RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 PLB1Q6P1J6 1458 aa9.3□□□□□ -0.92
VAPA-207ENST00000583879 UACAQ9BZF9 1416 aa9.3□□□□□ -0.92
VAPA-207ENST00000583879 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
VAPA-207ENST00000583879 ILDR1Q86SU0 546 aaPredicted RBP9.29□□□□□ -0.92
VAPA-207ENST00000583879 CUL7Q14999 1698 aa9.28□□□□□ -0.92
VAPA-207ENST00000583879 UHRF1BP1LA0JNW5 1464 aa9.28□□□□□ -0.92
VAPA-207ENST00000583879 GLI2P10070 1586 aa9.26□□□□□ -0.93
VAPA-207ENST00000583879 COL17A1Q9UMD9 1497 aaPredicted RBP9.26□□□□□ -0.93
VAPA-207ENST00000583879 TSPOAP1O95153 1857 aa9.25□□□□□ -0.93
VAPA-207ENST00000583879 GALR2O43603 387 aaPredicted RBP9.25□□□□□ -0.93
VAPA-207ENST00000583879 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
VAPA-207ENST00000583879 DISP1Q96F81 1524 aa9.24□□□□□ -0.93
VAPA-207ENST00000583879 KDM5BQ9UGL1 1544 aa9.24□□□□□ -0.93
VAPA-207ENST00000583879 IQGAP2Q13576 1575 aa9.23□□□□□ -0.93
VAPA-207ENST00000583879 ADGRL1O94910 1474 aa9.22□□□□□ -0.93
VAPA-207ENST00000583879 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
VAPA-207ENST00000583879 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.94
VAPA-207ENST00000583879 KCNH8Q96L42 1107 aa9.2□□□□□ -0.94
VAPA-207ENST00000583879 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
VAPA-207ENST00000583879 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
VAPA-207ENST00000583879 PHF12Q96QT6 1004 aa9.19□□□□□ -0.94
VAPA-207ENST00000583879 CD109Q6YHK3 1445 aa9.17□□□□□ -0.94
VAPA-207ENST00000583879 MAP3K4Q9Y6R4 1608 aa9.16□□□□□ -0.94
VAPA-207ENST00000583879 WDR7Q9Y4E6 1490 aa9.16□□□□□ -0.94
VAPA-207ENST00000583879 MNX1P50219 401 aaPredicted RBP9.15□□□□□ -0.94
VAPA-207ENST00000583879 FAM9AQ8IZU1 332 aaPredicted RBP9.15□□□□□ -0.94
VAPA-207ENST00000583879 ZCCHC11Q5TAX3 1644 aaKnown RBP9.15□□□□□ -0.94
VAPA-207ENST00000583879 KIAA0556O60303 1618 aa9.14□□□□□ -0.95
VAPA-207ENST00000583879 MAGI3Q5TCQ9 1506 aa9.14□□□□□ -0.95
VAPA-207ENST00000583879 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
VAPA-207ENST00000583879 HECW2Q9P2P5 1572 aa9.12□□□□□ -0.95
VAPA-207ENST00000583879 OTUD5Q96G74 571 aa9.12□□□□□ -0.95
VAPA-207ENST00000583879 PLSCR2Q9NRY7 297 aa9.12□□□□□ -0.95
VAPA-207ENST00000583879 ARID3CA6NKF2 412 aa9.1□□□□□ -0.95
VAPA-207ENST00000583879 P3H3Q8IVL6 736 aa9.1□□□□□ -0.95
VAPA-207ENST00000583879 ABCA8O94911 1581 aa9.09□□□□□ -0.95
VAPA-207ENST00000583879 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
VAPA-207ENST00000583879 PHLDB1Q86UU1 1377 aa9.09□□□□□ -0.95
VAPA-207ENST00000583879 PRXQ9BXM0 1461 aa9.08□□□□□ -0.96
VAPA-207ENST00000583879 RAPGEF3O95398 923 aa9.08□□□□□ -0.96
VAPA-207ENST00000583879 FBXO41Q8TF61 875 aa9.08□□□□□ -0.96
VAPA-207ENST00000583879 ATP10BO94823 1461 aa9.08□□□□□ -0.96
VAPA-207ENST00000583879 ARAP3Q8WWN8 1544 aa9.07□□□□□ -0.96
VAPA-207ENST00000583879 PELP1Q8IZL8 1130 aaKnown RBP9.07□□□□□ -0.96
VAPA-207ENST00000583879 MS4A3Q96HJ5 214 aa9.06□□□□□ -0.96
VAPA-207ENST00000583879 CFAP43Q8NDM7 1665 aa9.06□□□□□ -0.96
VAPA-207ENST00000583879 ASTLQ6HA08 431 aaPredicted RBP9.04□□□□□ -0.96
VAPA-207ENST00000583879 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
VAPA-207ENST00000583879 C7P10643 843 aa9.03□□□□□ -0.96
VAPA-207ENST00000583879 SLC39A7Q92504 469 aa9.03□□□□□ -0.96
VAPA-207ENST00000583879 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
VAPA-207ENST00000583879 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
VAPA-207ENST00000583879 PTPRMP28827 1452 aa9.02□□□□□ -0.96
VAPA-207ENST00000583879 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
VAPA-207ENST00000583879 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
VAPA-207ENST00000583879 PLEKHD1A6NEE1 506 aa9.01□□□□□ -0.97
VAPA-207ENST00000583879 PROM2Q8N271 834 aa9.01□□□□□ -0.97
VAPA-207ENST00000583879 NEO1Q92859 1461 aa9.01□□□□□ -0.97
VAPA-207ENST00000583879 KIF21BO75037 1637 aa9□□□□□ -0.97
VAPA-207ENST00000583879 POTEMA6NI47 508 aa8.99□□□□□ -0.97
VAPA-207ENST00000583879 PLEKHG5O94827 1062 aa8.99□□□□□ -0.97
VAPA-207ENST00000583879 RANGAP1P46060 587 aaPredicted RBP8.99□□□□□ -0.97
VAPA-207ENST00000583879 ABCA9Q8IUA7 1624 aa8.98□□□□□ -0.97
VAPA-207ENST00000583879 ADAMTSL3P82987 1691 aa8.97□□□□□ -0.97
VAPA-207ENST00000583879 MAMSTRQ6ZN01 415 aa8.97□□□□□ -0.97
VAPA-207ENST00000583879 CCDC61Q9Y6R9 512 aa8.97□□□□□ -0.97
VAPA-207ENST00000583879 DENND4BO75064 1496 aaPredicted RBP8.96□□□□□ -0.97
VAPA-207ENST00000583879 AKNAQ7Z591 1439 aa8.96□□□□□ -0.98
VAPA-207ENST00000583879 NUP153P49790 1475 aaKnown RBP8.96□□□□□ -0.98
VAPA-207ENST00000583879 HSPA2P54652 639 aa8.95□□□□□ -0.98
VAPA-207ENST00000583879 POTEGQ6S5H5 508 aa8.95□□□□□ -0.98
VAPA-207ENST00000583879 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
VAPA-207ENST00000583879 KIF12Q96FN5 646 aa8.94□□□□□ -0.98
VAPA-207ENST00000583879 FHOD3Q2V2M9 1422 aa8.94□□□□□ -0.98
VAPA-207ENST00000583879 LMTK3Q96Q04 1460 aa8.94□□□□□ -0.98
VAPA-207ENST00000583879 SAMD9Q5K651 1589 aa8.94□□□□□ -0.98
VAPA-207ENST00000583879 RAPGEF6Q8TEU7 1601 aa8.94□□□□□ -0.98
VAPA-207ENST00000583879 MLECQ14165 292 aa8.93□□□□□ -0.98
VAPA-207ENST00000583879 MIER1Q8N108 512 aa8.93□□□□□ -0.98
VAPA-207ENST00000583879 POGZQ7Z3K3 1410 aa8.93□□□□□ -0.98
VAPA-207ENST00000583879 PCF11O94913 1555 aaKnown RBP8.93□□□□□ -0.98
VAPA-207ENST00000583879 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 FRMPD1Q5SYB0 1578 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 FANCAO15360 1455 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 POTEJP0CG39 1038 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 CERKQ8TCT0 537 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 SCUBE2Q9NQ36 999 aa8.92□□□□□ -0.98
VAPA-207ENST00000583879 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
VAPA-207ENST00000583879 EEA1Q15075 1411 aa8.9□□□□□ -0.98
VAPA-207ENST00000583879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.9□□□□□ -0.99
VAPA-207ENST00000583879 MAGI2Q86UL8 1455 aa8.89□□□□□ -0.99
VAPA-207ENST00000583879 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
VAPA-207ENST00000583879 YEATS2Q9ULM3 1422 aa8.89□□□□□ -0.99
VAPA-207ENST00000583879 EFCAB2Q5VUJ9 269 aa8.89□□□□□ -0.99
VAPA-207ENST00000583879 PLCH2O75038 1416 aa8.88□□□□□ -0.99
VAPA-207ENST00000583879 MAP3K13O43283 966 aa8.88□□□□□ -0.99
VAPA-207ENST00000583879 BMP2KQ9NSY1 1161 aaPredicted RBP8.88□□□□□ -0.99
VAPA-207ENST00000583879 PCDH10Q9P2E7 1040 aa8.88□□□□□ -0.99
VAPA-207ENST00000583879 ATP1B4Q9UN42 357 aaPredicted RBP8.88□□□□□ -0.99
VAPA-207ENST00000583879 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms