DNMT1P26358 1616 aaKnown RBP11.89□□□□□ -0.51
BDNF-219ENST00000584049 CCDC184Q52MB2 194 aa11.89□□□□□ -0.51
BDNF-219ENST00000584049 SMG6Q86US8 1419 aaKnown RBP11.88□□□□□ -0.51
BDNF-219ENST00000584049 CHIC2Q9UKJ5 165 aa11.88□□□□□ -0.51
BDNF-219ENST00000584049 TARBP1Q13395 1621 aaKnown RBP11.87□□□□□ -0.51
BDNF-219ENST00000584049 DAPK1P53355 1430 aa11.87□□□□□ -0.51
BDNF-219ENST00000584049 C11orf95C9JLR9 678 aaPredicted RBP11.87□□□□□ -0.51
BDNF-219ENST00000584049 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
BDNF-219ENST00000584049 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
BDNF-219ENST00000584049 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
BDNF-219ENST00000584049 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
BDNF-219ENST00000584049 CDK13Q14004 1512 aaKnown RBP11.85□□□□□ -0.51
BDNF-219ENST00000584049 RNF123Q5XPI4 1314 aa11.85□□□□□ -0.51
BDNF-219ENST00000584049 NBPF8Q3BBV2 869 aa11.84□□□□□ -0.51
BDNF-219ENST00000584049 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
BDNF-219ENST00000584049 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
BDNF-219ENST00000584049 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
BDNF-219ENST00000584049 ABCC5O15440 1437 aa11.83□□□□□ -0.52
BDNF-219ENST00000584049 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
BDNF-219ENST00000584049 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
BDNF-219ENST00000584049 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
BDNF-219ENST00000584049 KIF14Q15058 1648 aa11.81□□□□□ -0.52
BDNF-219ENST00000584049 ADGBQ8N7X0 1667 aa11.8□□□□□ -0.52
BDNF-219ENST00000584049 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
BDNF-219ENST00000584049 PZPP20742 1482 aa11.8□□□□□ -0.52
BDNF-219ENST00000584049 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
BDNF-219ENST00000584049 FOXD1Q16676 465 aa11.78□□□□□ -0.52
BDNF-219ENST00000584049 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
BDNF-219ENST00000584049 KDM5CP41229 1560 aa11.78□□□□□ -0.52
BDNF-219ENST00000584049 ADGRL2O95490 1459 aa11.78□□□□□ -0.52
BDNF-219ENST00000584049 BCORL1Q5H9F3 1711 aa11.77□□□□□ -0.53
BDNF-219ENST00000584049 ITSN2Q9NZM3 1697 aa11.77□□□□□ -0.53
BDNF-219ENST00000584049 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.53
BDNF-219ENST00000584049 KIAA0556O60303 1618 aa11.77□□□□□ -0.53
BDNF-219ENST00000584049 USP47Q96K76 1375 aa11.76□□□□□ -0.53
BDNF-219ENST00000584049 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
BDNF-219ENST00000584049 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
BDNF-219ENST00000584049 NUP153P49790 1475 aaKnown RBP11.75□□□□□ -0.53
BDNF-219ENST00000584049 KTN1Q86UP2 1357 aaKnown RBP11.75□□□□□ -0.53
BDNF-219ENST00000584049 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
BDNF-219ENST00000584049 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
BDNF-219ENST00000584049 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
BDNF-219ENST00000584049 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
BDNF-219ENST00000584049 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
BDNF-219ENST00000584049 CCDC136Q96JN2 1154 aa11.73□□□□□ -0.53
BDNF-219ENST00000584049 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
BDNF-219ENST00000584049 CAMSAP2Q08AD1 1489 aa11.73□□□□□ -0.53
BDNF-219ENST00000584049 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
BDNF-219ENST00000584049 DISP1Q96F81 1524 aa11.73□□□□□ -0.53
BDNF-219ENST00000584049 LRPPRCP42704 1394 aaKnown RBP11.72□□□□□ -0.53
BDNF-219ENST00000584049 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
BDNF-219ENST00000584049 PNISRQ8TF01 805 aaKnown RBP11.71□□□□□ -0.53
BDNF-219ENST00000584049 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
BDNF-219ENST00000584049 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
BDNF-219ENST00000584049 BRD4O60885 1362 aaPredicted RBP11.71□□□□□ -0.54
BDNF-219ENST00000584049 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
BDNF-219ENST00000584049 E9PCH4 1651 aa11.69□□□□□ -0.54
BDNF-219ENST00000584049 KDM5DQ9BY66 1539 aa11.69□□□□□ -0.54
BDNF-219ENST00000584049 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
BDNF-219ENST00000584049 ANKRD30AQ9BXX3 1397 aa11.68□□□□□ -0.54
BDNF-219ENST00000584049 SHANK2Q9UPX8 1470 aa11.68□□□□□ -0.54
BDNF-219ENST00000584049 GPATCH8Q9UKJ3 1502 aaKnown RBP11.68□□□□□ -0.54
BDNF-219ENST00000584049 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
BDNF-219ENST00000584049 RALBP1Q15311 655 aa11.67□□□□□ -0.54
BDNF-219ENST00000584049 TMC1Q8TDI8 760 aa11.67□□□□□ -0.54
BDNF-219ENST00000584049 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
BDNF-219ENST00000584049 ANKRD50Q9ULJ7 1429 aa11.65□□□□□ -0.54
BDNF-219ENST00000584049 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
BDNF-219ENST00000584049 IFT140Q96RY7 1462 aa11.65□□□□□ -0.54
BDNF-219ENST00000584049 PKD2Q13563 968 aa11.65□□□□□ -0.54
BDNF-219ENST00000584049 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
BDNF-219ENST00000584049 CEP170Q5SW79 1584 aa11.65□□□□□ -0.54
BDNF-219ENST00000584049 INSRP06213 1382 aa11.65□□□□□ -0.55
BDNF-219ENST00000584049 ZMYM4Q5VZL5 1548 aa11.65□□□□□ -0.55
BDNF-219ENST00000584049 TCERG1O14776 1098 aaKnown RBP11.64□□□□□ -0.55
BDNF-219ENST00000584049 PDE3BQ13370 1112 aa11.64□□□□□ -0.55
BDNF-219ENST00000584049 PRG4Q92954 1404 aaPredicted RBP11.64□□□□□ -0.55
BDNF-219ENST00000584049 RRP1P56182 461 aaKnown RBP11.64□□□□□ -0.55
BDNF-219ENST00000584049 RTL5Q5HYW3 569 aaPredicted RBP11.64□□□□□ -0.55
BDNF-219ENST00000584049 ARID3CA6NKF2 412 aa11.63□□□□□ -0.55
BDNF-219ENST00000584049 GRIN2AQ12879 1464 aa11.63□□□□□ -0.55
BDNF-219ENST00000584049 PTPRGP23470 1445 aa11.62□□□□□ -0.55
BDNF-219ENST00000584049 MS4A1P11836 297 aa11.62□□□□□ -0.55
BDNF-219ENST00000584049 NBR1Q14596 966 aa11.62□□□□□ -0.55
BDNF-219ENST00000584049 CDC42BPAQ5VT25 1732 aa11.61□□□□□ -0.55
BDNF-219ENST00000584049 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
BDNF-219ENST00000584049 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
BDNF-219ENST00000584049 ZNF326Q5BKZ1 582 aaKnown RBP11.6□□□□□ -0.55
BDNF-219ENST00000584049 PARD3Q8TEW0 1356 aa11.6□□□□□ -0.55
BDNF-219ENST00000584049 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
BDNF-219ENST00000584049 NLRP13Q86W25 1043 aa11.59□□□□□ -0.55
BDNF-219ENST00000584049 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
BDNF-219ENST00000584049 NUP155O75694 1391 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms