RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, humanhuman

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-217ENST00000583705 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
MSI2-217ENST00000583705 SUPT16HQ9Y5B9 1047 aaKnown RBP14.43□□□□□ -0.1
MSI2-217ENST00000583705 FRAT2O75474 233 aaPredicted RBP14.42□□□□□ -0.1
MSI2-217ENST00000583705 RASSF8Q8NHQ8 419 aa14.42□□□□□ -0.1
MSI2-217ENST00000583705 RAD21O60216 631 aa14.41□□□□□ -0.1
MSI2-217ENST00000583705 CFDP1Q9UEE9 299 aaPredicted RBP14.41□□□□□ -0.1
MSI2-217ENST00000583705 MCCP23508 829 aa14.41□□□□□ -0.1
MSI2-217ENST00000583705 MIER1Q8N108 512 aa14.4□□□□□ -0.1
MSI2-217ENST00000583705 GTF2E1P29083 439 aaPredicted RBP14.39□□□□□ -0.11
MSI2-217ENST00000583705 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
MSI2-217ENST00000583705 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
MSI2-217ENST00000583705 HSCBQ8IWL3 235 aa14.38□□□□□ -0.11
MSI2-217ENST00000583705 B4GALNT3Q6L9W6 998 aa14.37□□□□□ -0.11
MSI2-217ENST00000583705 MARCH6O60337 910 aa14.37□□□□□ -0.11
MSI2-217ENST00000583705 TOMM22Q9NS69 142 aa14.37□□□□□ -0.11
MSI2-217ENST00000583705 ERCC6Q03468 1493 aa14.36□□□□□ -0.11
MSI2-217ENST00000583705 GGT6Q6P531 493 aa14.36□□□□□ -0.11
MSI2-217ENST00000583705 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
MSI2-217ENST00000583705 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
MSI2-217ENST00000583705 HDGFP51858 240 aaKnown RBP14.34□□□□□ -0.11
MSI2-217ENST00000583705 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
MSI2-217ENST00000583705 MEX3CQ5U5Q3 659 aaKnown RBP14.33□□□□□ -0.11
MSI2-217ENST00000583705 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
MSI2-217ENST00000583705 CEP89Q96ST8 783 aa14.33□□□□□ -0.12
MSI2-217ENST00000583705 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
MSI2-217ENST00000583705 MORC1Q86VD1 984 aa14.32□□□□□ -0.12
MSI2-217ENST00000583705 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
MSI2-217ENST00000583705 PES1O00541 588 aaKnown RBP14.32□□□□□ -0.12
MSI2-217ENST00000583705 CHMP4BQ9H444 224 aaKnown RBP14.32□□□□□ -0.12
MSI2-217ENST00000583705 CWC22Q9HCG8 908 aaKnown RBP14.31□□□□□ -0.12
MSI2-217ENST00000583705 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
MSI2-217ENST00000583705 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
MSI2-217ENST00000583705 DCAF11Q8TEB1 546 aa14.29□□□□□ -0.12
MSI2-217ENST00000583705 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
MSI2-217ENST00000583705 GZF1Q9H116 711 aaPredicted RBP14.28□□□□□ -0.12
MSI2-217ENST00000583705 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
MSI2-217ENST00000583705 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.12
MSI2-217ENST00000583705 SLC4A10Q6U841 1118 aa14.27□□□□□ -0.13
MSI2-217ENST00000583705 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.13
MSI2-217ENST00000583705 MS4A1P11836 297 aa14.26□□□□□ -0.13
MSI2-217ENST00000583705 EVA1CP58658 441 aa14.25□□□□□ -0.13
MSI2-217ENST00000583705 TRIM34Q9BYJ4 488 aa14.25□□□□□ -0.13
MSI2-217ENST00000583705 KANK1Q14678 1352 aa14.24□□□□□ -0.13
MSI2-217ENST00000583705 ITPRIPQ8IWB1 547 aa14.24□□□□□ -0.13
MSI2-217ENST00000583705 HDGFL2Q7Z4V5 671 aaPredicted RBP14.24□□□□□ -0.13
MSI2-217ENST00000583705 NGEFQ8N5V2 710 aa14.23□□□□□ -0.13
MSI2-217ENST00000583705 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
MSI2-217ENST00000583705 FOXD4L5Q5VV16 416 aaPredicted RBP14.23□□□□□ -0.13
MSI2-217ENST00000583705 FOXD4L4Q8WXT5 416 aaPredicted RBP14.23□□□□□ -0.13
MSI2-217ENST00000583705 TMF1P82094 1093 aa14.22□□□□□ -0.13
MSI2-217ENST00000583705 SYTL4Q96C24 671 aaPredicted RBP14.22□□□□□ -0.13
MSI2-217ENST00000583705 TPM4P67936 248 aa14.21□□□□□ -0.13
MSI2-217ENST00000583705 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.14
MSI2-217ENST00000583705 DCAF8L1A6NGE4 600 aa14.2□□□□□ -0.14
MSI2-217ENST00000583705 GPATCH3Q96I76 525 aa14.2□□□□□ -0.14
MSI2-217ENST00000583705 EIF4G1Q04637 1599 aaKnown RBP14.19□□□□□ -0.14
MSI2-217ENST00000583705 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
MSI2-217ENST00000583705 U2AF1L5P0DN76 240 aaPredicted RBP14.19□□□□□ -0.14
MSI2-217ENST00000583705 U2AF1Q01081 240 aaKnown RBP eCLIP14.19□□□□□ -0.14
MSI2-217ENST00000583705 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
MSI2-217ENST00000583705 TPD52L1Q16890 204 aaPredicted RBP14.18□□□□□ -0.14
MSI2-217ENST00000583705 GOLGA6L1Q8N7Z2 621 aa14.18□□□□□ -0.14
MSI2-217ENST00000583705 PPP1R1BQ9UD71 204 aaPredicted RBP14.17□□□□□ -0.14
MSI2-217ENST00000583705 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
MSI2-217ENST00000583705 SPAG9O60271 1321 aaKnown RBP14.16□□□□□ -0.14
MSI2-217ENST00000583705 STK31Q9BXU1 1019 aa14.16□□□□□ -0.14
MSI2-217ENST00000583705 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.16□□□□□ -0.14
MSI2-217ENST00000583705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.16□□□□□ -0.14
MSI2-217ENST00000583705 AMPHP49418 695 aa14.15□□□□□ -0.14
MSI2-217ENST00000583705 TNNT3P45378 269 aaPredicted RBP14.15□□□□□ -0.14
MSI2-217ENST00000583705 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
MSI2-217ENST00000583705 FOXD4L6Q3SYB3 417 aaPredicted RBP14.14□□□□□ -0.15
MSI2-217ENST00000583705 FOXD4L3Q6VB84 417 aaPredicted RBP14.14□□□□□ -0.15
MSI2-217ENST00000583705 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
MSI2-217ENST00000583705 DHX16O60231 1041 aaKnown RBP14.14□□□□□ -0.15
MSI2-217ENST00000583705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.15
MSI2-217ENST00000583705 SF3A1Q15459 793 aaKnown RBP14.13□□□□□ -0.15
MSI2-217ENST00000583705 MFAP1P55081 439 aaKnown RBP14.12□□□□□ -0.15
MSI2-217ENST00000583705 CCAR2Q8N163 923 aaKnown RBP14.12□□□□□ -0.15
MSI2-217ENST00000583705 CLIP1P30622 1438 aa14.12□□□□□ -0.15
MSI2-217ENST00000583705 TPM3P06753 285 aa14.12□□□□□ -0.15
MSI2-217ENST00000583705 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
MSI2-217ENST00000583705 EID1Q9Y6B2 187 aa14.11□□□□□ -0.15
MSI2-217ENST00000583705 IPO8O15397 1037 aaKnown RBP14.11□□□□□ -0.15
MSI2-217ENST00000583705 FOXD1Q16676 465 aa14.1□□□□□ -0.15
MSI2-217ENST00000583705 NOL10Q9BSC4 688 aaKnown RBP14.1□□□□□ -0.15
MSI2-217ENST00000583705 PCMTD1Q96MG8 357 aaPredicted RBP14.09□□□□□ -0.15
MSI2-217ENST00000583705 AKAP17AQ02040 695 aaKnown RBP14.09□□□□□ -0.15
MSI2-217ENST00000583705 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
MSI2-217ENST00000583705 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
MSI2-217ENST00000583705 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.16
MSI2-217ENST00000583705 H3BQV1 296 aa14.07□□□□□ -0.16
MSI2-217ENST00000583705 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
MSI2-217ENST00000583705 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
MSI2-217ENST00000583705 RILPL2Q969X0 211 aa14.06□□□□□ -0.16
MSI2-217ENST00000583705 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
MSI2-217ENST00000583705 SMC4Q9NTJ3 1288 aa14.06□□□□□ -0.16
MSI2-217ENST00000583705 NECTIN2Q92692 538 aa14.06□□□□□ -0.16
MSI2-217ENST00000583705 CCDC43Q96MW1 224 aaKnown RBP14.06□□□□□ -0.16
MSI2-217ENST00000583705 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms