RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ARHGEF40Q8TER5 1519 aa15.93■□□□□ 0.14
SKA2-208ENST00000583927 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
SKA2-208ENST00000583927 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
SKA2-208ENST00000583927 POGZQ7Z3K3 1410 aa15.9■□□□□ 0.14
SKA2-208ENST00000583927 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
SKA2-208ENST00000583927 SCAPERQ9BY12 1400 aa15.89■□□□□ 0.13
SKA2-208ENST00000583927 KDM5CP41229 1560 aa15.87■□□□□ 0.13
SKA2-208ENST00000583927 ADAMTSL3P82987 1691 aa15.87■□□□□ 0.13
SKA2-208ENST00000583927 BCORL1Q5H9F3 1711 aa15.87■□□□□ 0.13
SKA2-208ENST00000583927 ITSN2Q9NZM3 1697 aa15.86■□□□□ 0.13
SKA2-208ENST00000583927 ZNF518AQ6AHZ1 1483 aa15.86■□□□□ 0.13
SKA2-208ENST00000583927 ABCC1P33527 1531 aa15.85■□□□□ 0.13
SKA2-208ENST00000583927 ZFYVE16Q7Z3T8 1539 aa15.85■□□□□ 0.13
SKA2-208ENST00000583927 EHBP1L1Q8N3D4 1523 aa15.85■□□□□ 0.13
SKA2-208ENST00000583927 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
SKA2-208ENST00000583927 VPS8Q8N3P4 1428 aa15.84■□□□□ 0.13
SKA2-208ENST00000583927 MTUS2Q5JR59 1369 aa15.83■□□□□ 0.12
SKA2-208ENST00000583927 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.12
SKA2-208ENST00000583927 HECW2Q9P2P5 1572 aa15.82■□□□□ 0.12
SKA2-208ENST00000583927 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
SKA2-208ENST00000583927 SIGLEC1Q9BZZ2 1709 aa15.81■□□□□ 0.12
SKA2-208ENST00000583927 SAMD9LQ8IVG5 1584 aa15.8■□□□□ 0.12
SKA2-208ENST00000583927 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
SKA2-208ENST00000583927 YEATS2Q9ULM3 1422 aa15.8■□□□□ 0.12
SKA2-208ENST00000583927 SUPT6HQ7KZ85 1726 aaKnown RBP15.8■□□□□ 0.12
SKA2-208ENST00000583927 REREQ9P2R6 1566 aa15.79■□□□□ 0.12
SKA2-208ENST00000583927 MLH3Q9UHC1 1453 aa15.79■□□□□ 0.12
SKA2-208ENST00000583927 ARHGEF12Q9NZN5 1544 aa15.78■□□□□ 0.12
SKA2-208ENST00000583927 ATP10AO60312 1499 aa15.78■□□□□ 0.12
SKA2-208ENST00000583927 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
SKA2-208ENST00000583927 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.11
SKA2-208ENST00000583927 KIAA1107Q9UPP5 1409 aa15.77■□□□□ 0.11
SKA2-208ENST00000583927 CCNB3Q8WWL7 1395 aa15.76■□□□□ 0.11
SKA2-208ENST00000583927 C9orf84Q5VXU9 1444 aa15.76■□□□□ 0.11
SKA2-208ENST00000583927 MADDQ8WXG6 1647 aa15.76■□□□□ 0.11
SKA2-208ENST00000583927 DIP2CQ9Y2E4 1556 aa15.75■□□□□ 0.11
SKA2-208ENST00000583927 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
SKA2-208ENST00000583927 AFAP1Q8N556 730 aa15.74■□□□□ 0.11
SKA2-208ENST00000583927 ABCA6Q8N139 1617 aa15.74■□□□□ 0.11
SKA2-208ENST00000583927 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
SKA2-208ENST00000583927 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
SKA2-208ENST00000583927 PTPRMP28827 1452 aa15.72■□□□□ 0.11
SKA2-208ENST00000583927 LRRC9Q6ZRR7 1453 aa15.72■□□□□ 0.11
SKA2-208ENST00000583927 CFDP1Q9UEE9 299 aaPredicted RBP15.72■□□□□ 0.11
SKA2-208ENST00000583927 RIMS1Q86UR5 1692 aaKnown RBP15.72■□□□□ 0.11
SKA2-208ENST00000583927 NCOA2Q15596 1464 aa15.71■□□□□ 0.11
SKA2-208ENST00000583927 ARID4BQ4LE39 1312 aaPredicted RBP15.71■□□□□ 0.11
SKA2-208ENST00000583927 SENP3Q9H4L4 574 aaPredicted RBP15.71■□□□□ 0.11
SKA2-208ENST00000583927 AGLP35573 1532 aa15.7■□□□□ 0.1
SKA2-208ENST00000583927 INO80Q9ULG1 1556 aaPredicted RBP15.7■□□□□ 0.1
SKA2-208ENST00000583927 MBD5Q9P267 1494 aa15.67■□□□□ 0.1
SKA2-208ENST00000583927 SETD1BQ9UPS6 1966 aaKnown RBP15.67■□□□□ 0.1
SKA2-208ENST00000583927 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
SKA2-208ENST00000583927 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
SKA2-208ENST00000583927 ADGBQ8N7X0 1667 aa15.66■□□□□ 0.1
SKA2-208ENST00000583927 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
SKA2-208ENST00000583927 SPAG9O60271 1321 aaKnown RBP15.64■□□□□ 0.09
SKA2-208ENST00000583927 PLXNC1O60486 1568 aa15.63■□□□□ 0.09
SKA2-208ENST00000583927 ARHGEF5Q12774 1597 aa15.63■□□□□ 0.09
SKA2-208ENST00000583927 RTEL1-TNFRSF6BF6WH68 1400 aa15.63■□□□□ 0.09
SKA2-208ENST00000583927 RSPH4AQ5TD94 716 aa15.63■□□□□ 0.09
SKA2-208ENST00000583927 CAMSAP2Q08AD1 1489 aa15.63■□□□□ 0.09
SKA2-208ENST00000583927 MYT1LQ9UL68 1186 aa15.61■□□□□ 0.09
SKA2-208ENST00000583927 MIA2Q96PC5 1412 aa15.6■□□□□ 0.09
SKA2-208ENST00000583927 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
SKA2-208ENST00000583927 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
SKA2-208ENST00000583927 ZNF644Q9H582 1327 aaPredicted RBP15.6■□□□□ 0.09
SKA2-208ENST00000583927 MROH2AA6NES4 1674 aa15.59■□□□□ 0.09
SKA2-208ENST00000583927 MYOM3Q5VTT5 1437 aa15.59■□□□□ 0.09
SKA2-208ENST00000583927 A2MP01023 1474 aa15.58■□□□□ 0.08
SKA2-208ENST00000583927 C3P01024 1663 aa15.57■□□□□ 0.08
SKA2-208ENST00000583927 MAST1Q9Y2H9 1570 aa15.57■□□□□ 0.08
SKA2-208ENST00000583927 PREX1Q8TCU6 1659 aa15.57■□□□□ 0.08
SKA2-208ENST00000583927 APLP2Q06481 763 aa15.56■□□□□ 0.08
SKA2-208ENST00000583927 MLECQ14165 292 aa15.56■□□□□ 0.08
SKA2-208ENST00000583927 CNTLNQ9NXG0 1405 aa15.56■□□□□ 0.08
SKA2-208ENST00000583927 LMTK3Q96Q04 1460 aa15.55■□□□□ 0.08
SKA2-208ENST00000583927 PHF23Q9BUL5 403 aaPredicted RBP15.55■□□□□ 0.08
SKA2-208ENST00000583927 DHX29Q7Z478 1369 aaKnown RBP15.51■□□□□ 0.07
SKA2-208ENST00000583927 CROCC2H7BZ55 1655 aa15.51■□□□□ 0.07
SKA2-208ENST00000583927 PTPN23Q9H3S7 1636 aa15.51■□□□□ 0.07
SKA2-208ENST00000583927 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
SKA2-208ENST00000583927 FAM135AQ9P2D6 1515 aa15.51■□□□□ 0.07
SKA2-208ENST00000583927 CLTCQ00610 1675 aaKnown RBP15.5■□□□□ 0.07
SKA2-208ENST00000583927 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
SKA2-208ENST00000583927 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
SKA2-208ENST00000583927 TCOF1Q13428 1488 aaKnown RBP15.48■□□□□ 0.07
SKA2-208ENST00000583927 EIF2AK4Q9P2K8 1649 aaKnown RBP15.48■□□□□ 0.07
SKA2-208ENST00000583927 SHANK2Q9UPX8 1470 aa15.47■□□□□ 0.07
SKA2-208ENST00000583927 FGD6Q6ZV73 1430 aa15.47■□□□□ 0.07
SKA2-208ENST00000583927 ESF1Q9H501 851 aaKnown RBP15.47■□□□□ 0.07
SKA2-208ENST00000583927 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.07
SKA2-208ENST00000583927 RNF17Q9BXT8 1623 aaKnown RBP15.46■□□□□ 0.06
SKA2-208ENST00000583927 NPATQ14207 1427 aa15.45■□□□□ 0.06
SKA2-208ENST00000583927 CEBPAP49715 358 aaPredicted RBP15.43■□□□□ 0.06
SKA2-208ENST00000583927 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
SKA2-208ENST00000583927 UHRF1BP1Q6BDS2 1440 aa15.43■□□□□ 0.06
SKA2-208ENST00000583927 ZC3H13Q5T200 1668 aaKnown RBP15.42■□□□□ 0.06
SKA2-208ENST00000583927 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
SKA2-208ENST00000583927 KDM5DQ9BY66 1539 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms